RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 POLR3CQ9BUI4 534 aaPredicted RBP18.21■□□□□ 0.51
PDLIM1-201ENST00000329399 BMP2KQ9NSY1 1161 aaPredicted RBP18.21■□□□□ 0.51
PDLIM1-201ENST00000329399 CDY2AQ9Y6F7 541 aa18.21■□□□□ 0.51
PDLIM1-201ENST00000329399 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 GOLGA6L6A8MZA4 724 aa18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 RPN1P04843 607 aaKnown RBP18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 PFKMP08237 780 aa18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 PRR29P0C7W0 189 aa18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 RPA1P27694 616 aa18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 DEFB103AP81534 67 aa18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 SMAD3P84022 425 aaKnown RBP18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 GRB10Q13322 594 aa18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 MKRN4PQ13434 485 aaPredicted RBP18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 TARBP2Q15633 366 aaKnown RBP18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 PLEKHG4Q58EX7 1191 aa18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 NCAPH2Q6IBW4 605 aa18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 ANO5Q75V66 913 aa18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 RDM1Q8NG50 284 aa18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 NEK9Q8TD19 979 aa18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 LARP4BQ92615 738 aaKnown RBP18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 FAM161BQ96MY7 647 aa18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 PBX4Q9BYU1 374 aa18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 TTYH1Q9H313 450 aaPredicted RBP18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 AGO3Q9H9G7 860 aaKnown RBP18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 PP2D1A8MPX8 630 aa18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 RHOBTB3O94955 611 aa18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 ADCY5O95622 1261 aa18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 GHRP10912 638 aa18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 CDC25BP30305 580 aa18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 CCT6AP40227 531 aaKnown RBP18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 DRP2Q13474 957 aa18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 STIM1Q13586 685 aa18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 CTTNQ14247 550 aaKnown RBP18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 DHX8Q14562 1220 aaKnown RBP18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 LPIN1Q14693 890 aa18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 COBLL1Q53SF7 1204 aa18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 LRRC71Q8N4P6 559 aa18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 AOPEPQ8N6M6 819 aa18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 LINC01465Q8N7H1 131 aa18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 RAD54LQ92698 747 aa18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 DYDC2Q96IM9 177 aa18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 PPP1R16BQ96T49 567 aa18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 TUFT1Q9NNX1 390 aa18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 YBX2Q9Y2T7 364 aaKnown RBP18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 SLC4A7Q9Y6M7 1214 aa18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 TRANK1O15050 2925 aa18.2■□□□□ 0.5
PDLIM1-201ENST00000329399 REV3LO60673 3130 aa18.19■□□□□ 0.5
PDLIM1-201ENST00000329399 SMIM35A0A1B0GVV1 85 aa18.19■□□□□ 0.5
PDLIM1-201ENST00000329399 POTEMA6NI47 508 aa18.19■□□□□ 0.5
PDLIM1-201ENST00000329399 CAND2O75155 1236 aa18.19■□□□□ 0.5
PDLIM1-201ENST00000329399 SLITRK3O94933 977 aa18.19■□□□□ 0.5
PDLIM1-201ENST00000329399 CLCN3P51790 818 aa18.19■□□□□ 0.5
PDLIM1-201ENST00000329399 NPEPPSP55786 919 aa18.19■□□□□ 0.5
PDLIM1-201ENST00000329399 WDR5P61964 334 aaKnown RBP18.19■□□□□ 0.5
PDLIM1-201ENST00000329399 MRPS6P82932 125 aaKnown RBP18.19■□□□□ 0.5
PDLIM1-201ENST00000329399 CYP4A11Q02928 519 aa18.19■□□□□ 0.5
PDLIM1-201ENST00000329399 PSMD2Q13200 908 aa18.19■□□□□ 0.5
PDLIM1-201ENST00000329399 EPHA7Q15375 998 aa18.19■□□□□ 0.5
PDLIM1-201ENST00000329399 PLA2G4FQ68DD2 849 aa18.19■□□□□ 0.5
PDLIM1-201ENST00000329399 CNKSR3Q6P9H4 555 aa18.19■□□□□ 0.5
PDLIM1-201ENST00000329399 GRAMD1CQ8IYS0 662 aa18.19■□□□□ 0.5
PDLIM1-201ENST00000329399 DEFB123Q8N688 67 aa18.19■□□□□ 0.5
PDLIM1-201ENST00000329399 MRFAP1L1Q96HT8 127 aa18.19■□□□□ 0.5
PDLIM1-201ENST00000329399 ZNF668Q96K58 619 aaPredicted RBP18.19■□□□□ 0.5
PDLIM1-201ENST00000329399 PNMA5Q96PV4 448 aa18.19■□□□□ 0.5
PDLIM1-201ENST00000329399 MTRQ99707 1265 aa18.19■□□□□ 0.5
PDLIM1-201ENST00000329399 TRIM9Q9C026 710 aa18.19■□□□□ 0.5
PDLIM1-201ENST00000329399 NRBP2Q9NSY0 501 aa18.19■□□□□ 0.5
PDLIM1-201ENST00000329399 SPTBN5Q9NRC6 3674 aaKnown RBP18.18■□□□□ 0.5
PDLIM1-201ENST00000329399 COL1A2P08123 1366 aa18.18■□□□□ 0.5
PDLIM1-201ENST00000329399 ARHGEF15O94989 841 aa18.18■□□□□ 0.5
PDLIM1-201ENST00000329399 VTNP04004 478 aa18.18■□□□□ 0.5
PDLIM1-201ENST00000329399 ATP2A2P16615 1042 aaKnown RBP18.18■□□□□ 0.5
PDLIM1-201ENST00000329399 DNAJB2P25686 324 aa18.18■□□□□ 0.5
PDLIM1-201ENST00000329399 PSMC5P62195 406 aa18.18■□□□□ 0.5
PDLIM1-201ENST00000329399 CUL4BQ13620 913 aa18.18■□□□□ 0.5
PDLIM1-201ENST00000329399 FBXO47Q5MNV8 452 aa18.18■□□□□ 0.5
PDLIM1-201ENST00000329399 METTL13Q8N6R0 699 aa18.18■□□□□ 0.5
PDLIM1-201ENST00000329399 TMEM40Q8WWA1 233 aa18.18■□□□□ 0.5
PDLIM1-201ENST00000329399 HSD17B14Q9BPX1 270 aa18.18■□□□□ 0.5
PDLIM1-201ENST00000329399 EIF2AK1Q9BQI3 630 aaKnown RBP18.18■□□□□ 0.5
PDLIM1-201ENST00000329399 NIFKQ9BYG3 293 aaKnown RBP18.18■□□□□ 0.5
PDLIM1-201ENST00000329399 SIP14410 1827 aa18.18■□□□□ 0.5
PDLIM1-201ENST00000329399 PARNO95453 639 aaKnown RBP18.17■□□□□ 0.5
PDLIM1-201ENST00000329399 P4HBP07237 508 aaKnown RBP18.17■□□□□ 0.5
PDLIM1-201ENST00000329399 BMP6P22004 513 aa18.17■□□□□ 0.5
PDLIM1-201ENST00000329399 QARSP47897 775 aaKnown RBP18.17■□□□□ 0.5
PDLIM1-201ENST00000329399 MTERF2Q49AM1 385 aa18.17■□□□□ 0.5
PDLIM1-201ENST00000329399 XKR3Q5GH77 459 aa18.17■□□□□ 0.5
PDLIM1-201ENST00000329399 EFCAB12Q6NXP0 572 aa18.17■□□□□ 0.5
PDLIM1-201ENST00000329399 FAM167AQ96KS9 214 aa18.17■□□□□ 0.5
PDLIM1-201ENST00000329399 LXNQ9BS40 222 aa18.17■□□□□ 0.5
PDLIM1-201ENST00000329399 TRIM5Q9C035 493 aa18.17■□□□□ 0.5
PDLIM1-201ENST00000329399 SEMA6BQ9H3T3 888 aa18.17■□□□□ 0.5
PDLIM1-201ENST00000329399 BLOC1S4Q9NUP1 217 aa18.17■□□□□ 0.5
PDLIM1-201ENST00000329399 SEPT9Q9UHD8 586 aaPredicted RBP18.17■□□□□ 0.5
PDLIM1-201ENST00000329399 DNM3Q9UQ16 869 aa18.17■□□□□ 0.5
PDLIM1-201ENST00000329399 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms