RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 HMOX2P30519 316 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 TTMPQ5BVD1 217 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 PET117Q6UWS5 81 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 BEST2Q8NFU1 509 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 CYP4F12Q9HCS2 524 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 PSD3Q9NYI0 1048 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 RGS16O15492 202 aaPredicted RBP6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 SGSM2O43147 1006 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 GPC3P51654 580 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 GMFBP60983 142 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 SGSM1Q2NKQ1 1148 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 PLEKHO1Q53GL0 409 aaPredicted RBP6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 SCAIQ8N9R8 606 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 PPWD1Q96BP3 646 aaKnown RBP6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 EDC3Q96F86 508 aaKnown RBP6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 ZFYVE19Q96K21 471 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 SCYL1Q96KG9 808 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 CHPF2Q9P2E5 772 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 TRIM10Q9UDY6 481 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 KIF24Q5T7B8 1368 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 J3QR89 54 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 AKAP8O43823 692 aaKnown RBP6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 MRPS10P82664 201 aaKnown RBP6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 LGALS3BPQ08380 585 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 NFIL3Q16649 462 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 TMEM63BQ5T3F8 832 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 LRRC6Q86X45 466 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 SCFD1Q8WVM8 642 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 RILPQ96NA2 401 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 NEDD4LQ96PU5 975 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 LZTS2Q9BRK4 669 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 PDE11AQ9HCR9 933 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 MYO1AQ9UBC5 1043 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 AXIN2Q9Y2T1 843 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 TRIM64CA6NLI5 447 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 BRD1O95696 1058 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 BMP15O95972 392 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 ZNF165P49910 485 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 VWA3BQ502W6 1294 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 GRK7Q8WTQ7 553 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 PPP1R13BQ96KQ4 1090 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 ZSCAN32Q9NX65 697 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 CENPXA8MT69 81 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 ADCY8P40145 1251 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 KPNA2P52292 529 aaKnown RBP6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 MCCD1P59942 119 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 MDM2Q00987 491 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 ITIH3Q06033 890 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 MMEL1Q495T6 779 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 ARHGEF18Q6ZSZ5 1173 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 SHCBP1Q8NEM2 672 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 TRPV1Q8NER1 839 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 PPHLN1Q8NEY8 458 aaKnown RBP6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 RNF217Q8TC41 542 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 ADNPQ9H2P0 1102 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 ORC3Q9UBD5 711 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 H0Y3Z8 333 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 PPP1R37O75864 691 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 MOCS2O96007 188 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 VCLP18206 1134 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 CDH2P19022 906 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 ODR4Q5SWX8 454 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 TWF2Q6IBS0 349 aaKnown RBP6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 RBM12BQ8IXT5 1001 aaKnown RBP6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 MRRFQ96E11 262 aaKnown RBP6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 RNF31Q96EP0 1072 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 SPEF1Q9Y4P9 236 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 TEX46H3BTG2 121 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 TRIM24O15164 1050 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 ITGB3P05106 788 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 PABPC1P11940 636 aaKnown RBP6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 CTCFP49711 727 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 ATP5IP56385 69 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 MDH1BQ5I0G3 518 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 INTS6LQ5JSJ4 861 aaKnown RBP6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 FAM43BQ6ZT52 329 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 TAF8Q7Z7C8 310 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 JADE3Q92613 823 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 AIFM2Q9BRQ8 373 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 TMEM60Q9H2L4 133 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 ABCB10Q9NRK6 738 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 MCM8Q9UJA3 840 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 SNX7Q9UNH6 387 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 LMTK3Q96Q04 1460 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 BTBD11A6QL63 1104 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 HLA-DPA1P20036 260 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 ILF3Q12906 894 aaKnown RBP eCLIP6.44□□□□□ -1.383e-7■■■■■ 31.9
CDC42BPA-201ENST00000334218 C2CD6Q53TS8 623 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 ZNF654Q8IZM8 581 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 TTC39CQ8N584 583 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 MAGEA13PA6NCF6 341 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 MATN2O00339 956 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 NOS1APO75052 506 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 PLCG1P19174 1290 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 SLC9A1P19634 815 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 RXRAP19793 462 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 RBM5P52756 815 aaKnown RBP eCLIP6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 CYP4F2P78329 520 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 CYP4F3Q08477 520 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 CCDC51Q96ER9 411 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms