RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 RARBP10826 455 aa16.13■□□□□ 0.17
C9orf47-201ENST00000334490 TBXAS1P24557 533 aaPredicted RBP16.13■□□□□ 0.17
C9orf47-201ENST00000334490 JRKLQ9Y4A0 524 aa16.13■□□□□ 0.17
C9orf47-201ENST00000334490 POLR1AO95602 1720 aaPredicted RBP16.13■□□□□ 0.17
C9orf47-201ENST00000334490 MAGEB2O15479 319 aa16.13■□□□□ 0.17
C9orf47-201ENST00000334490 PRKCEQ02156 737 aa16.13■□□□□ 0.17
C9orf47-201ENST00000334490 PLCB4Q15147 1175 aa16.13■□□□□ 0.17
C9orf47-201ENST00000334490 SMAP1Q8IYB5 467 aaPredicted RBP16.13■□□□□ 0.17
C9orf47-201ENST00000334490 CDKL2Q92772 493 aa16.13■□□□□ 0.17
C9orf47-201ENST00000334490 ACAP3Q96P50 834 aa16.13■□□□□ 0.17
C9orf47-201ENST00000334490 EMSYQ7Z589 1322 aa16.13■□□□□ 0.17
C9orf47-201ENST00000334490 ESYT2A0FGR8 921 aa16.13■□□□□ 0.17
C9orf47-201ENST00000334490 LRRC53A6NM62 1247 aa16.13■□□□□ 0.17
C9orf47-201ENST00000334490 BUB1BO60566 1050 aaPredicted RBP16.13■□□□□ 0.17
C9orf47-201ENST00000334490 SRGAP2BP0DMP2 458 aa16.13■□□□□ 0.17
C9orf47-201ENST00000334490 KCNB1Q14721 858 aa16.13■□□□□ 0.17
C9orf47-201ENST00000334490 PPP6R3Q5H9R7 873 aaPredicted RBP16.13■□□□□ 0.17
C9orf47-201ENST00000334490 LMBRD2Q68DH5 695 aaPredicted RBP16.13■□□□□ 0.17
C9orf47-201ENST00000334490 PTF1AQ7RTS3 328 aa16.13■□□□□ 0.17
C9orf47-201ENST00000334490 TIPINQ9BVW5 301 aa16.13■□□□□ 0.17
C9orf47-201ENST00000334490 IPO11Q9UI26 975 aaKnown RBP16.13■□□□□ 0.17
C9orf47-201ENST00000334490 SEMA3FQ13275 785 aa16.12■□□□□ 0.17
C9orf47-201ENST00000334490 PLA2G4FQ68DD2 849 aa16.12■□□□□ 0.17
C9orf47-201ENST00000334490 XRRA1Q6P2D8 792 aa16.12■□□□□ 0.17
C9orf47-201ENST00000334490 C11orf70Q9BRQ4 267 aa16.12■□□□□ 0.17
C9orf47-201ENST00000334490 TMEM60Q9H2L4 133 aa16.12■□□□□ 0.17
C9orf47-201ENST00000334490 ZWILCHQ9H900 591 aa16.12■□□□□ 0.17
C9orf47-201ENST00000334490 HPS5Q9UPZ3 1129 aa16.12■□□□□ 0.17
C9orf47-201ENST00000334490 BNIP3LO60238 219 aa16.12■□□□□ 0.17
C9orf47-201ENST00000334490 HOXA10P31260 410 aaPredicted RBP16.12■□□□□ 0.17
C9orf47-201ENST00000334490 GBP1P32455 592 aa16.12■□□□□ 0.17
C9orf47-201ENST00000334490 STX2P32856 288 aa16.12■□□□□ 0.17
C9orf47-201ENST00000334490 SF3A3Q12874 501 aaKnown RBP eCLIP16.12■□□□□ 0.17
C9orf47-201ENST00000334490 MOV10L1Q9BXT6 1211 aaKnown RBP16.12■□□□□ 0.17
C9orf47-201ENST00000334490 EHD4Q9H223 541 aa16.12■□□□□ 0.17
C9orf47-201ENST00000334490 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.12■□□□□ 0.17
C9orf47-201ENST00000334490 ANAPC7Q9UJX3 599 aa16.12■□□□□ 0.17
C9orf47-201ENST00000334490 ANAPC5Q9UJX4 755 aa16.12■□□□□ 0.17
C9orf47-201ENST00000334490 ARHGEF28Q8N1W1 1705 aaKnown RBP16.12■□□□□ 0.17
C9orf47-201ENST00000334490 PDXKO00764 312 aa16.12■□□□□ 0.17
C9orf47-201ENST00000334490 CDC42EP1Q00587 391 aa16.12■□□□□ 0.17
C9orf47-201ENST00000334490 DRAP1Q14919 205 aaPredicted RBP16.12■□□□□ 0.17
C9orf47-201ENST00000334490 FBXL13Q8NEE6 735 aa16.12■□□□□ 0.17
C9orf47-201ENST00000334490 REEP2Q9BRK0 252 aa16.12■□□□□ 0.17
C9orf47-201ENST00000334490 A8MXQ7 604 aa16.12■□□□□ 0.17
C9orf47-201ENST00000334490 SLC4A1P02730 911 aa16.12■□□□□ 0.17
C9orf47-201ENST00000334490 TMEM62Q0P6H9 643 aa16.12■□□□□ 0.17
C9orf47-201ENST00000334490 ARHGEF18Q6ZSZ5 1173 aa16.12■□□□□ 0.17
C9orf47-201ENST00000334490 USP49Q70CQ1 688 aa16.12■□□□□ 0.17
C9orf47-201ENST00000334490 FAM83AQ86UY5 434 aa16.12■□□□□ 0.17
C9orf47-201ENST00000334490 METTL16Q86W50 562 aaKnown RBP16.12■□□□□ 0.17
C9orf47-201ENST00000334490 CCDC13Q8IYE1 715 aa16.12■□□□□ 0.17
C9orf47-201ENST00000334490 SKA2Q8WVK7 121 aaPredicted RBP16.12■□□□□ 0.17
C9orf47-201ENST00000334490 AKT1S1Q96B36 256 aa16.12■□□□□ 0.17
C9orf47-201ENST00000334490 INTS2Q9H0H0 1204 aaKnown RBP16.12■□□□□ 0.17
C9orf47-201ENST00000334490 FAM205AQ6ZU69 1335 aa16.12■□□□□ 0.17
C9orf47-201ENST00000334490 A6NNZ2 444 aa16.11■□□□□ 0.17
C9orf47-201ENST00000334490 ECEL1O95672 775 aa16.11■□□□□ 0.17
C9orf47-201ENST00000334490 BASP1P80723 227 aaKnown RBP16.11■□□□□ 0.17
C9orf47-201ENST00000334490 TUBB8Q3ZCM7 444 aa16.11■□□□□ 0.17
C9orf47-201ENST00000334490 RWDD4Q6NW29 188 aaKnown RBP16.11■□□□□ 0.17
C9orf47-201ENST00000334490 TMX2Q9Y320 296 aa16.11■□□□□ 0.17
C9orf47-201ENST00000334490 COL3A1P02461 1466 aaPredicted RBP16.11■□□□□ 0.17
C9orf47-201ENST00000334490 CTDNEP1O95476 244 aa16.11■□□□□ 0.17
C9orf47-201ENST00000334490 HSPA6P17066 643 aa16.11■□□□□ 0.17
C9orf47-201ENST00000334490 TOGARAM2Q6ZUX3 1019 aa16.11■□□□□ 0.17
C9orf47-201ENST00000334490 RPUSD2Q8IZ73 545 aaKnown RBP16.11■□□□□ 0.17
C9orf47-201ENST00000334490 GIMAP7Q8NHV1 300 aa16.11■□□□□ 0.17
C9orf47-201ENST00000334490 EMC2Q15006 297 aa16.11■□□□□ 0.17
C9orf47-201ENST00000334490 PBKQ96KB5 322 aa16.11■□□□□ 0.17
C9orf47-201ENST00000334490 ERAP1Q9NZ08 941 aa16.11■□□□□ 0.17
C9orf47-201ENST00000334490 MAGED2Q9UNF1 606 aaPredicted RBP16.11■□□□□ 0.17
C9orf47-201ENST00000334490 UBE4BO95155 1302 aa16.11■□□□□ 0.17
C9orf47-201ENST00000334490 NWD1Q149M9 1564 aa16.11■□□□□ 0.17
C9orf47-201ENST00000334490 WNT10BO00744 389 aa16.11■□□□□ 0.17
C9orf47-201ENST00000334490 IER5Q5VY09 327 aa16.11■□□□□ 0.17
C9orf47-201ENST00000334490 ANKRD40Q6AI12 368 aa16.11■□□□□ 0.17
C9orf47-201ENST00000334490 SARM1Q6SZW1 724 aa16.11■□□□□ 0.17
C9orf47-201ENST00000334490 HOMER3Q9NSC5 361 aa16.11■□□□□ 0.17
C9orf47-201ENST00000334490 FNDC3AQ9Y2H6 1198 aaKnown RBP16.11■□□□□ 0.17
C9orf47-201ENST00000334490 RICTORQ6R327 1708 aa16.11■□□□□ 0.17
C9orf47-201ENST00000334490 M0QYV0 167 aa16.1■□□□□ 0.17
C9orf47-201ENST00000334490 HEXIM1O94992 359 aaKnown RBP16.1■□□□□ 0.17
C9orf47-201ENST00000334490 CYP2C9P11712 490 aa16.1■□□□□ 0.17
C9orf47-201ENST00000334490 ACOT2P49753 483 aa16.1■□□□□ 0.17
C9orf47-201ENST00000334490 PLTPP55058 493 aa16.1■□□□□ 0.17
C9orf47-201ENST00000334490 FCGRTP55899 365 aa16.1■□□□□ 0.17
C9orf47-201ENST00000334490 RWDD2BP57060 319 aa16.1■□□□□ 0.17
C9orf47-201ENST00000334490 HSPH1Q92598 858 aa16.1■□□□□ 0.17
C9orf47-201ENST00000334490 PDE1BQ01064 536 aa16.1■□□□□ 0.17
C9orf47-201ENST00000334490 VSIG1Q86XK7 387 aa16.1■□□□□ 0.17
C9orf47-201ENST00000334490 SCYL1Q96KG9 808 aa16.1■□□□□ 0.17
C9orf47-201ENST00000334490 ZNF560Q96MR9 790 aa16.1■□□□□ 0.17
C9orf47-201ENST00000334490 LRRC4BQ9NT99 713 aa16.1■□□□□ 0.17
C9orf47-201ENST00000334490 NPEPPSP55786 919 aa16.1■□□□□ 0.17
C9orf47-201ENST00000334490 KYAT1Q16773 422 aa16.1■□□□□ 0.17
C9orf47-201ENST00000334490 RNF14Q9UBS8 474 aa16.1■□□□□ 0.17
C9orf47-201ENST00000334490 PPP2R3BQ9Y5P8 575 aa16.1■□□□□ 0.17
C9orf47-201ENST00000334490 POC1B-GALNT4F8VUJ3 575 aa16.1■□□□□ 0.17
C9orf47-201ENST00000334490 GNA15P30679 374 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms