RNA–Protein interactions for RNA: ENST00000326298.8

CCNC-201, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-201ENST00000326298 BTBD18B2RXH4 712 aa9.12□□□□□ -0.95
CCNC-201ENST00000326298 PPP2R5CQ13362 524 aa9.12□□□□□ -0.95
CCNC-201ENST00000326298 CTTNQ14247 550 aaKnown RBP9.12□□□□□ -0.95
CCNC-201ENST00000326298 PLPP4Q5VZY2 271 aa9.12□□□□□ -0.95
CCNC-201ENST00000326298 KANK3Q6NY19 840 aa9.12□□□□□ -0.95
CCNC-201ENST00000326298 MOXD1Q6UVY6 613 aa9.12□□□□□ -0.95
CCNC-201ENST00000326298 NEK8Q86SG6 692 aa9.12□□□□□ -0.95
CCNC-201ENST00000326298 THNSL1Q8IYQ7 743 aa9.12□□□□□ -0.95
CCNC-201ENST00000326298 MICAL1Q8TDZ2 1067 aa9.12□□□□□ -0.95
CCNC-201ENST00000326298 DYDC2Q96IM9 177 aa9.12□□□□□ -0.95
CCNC-201ENST00000326298 NLRP4Q96MN2 994 aa9.12□□□□□ -0.95
CCNC-201ENST00000326298 C1QTNF1Q9BXJ1 281 aa9.12□□□□□ -0.95
CCNC-201ENST00000326298 SUCLA2Q9P2R7 463 aaPredicted RBP9.12□□□□□ -0.95
CCNC-201ENST00000326298 STK36Q9NRP7 1315 aa9.12□□□□□ -0.95
CCNC-201ENST00000326298 A0A0U1RQF3 1178 aa9.12□□□□□ -0.95
CCNC-201ENST00000326298 CCDC194A0A1B0GVG4 234 aa9.12□□□□□ -0.95
CCNC-201ENST00000326298 FSCN2O14926 492 aa9.12□□□□□ -0.95
CCNC-201ENST00000326298 TMOD1P28289 359 aa9.12□□□□□ -0.95
CCNC-201ENST00000326298 NDUFV1P49821 464 aa9.12□□□□□ -0.95
CCNC-201ENST00000326298 KCNC3Q14003 757 aa9.12□□□□□ -0.95
CCNC-201ENST00000326298 TMEM31Q5JXX7 168 aa9.12□□□□□ -0.95
CCNC-201ENST00000326298 PPP4R3AQ6IN85 833 aa9.12□□□□□ -0.95
CCNC-201ENST00000326298 KCNT2Q6UVM3 1135 aa9.12□□□□□ -0.95
CCNC-201ENST00000326298 ADHFE1Q8IWW8 467 aa9.12□□□□□ -0.95
CCNC-201ENST00000326298 EFHBQ8N7U6 833 aa9.12□□□□□ -0.95
CCNC-201ENST00000326298 SMRP1Q8NCR6 262 aa9.12□□□□□ -0.95
CCNC-201ENST00000326298 PRPF31Q8WWY3 499 aaKnown RBP9.12□□□□□ -0.95
CCNC-201ENST00000326298 AUTS2Q8WXX7 1259 aa9.12□□□□□ -0.95
CCNC-201ENST00000326298 GTF3C6Q969F1 213 aa9.12□□□□□ -0.95
CCNC-201ENST00000326298 SCLT1Q96NL6 688 aa9.12□□□□□ -0.95
CCNC-201ENST00000326298 TMEM117Q9H0C3 514 aa9.12□□□□□ -0.95
CCNC-201ENST00000326298 ELAC1Q9H777 363 aaKnown RBP9.12□□□□□ -0.95
CCNC-201ENST00000326298 CYP26B1Q9NR63 512 aa9.12□□□□□ -0.95
CCNC-201ENST00000326298 TLR9Q9NR96 1032 aa9.12□□□□□ -0.95
CCNC-201ENST00000326298 MUTYHQ9UIF7 546 aa9.12□□□□□ -0.95
CCNC-201ENST00000326298 CFAP54Q96N23 3096 aa9.12□□□□□ -0.95
CCNC-201ENST00000326298 GPR37L1O60883 481 aa9.11□□□□□ -0.95
CCNC-201ENST00000326298 HOXA11P31270 313 aaPredicted RBP9.11□□□□□ -0.95
CCNC-201ENST00000326298 NEK4P51957 841 aa9.11□□□□□ -0.95
CCNC-201ENST00000326298 PSMC5P62195 406 aa9.11□□□□□ -0.95
CCNC-201ENST00000326298 GUCY1B3Q02153 619 aa9.11□□□□□ -0.95
CCNC-201ENST00000326298 NAALADL2Q58DX5 795 aa9.11□□□□□ -0.95
CCNC-201ENST00000326298 NCAPH2Q6IBW4 605 aa9.11□□□□□ -0.95
CCNC-201ENST00000326298 LLGL2Q6P1M3 1020 aa9.11□□□□□ -0.95
CCNC-201ENST00000326298 RDM1Q8NG50 284 aa9.11□□□□□ -0.95
CCNC-201ENST00000326298 LXNQ9BS40 222 aa9.11□□□□□ -0.95
CCNC-201ENST00000326298 VN1R3Q9BXE9 311 aa9.11□□□□□ -0.95
CCNC-201ENST00000326298 TLE6Q9H808 572 aa9.11□□□□□ -0.95
CCNC-201ENST00000326298 XPNPEP1Q9NQW7 623 aa9.11□□□□□ -0.95
CCNC-201ENST00000326298 DNAJB4Q9UDY4 337 aa9.11□□□□□ -0.95
CCNC-201ENST00000326298 CD207Q9UJ71 328 aa9.11□□□□□ -0.95
CCNC-201ENST00000326298 USP15Q9Y4E8 981 aaPredicted RBP9.11□□□□□ -0.95
CCNC-201ENST00000326298 PCDHB12Q9Y5F1 795 aa9.11□□□□□ -0.95
CCNC-201ENST00000326298 ZNF318Q5VUA4 2279 aa9.11□□□□□ -0.95
CCNC-201ENST00000326298 SLITRK3O94933 977 aa9.11□□□□□ -0.95
CCNC-201ENST00000326298 EYA4O95677 639 aa9.11□□□□□ -0.95
CCNC-201ENST00000326298 NEFLP07196 543 aa9.11□□□□□ -0.95
CCNC-201ENST00000326298 SRGAP2CP0DJJ0 459 aa9.11□□□□□ -0.95
CCNC-201ENST00000326298 ZSCAN20P17040 1043 aaPredicted RBP9.11□□□□□ -0.95
CCNC-201ENST00000326298 SP100P23497 879 aaPredicted RBP9.11□□□□□ -0.95
CCNC-201ENST00000326298 PHKA2P46019 1235 aa9.11□□□□□ -0.95
CCNC-201ENST00000326298 QARSP47897 775 aaKnown RBP9.11□□□□□ -0.95
CCNC-201ENST00000326298 GALNT17Q6IS24 598 aa9.11□□□□□ -0.95
CCNC-201ENST00000326298 CPLX2Q6PUV4 134 aaKnown RBP9.11□□□□□ -0.95
CCNC-201ENST00000326298 ZNF280BQ86YH2 543 aa9.11□□□□□ -0.95
CCNC-201ENST00000326298 TCF25Q9BQ70 676 aa9.11□□□□□ -0.95
CCNC-201ENST00000326298 TMEM60Q9H2L4 133 aa9.11□□□□□ -0.95
CCNC-201ENST00000326298 DHX33Q9H6R0 707 aaKnown RBP9.11□□□□□ -0.95
CCNC-201ENST00000326298 PIN4Q9Y237 131 aaKnown RBP9.11□□□□□ -0.95
CCNC-201ENST00000326298 ANAPC15P60006 121 aa9.1□□□□□ -0.95
CCNC-201ENST00000326298 SMAD4Q13485 552 aaKnown RBP9.1□□□□□ -0.95
CCNC-201ENST00000326298 DUSP6Q16828 381 aa9.1□□□□□ -0.95
CCNC-201ENST00000326298 UBXN11Q5T124 520 aa9.1□□□□□ -0.95
CCNC-201ENST00000326298 SYCE2Q6PIF2 218 aa9.1□□□□□ -0.95
CCNC-201ENST00000326298 RNF135Q8IUD6 432 aa9.1□□□□□ -0.95
CCNC-201ENST00000326298 SLC39A11Q8N1S5 342 aa9.1□□□□□ -0.95
CCNC-201ENST00000326298 MRPS27Q92552 414 aaKnown RBP9.1□□□□□ -0.95
CCNC-201ENST00000326298 CEP170P1Q96L14 293 aa9.1□□□□□ -0.95
CCNC-201ENST00000326298 KIF2CQ99661 725 aa9.1□□□□□ -0.95
CCNC-201ENST00000326298 GCOM2Q9BZD3 368 aaPredicted RBP9.1□□□□□ -0.95
CCNC-201ENST00000326298 C22orf23Q9BZE7 217 aa9.1□□□□□ -0.95
CCNC-201ENST00000326298 RNF39Q9H2S5 420 aa9.1□□□□□ -0.95
CCNC-201ENST00000326298 F8W810 466 aa9.09□□□□□ -0.95
CCNC-201ENST00000326298 WEE2P0C1S8 567 aa9.09□□□□□ -0.95
CCNC-201ENST00000326298 YWHABP31946 246 aaKnown RBP9.09□□□□□ -0.95
CCNC-201ENST00000326298 BCAR1P56945 870 aa9.09□□□□□ -0.95
CCNC-201ENST00000326298 LAMTOR4Q0VGL1 99 aa9.09□□□□□ -0.95
CCNC-201ENST00000326298 COASYQ13057 564 aa9.09□□□□□ -0.95
CCNC-201ENST00000326298 TWF2Q6IBS0 349 aaKnown RBP9.09□□□□□ -0.95
CCNC-201ENST00000326298 AGMOQ6ZNB7 445 aa9.09□□□□□ -0.95
CCNC-201ENST00000326298 TPH2Q8IWU9 490 aa9.09□□□□□ -0.95
CCNC-201ENST00000326298 DIS3L2Q8IYB7 885 aaKnown RBP9.09□□□□□ -0.95
CCNC-201ENST00000326298 FAM20AQ96MK3 541 aa9.09□□□□□ -0.95
CCNC-201ENST00000326298 HSD17B14Q9BPX1 270 aa9.09□□□□□ -0.95
CCNC-201ENST00000326298 S1PR5Q9H228 398 aa9.09□□□□□ -0.95
CCNC-201ENST00000326298 TBC1D13Q9NVG8 400 aa9.09□□□□□ -0.95
CCNC-201ENST00000326298 INPP5FQ9Y2H2 1132 aa9.09□□□□□ -0.95
CCNC-201ENST00000326298 HES2Q9Y543 173 aa9.09□□□□□ -0.95
CCNC-201ENST00000326298 COL4A3BPQ9Y5P4 624 aa9.09□□□□□ -0.95
CCNC-201ENST00000326298 FRYLO94915 3013 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms