RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 SPATA1Q5VX52 437 aa11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 EFCAB12Q6NXP0 572 aa11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 TTI2Q6NXR4 508 aa11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 FBXO46Q6PJ61 603 aaPredicted RBP11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 HVCN1Q96D96 273 aa11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 TSEN34Q9BSV6 310 aaKnown RBP11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 SEMA6BQ9H3T3 888 aa11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 KMT5AQ9NQR1 393 aa11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 SETD4Q9NVD3 440 aa11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 EVPLQ92817 2033 aa11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 MBLAC1A4D2B0 266 aaPredicted RBP11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 CCDC169A6NNP5 214 aa11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 SLC16A4O15374 487 aa11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 CABYRO75952 493 aa11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 PRPF6O94906 941 aaKnown RBP11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 ABCD1P33897 745 aa11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 PMS1P54277 932 aaKnown RBP11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 CHMP4BP1P59074 171 aa11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 TPM4P67936 248 aa11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 LRRC63Q05C16 580 aa11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 MXD4Q14582 209 aaPredicted RBP11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 PKN2Q16513 984 aaKnown RBP11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 HAUS6Q7Z4H7 955 aa11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 C7orf31Q8N865 590 aa11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 TMEM161BQ8NDZ6 487 aa11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 KCTD10Q9H3F6 313 aa11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 SUCLA2Q9P2R7 463 aaPredicted RBP11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 ZMYM2Q9UBW7 1377 aa11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 C17orf102A2RUQ5 167 aa11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 TRIM49BA6NDI0 452 aa11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 MOXD2PA6NHM9 499 aa11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 MYCNP04198 464 aaPredicted RBP11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 CCL5P13501 91 aa11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 TMOD1P28289 359 aa11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 HOXD13P35453 343 aa11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 CLCN3P51790 818 aa11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 ADAM17P78536 824 aa11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 GTF2BQ00403 316 aa11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 CAPSQ13938 189 aa11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 KNOP1Q1ED39 458 aaKnown RBP11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 ZCWPW2Q504Y3 356 aa11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 ZC2HC1CQ53FD0 456 aaPredicted RBP11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 NFRKBQ6P4R8 1299 aa11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 NELFCDQ8IXH7 590 aa11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 METTL13Q8N6R0 699 aa11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 PRPF31Q8WWY3 499 aaKnown RBP11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 ZBTB10Q96DT7 871 aa11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 TSG101Q99816 390 aa11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 ARHGAP28Q9P2N2 729 aa11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 NFE2L3Q9Y4A8 694 aa11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 ADGRA3Q8IWK6 1321 aa11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 ASAP2O43150 1006 aa11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 GNAT1P11488 350 aa11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 ACLYP53396 1101 aa11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 LAMTOR4Q0VGL1 99 aa11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 NBPF20Q3BBV1 942 aa11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 PPP4R3CPQ6ZMV5 832 aa11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 SESTD1Q86VW0 696 aa11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 ARRDC4Q8NCT1 418 aa11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 ACCSQ96QU6 501 aa11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 KIFC3Q9BVG8 833 aa11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 HDAC6Q9UBN7 1215 aa11.28□□□□□ -0.6
VIPAS39-201ENST00000327028 TFDP1Q14186 410 aa11.27□□□□□ -0.6
VIPAS39-201ENST00000327028 HIC1Q14526 733 aa11.27□□□□□ -0.6
VIPAS39-201ENST00000327028 MTFR1Q15390 333 aa11.27□□□□□ -0.6
VIPAS39-201ENST00000327028 CDCA2Q69YH5 1023 aaPredicted RBP11.27□□□□□ -0.6
VIPAS39-201ENST00000327028 ANKRD40Q6AI12 368 aa11.27□□□□□ -0.6
VIPAS39-201ENST00000327028 DEPTORQ8TB45 409 aa11.27□□□□□ -0.6
VIPAS39-201ENST00000327028 MAP7D2Q96T17 732 aa11.27□□□□□ -0.6
VIPAS39-201ENST00000327028 DUSP9Q99956 384 aaKnown RBP11.27□□□□□ -0.6
VIPAS39-201ENST00000327028 HSD3B7Q9H2F3 369 aa11.27□□□□□ -0.6
VIPAS39-201ENST00000327028 TMEM206Q9H813 350 aa11.27□□□□□ -0.6
VIPAS39-201ENST00000327028 PHLPP2Q6ZVD8 1323 aa11.27□□□□□ -0.61
VIPAS39-201ENST00000327028 SMIM35A0A1B0GVV1 85 aa11.27□□□□□ -0.61
VIPAS39-201ENST00000327028 DENND3A2RUS2 1198 aa11.27□□□□□ -0.61
VIPAS39-201ENST00000327028 LRRIQ4A6NIV6 560 aa11.27□□□□□ -0.61
VIPAS39-201ENST00000327028 PDXKO00764 312 aa11.27□□□□□ -0.61
VIPAS39-201ENST00000327028 TPD52L1Q16890 204 aaPredicted RBP11.27□□□□□ -0.61
VIPAS39-201ENST00000327028 MAP4K3Q8IVH8 894 aa11.27□□□□□ -0.61
VIPAS39-201ENST00000327028 NOC3LQ8WTT2 800 aaKnown RBP11.27□□□□□ -0.61
VIPAS39-201ENST00000327028 PPP1R13LQ8WUF5 828 aa11.27□□□□□ -0.61
VIPAS39-201ENST00000327028 ARMC5Q96C12 935 aa11.27□□□□□ -0.61
VIPAS39-201ENST00000327028 ZNF333Q96JL9 665 aa11.27□□□□□ -0.61
VIPAS39-201ENST00000327028 TYW1Q9NV66 732 aaKnown RBP11.27□□□□□ -0.61
VIPAS39-201ENST00000327028 FANCLQ9NW38 375 aa11.27□□□□□ -0.61
VIPAS39-201ENST00000327028 GTF2IRD1Q9UHL9 959 aa11.27□□□□□ -0.61
VIPAS39-201ENST00000327028 TRAF3IP3Q9Y228 551 aa11.27□□□□□ -0.61
VIPAS39-201ENST00000327028 KBTBD13C9JR72 458 aa11.26□□□□□ -0.61
VIPAS39-201ENST00000327028 CALUO43852 315 aaPredicted RBP11.26□□□□□ -0.61
VIPAS39-201ENST00000327028 ZNF18P17022 549 aa11.26□□□□□ -0.61
VIPAS39-201ENST00000327028 KCNA1Q09470 495 aa11.26□□□□□ -0.61
VIPAS39-201ENST00000327028 EDRF1Q3B7T1 1238 aa11.26□□□□□ -0.61
VIPAS39-201ENST00000327028 CDKAL1Q5VV42 579 aa11.26□□□□□ -0.61
VIPAS39-201ENST00000327028 RHPN2Q8IUC4 686 aa11.26□□□□□ -0.61
VIPAS39-201ENST00000327028 KSR1Q8IVT5 923 aa11.26□□□□□ -0.61
VIPAS39-201ENST00000327028 KIAA0319LQ8IZA0 1049 aa11.26□□□□□ -0.61
VIPAS39-201ENST00000327028 GOLGA5Q8TBA6 731 aa11.26□□□□□ -0.61
VIPAS39-201ENST00000327028 C2orf40Q9H1Z8 148 aa11.26□□□□□ -0.61
VIPAS39-201ENST00000327028 TBX20Q9UMR3 447 aa11.26□□□□□ -0.61
VIPAS39-201ENST00000327028 EXOC7Q9UPT5 735 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms