RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 LXNQ9BS40 222 aa19.86■□□□□ 0.77
HDDC3-201ENST00000330334 FGF18O76093 207 aa19.85■□□□□ 0.77
HDDC3-201ENST00000330334 SLITRK3O94933 977 aa19.85■□□□□ 0.77
HDDC3-201ENST00000330334 LYPLA2O95372 231 aa19.85■□□□□ 0.77
HDDC3-201ENST00000330334 SKIP12755 728 aa19.85■□□□□ 0.77
HDDC3-201ENST00000330334 NPEPPSP55786 919 aa19.85■□□□□ 0.77
HDDC3-201ENST00000330334 PLCB3Q01970 1234 aa19.85■□□□□ 0.77
HDDC3-201ENST00000330334 ST3GAL1Q11201 340 aa19.85■□□□□ 0.77
HDDC3-201ENST00000330334 LRRC55Q6ZSA7 311 aa19.85■□□□□ 0.77
HDDC3-201ENST00000330334 ABI1Q8IZP0 508 aa19.85■□□□□ 0.77
HDDC3-201ENST00000330334 LRRC43Q8N309 656 aa19.85■□□□□ 0.77
HDDC3-201ENST00000330334 IFT122Q9HBG6 1241 aa19.85■□□□□ 0.77
HDDC3-201ENST00000330334 RGL1Q9NZL6 768 aa19.85■□□□□ 0.77
HDDC3-201ENST00000330334 PRKAG3Q9UGI9 489 aa19.85■□□□□ 0.77
HDDC3-201ENST00000330334 FNDC1Q4ZHG4 1894 aaPredicted RBP19.85■□□□□ 0.77
HDDC3-201ENST00000330334 FSD2A1L4K1 749 aa19.84■□□□□ 0.77
HDDC3-201ENST00000330334 ASAP2O43150 1006 aa19.84■□□□□ 0.77
HDDC3-201ENST00000330334 ZNF623O75123 536 aa19.84■□□□□ 0.77
HDDC3-201ENST00000330334 CSDE1O75534 798 aaKnown RBP19.84■□□□□ 0.77
HDDC3-201ENST00000330334 IL9P15248 144 aa19.84■□□□□ 0.77
HDDC3-201ENST00000330334 FGFR4P22455 802 aa19.84■□□□□ 0.77
HDDC3-201ENST00000330334 IRS1P35568 1242 aa19.84■□□□□ 0.77
HDDC3-201ENST00000330334 PHKA2P46019 1235 aa19.84■□□□□ 0.77
HDDC3-201ENST00000330334 POLGP54098 1239 aaPredicted RBP19.84■□□□□ 0.77
HDDC3-201ENST00000330334 CALCRLQ16602 461 aa19.84■□□□□ 0.77
HDDC3-201ENST00000330334 NCAPH2Q6IBW4 605 aa19.84■□□□□ 0.77
HDDC3-201ENST00000330334 GJD3Q8N144 294 aa19.84■□□□□ 0.77
HDDC3-201ENST00000330334 EFHBQ8N7U6 833 aa19.84■□□□□ 0.77
HDDC3-201ENST00000330334 ZNF579Q8NAF0 562 aaKnown RBP19.84■□□□□ 0.77
HDDC3-201ENST00000330334 PRPF31Q8WWY3 499 aaKnown RBP19.84■□□□□ 0.77
HDDC3-201ENST00000330334 PSPC1Q8WXF1 523 aaKnown RBP19.84■□□□□ 0.77
HDDC3-201ENST00000330334 DYDC2Q96IM9 177 aa19.84■□□□□ 0.77
HDDC3-201ENST00000330334 MTMR9Q96QG7 549 aa19.84■□□□□ 0.77
HDDC3-201ENST00000330334 TLR9Q9NR96 1032 aa19.84■□□□□ 0.77
HDDC3-201ENST00000330334 COL4A3BPQ9Y5P4 624 aa19.84■□□□□ 0.77
HDDC3-201ENST00000330334 NEMFO60524 1076 aa19.83■□□□□ 0.77
HDDC3-201ENST00000330334 ATF7P17544 494 aaPredicted RBP19.83■□□□□ 0.77
HDDC3-201ENST00000330334 PPM1AP35813 382 aa19.83■□□□□ 0.77
HDDC3-201ENST00000330334 SAFBQ15424 915 aaKnown RBP eCLIP19.83■□□□□ 0.77
HDDC3-201ENST00000330334 CLLU1OSQ5K130 101 aa19.83■□□□□ 0.77
HDDC3-201ENST00000330334 EP400NLQ6ZTU2 488 aa19.83■□□□□ 0.77
HDDC3-201ENST00000330334 SRGAP1Q7Z6B7 1085 aa19.83■□□□□ 0.77
HDDC3-201ENST00000330334 KSR1Q8IVT5 923 aa19.83■□□□□ 0.77
HDDC3-201ENST00000330334 THNSL1Q8IYQ7 743 aa19.83■□□□□ 0.77
HDDC3-201ENST00000330334 TCP11Q8WWU5 503 aa19.83■□□□□ 0.77
HDDC3-201ENST00000330334 ZSCAN31Q96LW9 406 aaPredicted RBP19.83■□□□□ 0.77
HDDC3-201ENST00000330334 EIF2AK1Q9BQI3 630 aaKnown RBP19.83■□□□□ 0.77
HDDC3-201ENST00000330334 MRPL9Q9BYD2 267 aaKnown RBP19.83■□□□□ 0.77
HDDC3-201ENST00000330334 IGFLR1Q9H665 355 aa19.83■□□□□ 0.77
HDDC3-201ENST00000330334 TTC12Q9H892 705 aaPredicted RBP19.83■□□□□ 0.77
HDDC3-201ENST00000330334 CD320Q9NPF0 282 aa19.83■□□□□ 0.77
HDDC3-201ENST00000330334 PUF60Q9UHX1 559 aaKnown RBP19.83■□□□□ 0.77
HDDC3-201ENST00000330334 CARNS1A5YM72 827 aa19.82■□□□□ 0.76
HDDC3-201ENST00000330334 FSCN2O14926 492 aa19.82■□□□□ 0.76
HDDC3-201ENST00000330334 GTF2F1P35269 517 aaKnown RBP eCLIP19.82■□□□□ 0.76
HDDC3-201ENST00000330334 DLX2Q07687 328 aaPredicted RBP19.82■□□□□ 0.76
HDDC3-201ENST00000330334 PCBP1Q15365 356 aaKnown RBP eCLIP19.82■□□□□ 0.76
HDDC3-201ENST00000330334 SMAD2Q15796 467 aaKnown RBP19.82■□□□□ 0.76
HDDC3-201ENST00000330334 KCNT2Q6UVM3 1135 aa19.82■□□□□ 0.76
HDDC3-201ENST00000330334 TPH2Q8IWU9 490 aa19.82■□□□□ 0.76
HDDC3-201ENST00000330334 MRPS27Q92552 414 aaKnown RBP19.82■□□□□ 0.76
HDDC3-201ENST00000330334 MSLNLQ96KJ4 702 aa19.82■□□□□ 0.76
HDDC3-201ENST00000330334 NLRP4Q96MN2 994 aa19.82■□□□□ 0.76
HDDC3-201ENST00000330334 CDCA3Q99618 268 aaPredicted RBP19.82■□□□□ 0.76
HDDC3-201ENST00000330334 ANKEF1Q9NU02 776 aa19.82■□□□□ 0.76
HDDC3-201ENST00000330334 HCSTQ9UBK5 93 aa19.82■□□□□ 0.76
HDDC3-201ENST00000330334 KIAA1671Q9BY89 1806 aa19.81■□□□□ 0.76
HDDC3-201ENST00000330334 PI4K2BG5E9Z4 385 aa19.81■□□□□ 0.76
HDDC3-201ENST00000330334 TBX10O75333 385 aa19.81■□□□□ 0.76
HDDC3-201ENST00000330334 EYA4O95677 639 aa19.81■□□□□ 0.76
HDDC3-201ENST00000330334 XRCC6P12956 609 aaKnown RBP eCLIP19.81■□□□□ 0.76
HDDC3-201ENST00000330334 RAB27AP51159 221 aa19.81■□□□□ 0.76
HDDC3-201ENST00000330334 HMGN5P82970 282 aaKnown RBP19.81■□□□□ 0.76
HDDC3-201ENST00000330334 CYP4A11Q02928 519 aa19.81■□□□□ 0.76
HDDC3-201ENST00000330334 KRT17Q04695 432 aa19.81■□□□□ 0.76
HDDC3-201ENST00000330334 POU5F1BQ06416 359 aa19.81■□□□□ 0.76
HDDC3-201ENST00000330334 LAMTOR4Q0VGL1 99 aa19.81■□□□□ 0.76
HDDC3-201ENST00000330334 ORC2Q13416 577 aaPredicted RBP19.81■□□□□ 0.76
HDDC3-201ENST00000330334 SMAD4Q13485 552 aaKnown RBP19.81■□□□□ 0.76
HDDC3-201ENST00000330334 CTTNQ14247 550 aaKnown RBP19.81■□□□□ 0.76
HDDC3-201ENST00000330334 XKR9Q5GH70 373 aa19.81■□□□□ 0.76
HDDC3-201ENST00000330334 TWF2Q6IBS0 349 aaKnown RBP19.81■□□□□ 0.76
HDDC3-201ENST00000330334 CATSPER4Q7RTX7 472 aa19.81■□□□□ 0.76
HDDC3-201ENST00000330334 ADGRD2Q7Z7M1 963 aa19.81■□□□□ 0.76
HDDC3-201ENST00000330334 MICAL1Q8TDZ2 1067 aa19.81■□□□□ 0.76
HDDC3-201ENST00000330334 TMEM143Q96AN5 459 aa19.81■□□□□ 0.76
HDDC3-201ENST00000330334 ZNF558Q96NG5 402 aa19.81■□□□□ 0.76
HDDC3-201ENST00000330334 KIF2CQ99661 725 aa19.81■□□□□ 0.76
HDDC3-201ENST00000330334 FOXP1Q9H334 677 aaPredicted RBP19.81■□□□□ 0.76
HDDC3-201ENST00000330334 TLE6Q9H808 572 aa19.81■□□□□ 0.76
HDDC3-201ENST00000330334 SH2B1Q9NRF2 756 aaPredicted RBP19.81■□□□□ 0.76
HDDC3-201ENST00000330334 AGPAT5Q9NUQ2 364 aa19.81■□□□□ 0.76
HDDC3-201ENST00000330334 SPG21Q9NZD8 308 aa19.81■□□□□ 0.76
HDDC3-201ENST00000330334 PIN4Q9Y237 131 aaKnown RBP19.81■□□□□ 0.76
HDDC3-201ENST00000330334 C19orf67A6NJJ6 358 aa19.8■□□□□ 0.76
HDDC3-201ENST00000330334 WNT7AO00755 349 aa19.8■□□□□ 0.76
HDDC3-201ENST00000330334 ZBTB39O15060 712 aa19.8■□□□□ 0.76
HDDC3-201ENST00000330334 LINC01565O15544 149 aa19.8■□□□□ 0.76
HDDC3-201ENST00000330334 MBTPS2O43462 519 aa19.8■□□□□ 0.76
HDDC3-201ENST00000330334 TXKP42681 527 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms