RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 HS6ST3Q8IZP7 471 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 USP33Q8TEY7 942 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 FBXO41Q8TF61 875 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 FOXP1Q9H334 677 aaPredicted RBP11.26□□□□□ -0.61
CLN8-201ENST00000331222 ADGRA2Q96PE1 1338 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 ARHGEF12Q9NZN5 1544 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 NPHP3-ACAD11A0A0J9YXS1 232 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 ARHGAP10A1A4S6 786 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 FAM47DPA6NHR8 397 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 PAPOLAP51003 745 aaKnown RBP11.26□□□□□ -0.61
CLN8-201ENST00000331222 PRAMEP78395 509 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 SPP2Q13103 211 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 HLFQ16534 295 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 SUSD4Q5VX71 490 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 ZC3H18Q86VM9 953 aaKnown RBP11.26□□□□□ -0.61
CLN8-201ENST00000331222 NAF1Q96HR8 494 aaKnown RBP11.26□□□□□ -0.61
CLN8-201ENST00000331222 KLC2Q9H0B6 622 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 GABBR1Q9UBS5 961 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 ABCC12Q96J65 1359 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 IQANK1A0A1B0GTG1 560 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 SPDYE5A6NIY4 337 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 COPS2P61201 443 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 SPDYE7PQ495Y7 208 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 BEST2Q8NFU1 509 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 TTC8Q8TAM2 541 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 DHX35Q9H5Z1 703 aaKnown RBP11.26□□□□□ -0.61
CLN8-201ENST00000331222 ELP3Q9H9T3 547 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 CACNA2D2Q9NY47 1150 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 AIPL1Q9NZN9 384 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 DISP1Q96F81 1524 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 F8W8V4 182 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 FGGP02679 453 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 MMP1P03956 469 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 IFNA8P32881 189 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 TRIML2Q8N7C3 387 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 TMEM106CQ9BVX2 250 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 UPF3AQ9H1J1 476 aaKnown RBP11.26□□□□□ -0.61
CLN8-201ENST00000331222 ADAM22Q9P0K1 906 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 TMCC1O94876 653 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 VCAM1P19320 739 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 FASTKD1Q53R41 847 aaKnown RBP11.26□□□□□ -0.61
CLN8-201ENST00000331222 MFSD14CQ5VZR4 134 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 SLC17A8Q8NDX2 589 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 MAST1Q9Y2H9 1570 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 COPEO14579 308 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 NDUFB5O43674 189 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 TADA2AO75478 443 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 FKBP3Q00688 224 aaKnown RBP11.26□□□□□ -0.61
CLN8-201ENST00000331222 NNTQ13423 1086 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 TRIM15Q9C019 465 aa11.26□□□□□ -0.61
CLN8-201ENST00000331222 ARHGEF37A1IGU5 675 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 GOLGA8RI6L899 631 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 TADA3O75528 432 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 ZNF445P59923 1031 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 ZBTB17Q13105 803 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 NUGGCQ68CJ6 796 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 C16orf87Q6PH81 154 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 RRM2BQ7LG56 351 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 PAGE5Q96GU1 130 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 ADAMTS1Q9UHI8 967 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 EPB42P16452 691 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 PWP1Q13610 501 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 NUP160Q12769 1436 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 PDGFRBP09619 1106 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 RFX3P48380 749 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 GPSM2P81274 684 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 NBPF20Q3BBV1 942 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 TBC1D9BQ66K14 1250 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 NBPF10Q6P3W6 841 aaKnown RBP11.25□□□□□ -0.61
CLN8-201ENST00000331222 TTC23LQ6PF05 361 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 TRIM42Q8IWZ5 723 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 NUP93Q8N1F7 819 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 IQCDQ96DY2 449 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 MUC3BQ9H195 1237 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 ATP6V0A4Q9HBG4 840 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.25□□□□□ -0.61
CLN8-201ENST00000331222 POTEFA5A3E0 1075 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 USP17L10C9JJH3 530 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 PRRG1O14668 218 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 RASGRF2O14827 1237 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 KRT14P02533 472 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 POTEIP0CG38 1075 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 GPS1Q13098 491 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 POTEGQ6S5H5 508 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 POTEEQ6S8J3 1075 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 PPM1NQ8N819 430 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 SERPINI1Q99574 410 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 SEPT5Q99719 369 aaPredicted RBP11.25□□□□□ -0.61
CLN8-201ENST00000331222 HAUS4Q9H6D7 363 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 TJP2Q9UDY2 1190 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 ATP10DQ9P241 1426 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 SGO1Q5FBB7 561 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 NLRP10Q86W26 655 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 DHTKD1Q96HY7 919 aaPredicted RBP11.25□□□□□ -0.61
CLN8-201ENST00000331222 NUP85Q9BW27 656 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 ARHGAP26Q9UNA1 814 aa11.25□□□□□ -0.61
CLN8-201ENST00000331222 MEFVO15553 781 aaPredicted RBP11.24□□□□□ -0.61
CLN8-201ENST00000331222 GNA15P30679 374 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 PHKA2P46019 1235 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 SEPT2Q15019 361 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms