RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 CSDE1O75534 798 aaKnown RBP28.75■■■□□ 2.19
SMDT1-201ENST00000331479 CDC42EP1Q00587 391 aa28.75■■■□□ 2.19
SMDT1-201ENST00000331479 ZNF410Q86VK4 478 aa28.75■■■□□ 2.19
SMDT1-201ENST00000331479 ZNF710Q8N1W2 664 aa28.75■■■□□ 2.19
SMDT1-201ENST00000331479 KIFAP3Q92845 792 aa28.75■■■□□ 2.19
SMDT1-201ENST00000331479 GDF15Q99988 308 aa28.75■■■□□ 2.19
SMDT1-201ENST00000331479 NOC2LQ9Y3T9 749 aaKnown RBP28.75■■■□□ 2.19
SMDT1-201ENST00000331479 ACTN4O43707 911 aaKnown RBP28.75■■■□□ 2.19
SMDT1-201ENST00000331479 PRPF40AO75400 957 aaKnown RBP28.75■■■□□ 2.19
SMDT1-201ENST00000331479 GIT2Q14161 759 aa28.75■■■□□ 2.19
SMDT1-201ENST00000331479 TCTN1Q2MV58 587 aa28.75■■■□□ 2.19
SMDT1-201ENST00000331479 PYM1Q9BRP8 204 aaKnown RBP28.75■■■□□ 2.19
SMDT1-201ENST00000331479 TIPINQ9BVW5 301 aa28.75■■■□□ 2.19
SMDT1-201ENST00000331479 DARSP14868 501 aaKnown RBP28.74■■■□□ 2.19
SMDT1-201ENST00000331479 DYMQ7RTS9 669 aa28.74■■■□□ 2.19
SMDT1-201ENST00000331479 DDX12PQ92771 950 aa28.74■■■□□ 2.19
SMDT1-201ENST00000331479 TNMDQ9H2S6 317 aa28.74■■■□□ 2.19
SMDT1-201ENST00000331479 KRT18P05783 430 aaKnown RBP28.73■■■□□ 2.19
SMDT1-201ENST00000331479 SLFN14P0C7P3 912 aa28.73■■■□□ 2.19
SMDT1-201ENST00000331479 EIF4BP23588 611 aaKnown RBP28.73■■■□□ 2.19
SMDT1-201ENST00000331479 CD52P31358 61 aa28.73■■■□□ 2.19
SMDT1-201ENST00000331479 PLEKHG4Q58EX7 1191 aa28.73■■■□□ 2.19
SMDT1-201ENST00000331479 TSHZ1Q6ZSZ6 1077 aa28.73■■■□□ 2.19
SMDT1-201ENST00000331479 RPUSD2Q8IZ73 545 aaKnown RBP28.73■■■□□ 2.19
SMDT1-201ENST00000331479 DRC1Q96MC2 740 aa28.73■■■□□ 2.19
SMDT1-201ENST00000331479 GCOM2Q9BZD3 368 aaPredicted RBP28.73■■■□□ 2.19
SMDT1-201ENST00000331479 SQORQ9Y6N5 450 aa28.73■■■□□ 2.19
SMDT1-201ENST00000331479 FAM228AQ86W67 206 aa28.72■■■□□ 2.19
SMDT1-201ENST00000331479 FMR1NBQ8N0W7 255 aaPredicted RBP28.72■■■□□ 2.19
SMDT1-201ENST00000331479 DBF4BQ8NFT6 615 aa28.72■■■□□ 2.19
SMDT1-201ENST00000331479 DNAJC19Q96DA6 116 aa28.72■■■□□ 2.19
SMDT1-201ENST00000331479 IFIH1Q9BYX4 1025 aaKnown RBP28.72■■■□□ 2.19
SMDT1-201ENST00000331479 MINDY3Q9H8M7 445 aa28.72■■■□□ 2.19
SMDT1-201ENST00000331479 ODF2LQ9ULJ1 636 aa28.72■■■□□ 2.19
SMDT1-201ENST00000331479 ZNF202O95125 648 aa28.71■■■□□ 2.19
SMDT1-201ENST00000331479 FGFR4P22455 802 aa28.71■■■□□ 2.19
SMDT1-201ENST00000331479 SNW1Q13573 536 aaKnown RBP28.71■■■□□ 2.19
SMDT1-201ENST00000331479 TFDP1Q14186 410 aa28.71■■■□□ 2.19
SMDT1-201ENST00000331479 ZNF365Q70YC5 407 aa28.71■■■□□ 2.19
SMDT1-201ENST00000331479 GRAMD1CQ8IYS0 662 aa28.71■■■□□ 2.19
SMDT1-201ENST00000331479 CEP57L1Q8IYX8 460 aa28.71■■■□□ 2.19
SMDT1-201ENST00000331479 USP38Q8NB14 1042 aa28.71■■■□□ 2.19
SMDT1-201ENST00000331479 ENGASEQ8NFI3 743 aa28.71■■■□□ 2.19
SMDT1-201ENST00000331479 GBP4Q96PP9 640 aa28.71■■■□□ 2.19
SMDT1-201ENST00000331479 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.71■■■□□ 2.19
SMDT1-201ENST00000331479 KIFC3Q9BVG8 833 aa28.71■■■□□ 2.19
SMDT1-201ENST00000331479 PADI3Q9ULW8 664 aa28.71■■■□□ 2.19
SMDT1-201ENST00000331479 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.71■■■□□ 2.19
SMDT1-201ENST00000331479 LRRIQ4A6NIV6 560 aa28.71■■■□□ 2.19
SMDT1-201ENST00000331479 RPS6KA5O75582 802 aa28.71■■■□□ 2.19
SMDT1-201ENST00000331479 LIG1P18858 919 aa28.71■■■□□ 2.19
SMDT1-201ENST00000331479 AFMP43652 599 aa28.71■■■□□ 2.19
SMDT1-201ENST00000331479 PEX3P56589 373 aa28.71■■■□□ 2.19
SMDT1-201ENST00000331479 PTENP60484 403 aa28.71■■■□□ 2.19
SMDT1-201ENST00000331479 TMEM240Q5SV17 173 aa28.71■■■□□ 2.19
SMDT1-201ENST00000331479 MAGEF1Q9HAY2 307 aa28.71■■■□□ 2.19
SMDT1-201ENST00000331479 PFKMP08237 780 aa28.7■■■□□ 2.18
SMDT1-201ENST00000331479 CASP1P29466 404 aa28.7■■■□□ 2.18
SMDT1-201ENST00000331479 NAMPTP43490 491 aa28.7■■■□□ 2.18
SMDT1-201ENST00000331479 POU5F1BQ06416 359 aa28.7■■■□□ 2.18
SMDT1-201ENST00000331479 PAGE5Q96GU1 130 aa28.7■■■□□ 2.18
SMDT1-201ENST00000331479 IFT74Q96LB3 600 aa28.7■■■□□ 2.18
SMDT1-201ENST00000331479 TRIM9Q9C026 710 aa28.7■■■□□ 2.18
SMDT1-201ENST00000331479 UBE2OQ9C0C9 1292 aaKnown RBP28.7■■■□□ 2.18
SMDT1-201ENST00000331479 USP25Q9UHP3 1055 aa28.7■■■□□ 2.18
SMDT1-201ENST00000331479 ST3GAL5Q9UNP4 418 aa28.7■■■□□ 2.18
SMDT1-201ENST00000331479 ADGRA3Q8IWK6 1321 aa28.7■■■□□ 2.18
SMDT1-201ENST00000331479 MYH11P35749 1972 aa28.69■■■□□ 2.18
SMDT1-201ENST00000331479 PLS3P13797 630 aa28.69■■■□□ 2.18
SMDT1-201ENST00000331479 PHKA2P46019 1235 aa28.69■■■□□ 2.18
SMDT1-201ENST00000331479 NPTX2P47972 431 aa28.69■■■□□ 2.18
SMDT1-201ENST00000331479 ZNF131P52739 623 aa28.69■■■□□ 2.18
SMDT1-201ENST00000331479 UBE2HP62256 183 aa28.69■■■□□ 2.18
SMDT1-201ENST00000331479 NFX1Q12986 1120 aaKnown RBP28.69■■■□□ 2.18
SMDT1-201ENST00000331479 PAK2Q13177 524 aa28.69■■■□□ 2.18
SMDT1-201ENST00000331479 ERVK-5Q9HDB9 667 aa28.69■■■□□ 2.18
SMDT1-201ENST00000331479 NR1I2O75469 434 aa28.68■■■□□ 2.18
SMDT1-201ENST00000331479 FAM13AO94988 1023 aa28.68■■■□□ 2.18
SMDT1-201ENST00000331479 FAM160A1Q05DH4 1040 aa28.68■■■□□ 2.18
SMDT1-201ENST00000331479 PPP2R5AQ15172 486 aa28.68■■■□□ 2.18
SMDT1-201ENST00000331479 C9orf50Q5SZB4 431 aa28.68■■■□□ 2.18
SMDT1-201ENST00000331479 CDCA2Q69YH5 1023 aaPredicted RBP28.68■■■□□ 2.18
SMDT1-201ENST00000331479 CNKSR3Q6P9H4 555 aa28.68■■■□□ 2.18
SMDT1-201ENST00000331479 KRBA2Q6ZNG9 492 aa28.68■■■□□ 2.18
SMDT1-201ENST00000331479 OTOP2Q7RTS6 562 aa28.68■■■□□ 2.18
SMDT1-201ENST00000331479 SRGAP1Q7Z6B7 1085 aa28.68■■■□□ 2.18
SMDT1-201ENST00000331479 IFNLR1Q8IU57 520 aaPredicted RBP28.68■■■□□ 2.18
SMDT1-201ENST00000331479 SEPT8Q92599 483 aa28.68■■■□□ 2.18
SMDT1-201ENST00000331479 NFKBIZQ9BYH8 718 aa28.68■■■□□ 2.18
SMDT1-201ENST00000331479 BLZF1Q9H2G9 400 aa28.68■■■□□ 2.18
SMDT1-201ENST00000331479 ZHX3Q9H4I2 956 aa28.68■■■□□ 2.18
SMDT1-201ENST00000331479 C17orf75Q9HAS0 396 aa28.68■■■□□ 2.18
SMDT1-201ENST00000331479 LAMA2P24043 3122 aaKnown RBP28.68■■■□□ 2.18
SMDT1-201ENST00000331479 CCDC169A6NNP5 214 aa28.67■■■□□ 2.18
SMDT1-201ENST00000331479 FGBP02675 491 aa28.67■■■□□ 2.18
SMDT1-201ENST00000331479 AMPD3Q01432 767 aa28.67■■■□□ 2.18
SMDT1-201ENST00000331479 DMP1Q13316 513 aaPredicted RBP28.67■■■□□ 2.18
SMDT1-201ENST00000331479 PSRC1Q6PGN9 363 aaPredicted RBP28.67■■■□□ 2.18
SMDT1-201ENST00000331479 CHRDL2Q6WN34 429 aa28.67■■■□□ 2.18
SMDT1-201ENST00000331479 CNNM3Q8NE01 707 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms