RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 PARVGQ9HBI0 331 aa20.67■□□□□ 0.9
EXOSC3-201ENST00000327304 SPTLC3Q9NUV7 552 aa20.67■□□□□ 0.9
EXOSC3-201ENST00000327304 COL1A2P08123 1366 aa20.67■□□□□ 0.9
EXOSC3-201ENST00000327304 SCN10AQ9Y5Y9 1956 aa20.67■□□□□ 0.9
EXOSC3-201ENST00000327304 GAP43P17677 238 aa20.67■□□□□ 0.9
EXOSC3-201ENST00000327304 PMS1P54277 932 aaKnown RBP20.67■□□□□ 0.9
EXOSC3-201ENST00000327304 NOLC1Q14978 699 aaKnown RBP eCLIP20.67■□□□□ 0.9
EXOSC3-201ENST00000327304 FAM26FQ5R3K3 315 aa20.67■□□□□ 0.9
EXOSC3-201ENST00000327304 SPECC1LQ69YQ0 1117 aa20.67■□□□□ 0.9
EXOSC3-201ENST00000327304 CENPPQ6IPU0 288 aa20.67■□□□□ 0.9
EXOSC3-201ENST00000327304 MYCT1Q8N699 235 aa20.67■□□□□ 0.9
EXOSC3-201ENST00000327304 PCSK9Q8NBP7 692 aaKnown RBP20.67■□□□□ 0.9
EXOSC3-201ENST00000327304 GLIS3Q8NEA6 775 aa20.67■□□□□ 0.9
EXOSC3-201ENST00000327304 ZNF333Q96JL9 665 aa20.67■□□□□ 0.9
EXOSC3-201ENST00000327304 DRC1Q96MC2 740 aa20.67■□□□□ 0.9
EXOSC3-201ENST00000327304 SLC39A2Q9NP94 309 aa20.67■□□□□ 0.9
EXOSC3-201ENST00000327304 SETD4Q9NVD3 440 aa20.67■□□□□ 0.9
EXOSC3-201ENST00000327304 PCDHA2Q9Y5H9 948 aa20.67■□□□□ 0.9
EXOSC3-201ENST00000327304 MYH11P35749 1972 aa20.66■□□□□ 0.9
EXOSC3-201ENST00000327304 IGKV6-21A0A0C4DH24 114 aa20.66■□□□□ 0.9
EXOSC3-201ENST00000327304 TRIM49BA6NDI0 452 aa20.66■□□□□ 0.9
EXOSC3-201ENST00000327304 KCNJ18B7U540 433 aa20.66■□□□□ 0.9
EXOSC3-201ENST00000327304 SFPQP23246 707 aaKnown RBP eCLIP20.66■□□□□ 0.9
EXOSC3-201ENST00000327304 EEF1GP26641 437 aaKnown RBP20.66■□□□□ 0.9
EXOSC3-201ENST00000327304 DRP2Q13474 957 aa20.66■□□□□ 0.9
EXOSC3-201ENST00000327304 KCNJ12Q14500 433 aa20.66■□□□□ 0.9
EXOSC3-201ENST00000327304 ARID5BQ14865 1188 aa20.66■□□□□ 0.9
EXOSC3-201ENST00000327304 LRRC71Q8N4P6 559 aa20.66■□□□□ 0.9
EXOSC3-201ENST00000327304 LMBR1Q8WVP7 490 aa20.66■□□□□ 0.9
EXOSC3-201ENST00000327304 POLR3FQ9H1D9 316 aaPredicted RBP20.66■□□□□ 0.9
EXOSC3-201ENST00000327304 CCZ1BP86790 482 aa20.65■□□□□ 0.9
EXOSC3-201ENST00000327304 CCZ1P86791 482 aaPredicted RBP20.65■□□□□ 0.9
EXOSC3-201ENST00000327304 TBX2Q13207 712 aaPredicted RBP20.65■□□□□ 0.9
EXOSC3-201ENST00000327304 MKRN4PQ13434 485 aaPredicted RBP20.65■□□□□ 0.9
EXOSC3-201ENST00000327304 HIC1Q14526 733 aa20.65■□□□□ 0.9
EXOSC3-201ENST00000327304 KRT31Q15323 416 aa20.65■□□□□ 0.9
EXOSC3-201ENST00000327304 MARCH8Q5T0T0 291 aa20.65■□□□□ 0.9
EXOSC3-201ENST00000327304 ARMCX5Q6P1M9 558 aa20.65■□□□□ 0.9
EXOSC3-201ENST00000327304 BSNDQ8WZ55 320 aa20.65■□□□□ 0.9
EXOSC3-201ENST00000327304 KIFAP3Q92845 792 aa20.65■□□□□ 0.9
EXOSC3-201ENST00000327304 ARMC5Q96C12 935 aa20.65■□□□□ 0.9
EXOSC3-201ENST00000327304 DUSP9Q99956 384 aaKnown RBP20.65■□□□□ 0.9
EXOSC3-201ENST00000327304 NRDCO43847 1150 aa20.64■□□□□ 0.9
EXOSC3-201ENST00000327304 KLRC1P26715 233 aa20.64■□□□□ 0.9
EXOSC3-201ENST00000327304 ACLYP53396 1101 aa20.64■□□□□ 0.9
EXOSC3-201ENST00000327304 ODR4Q5SWX8 454 aa20.64■□□□□ 0.9
EXOSC3-201ENST00000327304 IRF2BP1Q8IU81 584 aa20.64■□□□□ 0.9
EXOSC3-201ENST00000327304 FIZ1Q96SL8 496 aa20.64■□□□□ 0.9
EXOSC3-201ENST00000327304 SUGCTQ9HAC7 445 aa20.64■□□□□ 0.9
EXOSC3-201ENST00000327304 HDAC6Q9UBN7 1215 aa20.64■□□□□ 0.9
EXOSC3-201ENST00000327304 BRCA2P51587 3418 aa20.64■□□□□ 0.9
EXOSC3-201ENST00000327304 SKILP12757 684 aa20.64■□□□□ 0.89
EXOSC3-201ENST00000327304 PLS3P13797 630 aa20.64■□□□□ 0.89
EXOSC3-201ENST00000327304 ARL2P36404 184 aa20.64■□□□□ 0.89
EXOSC3-201ENST00000327304 PBX1P40424 430 aa20.64■□□□□ 0.89
EXOSC3-201ENST00000327304 CLCN3P51790 818 aa20.64■□□□□ 0.89
EXOSC3-201ENST00000327304 NBPF20Q3BBV1 942 aa20.64■□□□□ 0.89
EXOSC3-201ENST00000327304 ANKRD40Q6AI12 368 aa20.64■□□□□ 0.89
EXOSC3-201ENST00000327304 MTHFD1LQ6UB35 978 aa20.64■□□□□ 0.89
EXOSC3-201ENST00000327304 FAM114A1Q8IWE2 563 aa20.64■□□□□ 0.89
EXOSC3-201ENST00000327304 CSGALNACT2Q8N6G5 542 aa20.64■□□□□ 0.89
EXOSC3-201ENST00000327304 ASAP3Q8TDY4 903 aa20.64■□□□□ 0.89
EXOSC3-201ENST00000327304 SRRTQ9BXP5 876 aaKnown RBP20.64■□□□□ 0.89
EXOSC3-201ENST00000327304 KAT6AQ92794 2004 aa20.63■□□□□ 0.89
EXOSC3-201ENST00000327304 NRCAMQ92823 1304 aa20.63■□□□□ 0.89
EXOSC3-201ENST00000327304 RRN3P2A6NIE6 340 aa20.63■□□□□ 0.89
EXOSC3-201ENST00000327304 NMT1P30419 496 aaKnown RBP20.63■□□□□ 0.89
EXOSC3-201ENST00000327304 CASP5P51878 434 aa20.63■□□□□ 0.89
EXOSC3-201ENST00000327304 COPB1P53618 953 aaKnown RBP20.63■□□□□ 0.89
EXOSC3-201ENST00000327304 LRRC63Q05C16 580 aa20.63■□□□□ 0.89
EXOSC3-201ENST00000327304 EFCAB12Q6NXP0 572 aa20.63■□□□□ 0.89
EXOSC3-201ENST00000327304 EXOC8Q8IYI6 725 aa20.63■□□□□ 0.89
EXOSC3-201ENST00000327304 METTL13Q8N6R0 699 aa20.63■□□□□ 0.89
EXOSC3-201ENST00000327304 C7orf31Q8N865 590 aa20.63■□□□□ 0.89
EXOSC3-201ENST00000327304 ARRDC4Q8NCT1 418 aa20.63■□□□□ 0.89
EXOSC3-201ENST00000327304 TSEN34Q9BSV6 310 aaKnown RBP20.63■□□□□ 0.89
EXOSC3-201ENST00000327304 SEMA6BQ9H3T3 888 aa20.63■□□□□ 0.89
EXOSC3-201ENST00000327304 MRPL44Q9H9J2 332 aaKnown RBP20.63■□□□□ 0.89
EXOSC3-201ENST00000327304 OLFML3Q9NRN5 406 aa20.63■□□□□ 0.89
EXOSC3-201ENST00000327304 MAGEC2Q9UBF1 373 aaPredicted RBP20.63■□□□□ 0.89
EXOSC3-201ENST00000327304 SEL1LQ9UBV2 794 aa20.63■□□□□ 0.89
EXOSC3-201ENST00000327304 ITIH6Q6UXX5 1313 aa20.63■□□□□ 0.89
EXOSC3-201ENST00000327304 MAGEB2O15479 319 aa20.62■□□□□ 0.89
EXOSC3-201ENST00000327304 KIF20AO95235 890 aa20.62■□□□□ 0.89
EXOSC3-201ENST00000327304 PEX3P56589 373 aa20.62■□□□□ 0.89
EXOSC3-201ENST00000327304 FAM178BQ8IXR5 827 aa20.62■□□□□ 0.89
EXOSC3-201ENST00000327304 LINC01465Q8N7H1 131 aa20.62■□□□□ 0.89
EXOSC3-201ENST00000327304 CCDC112Q8NEF3 446 aa20.62■□□□□ 0.89
EXOSC3-201ENST00000327304 JPH2Q9BR39 696 aaPredicted RBP20.62■□□□□ 0.89
EXOSC3-201ENST00000327304 LARSQ9P2J5 1176 aaKnown RBP20.62■□□□□ 0.89
EXOSC3-201ENST00000327304 GRIN2DO15399 1336 aa20.62■□□□□ 0.89
EXOSC3-201ENST00000327304 EVPLQ92817 2033 aa20.62■□□□□ 0.89
EXOSC3-201ENST00000327304 MOXD2PA6NHM9 499 aa20.62■□□□□ 0.89
EXOSC3-201ENST00000327304 N4BP3O15049 544 aa20.62■□□□□ 0.89
EXOSC3-201ENST00000327304 TEX33O43247 280 aa20.62■□□□□ 0.89
EXOSC3-201ENST00000327304 GAS2O43903 313 aaKnown RBP20.62■□□□□ 0.89
EXOSC3-201ENST00000327304 OFD1O75665 1012 aa20.62■□□□□ 0.89
EXOSC3-201ENST00000327304 FGFR1OPO95684 399 aaKnown RBP20.62■□□□□ 0.89
EXOSC3-201ENST00000327304 MYBP10242 640 aa20.62■□□□□ 0.89
EXOSC3-201ENST00000327304 GLRA2P23416 452 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms