RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 FAN1Q9Y2M0 1017 aa23.31■■□□□ 1.32
LIMS2-201ENST00000324938 KRT13P13646 458 aa23.3■■□□□ 1.32
LIMS2-201ENST00000324938 JAK3P52333 1124 aa23.3■■□□□ 1.32
LIMS2-201ENST00000324938 UGCGQ16739 394 aa23.3■■□□□ 1.32
LIMS2-201ENST00000324938 INTS8Q75QN2 995 aaKnown RBP23.3■■□□□ 1.32
LIMS2-201ENST00000324938 LNX1Q8TBB1 728 aaPredicted RBP23.3■■□□□ 1.32
LIMS2-201ENST00000324938 SYT11Q9BT88 431 aa23.3■■□□□ 1.32
LIMS2-201ENST00000324938 VWA5AO00534 786 aa23.3■■□□□ 1.32
LIMS2-201ENST00000324938 KIF4AO95239 1232 aa23.3■■□□□ 1.32
LIMS2-201ENST00000324938 MYCLP12524 364 aaPredicted RBP23.3■■□□□ 1.32
LIMS2-201ENST00000324938 NOP2P46087 812 aaKnown RBP23.3■■□□□ 1.32
LIMS2-201ENST00000324938 DNA2P51530 1060 aa23.3■■□□□ 1.32
LIMS2-201ENST00000324938 SLC7A5Q01650 507 aa23.3■■□□□ 1.32
LIMS2-201ENST00000324938 RPS6KA1Q15418 735 aa23.3■■□□□ 1.32
LIMS2-201ENST00000324938 MICALL2Q8IY33 904 aa23.3■■□□□ 1.32
LIMS2-201ENST00000324938 TPCN2Q8NHX9 752 aa23.3■■□□□ 1.32
LIMS2-201ENST00000324938 TAF4BQ92750 862 aa23.3■■□□□ 1.32
LIMS2-201ENST00000324938 CCDC43Q96MW1 224 aaKnown RBP23.3■■□□□ 1.32
LIMS2-201ENST00000324938 HACL1Q9UJ83 578 aa23.3■■□□□ 1.32
LIMS2-201ENST00000324938 LMNB1P20700 586 aa23.29■■□□□ 1.32
LIMS2-201ENST00000324938 SFNP31947 248 aa23.29■■□□□ 1.32
LIMS2-201ENST00000324938 GTF2BQ00403 316 aa23.29■■□□□ 1.32
LIMS2-201ENST00000324938 DNAAF5Q86Y56 855 aa23.29■■□□□ 1.32
LIMS2-201ENST00000324938 U2AF1L4Q8WU68 220 aaKnown RBP23.29■■□□□ 1.32
LIMS2-201ENST00000324938 GDAP1L1Q96MZ0 367 aa23.29■■□□□ 1.32
LIMS2-201ENST00000324938 WDR64B1ANS9 1081 aa23.29■■□□□ 1.32
LIMS2-201ENST00000324938 CCDC172P0C7W6 258 aa23.29■■□□□ 1.32
LIMS2-201ENST00000324938 GMPSP49915 693 aaPredicted RBP23.29■■□□□ 1.32
LIMS2-201ENST00000324938 EPHB4P54760 987 aa23.29■■□□□ 1.32
LIMS2-201ENST00000324938 PSMC5P62195 406 aa23.29■■□□□ 1.32
LIMS2-201ENST00000324938 KRT76Q01546 638 aa23.29■■□□□ 1.32
LIMS2-201ENST00000324938 SAMD7Q7Z3H4 446 aa23.29■■□□□ 1.32
LIMS2-201ENST00000324938 LMO3Q8TAP4 145 aa23.29■■□□□ 1.32
LIMS2-201ENST00000324938 BACH1O14867 736 aa23.28■■□□□ 1.32
LIMS2-201ENST00000324938 ATP9AO75110 1047 aa23.28■■□□□ 1.32
LIMS2-201ENST00000324938 SYF2O95926 243 aaKnown RBP23.28■■□□□ 1.32
LIMS2-201ENST00000324938 NPEPPSP55786 919 aa23.28■■□□□ 1.32
LIMS2-201ENST00000324938 SNRPFP62306 86 aaKnown RBP23.28■■□□□ 1.32
LIMS2-201ENST00000324938 MRPS25P82663 173 aaKnown RBP23.28■■□□□ 1.32
LIMS2-201ENST00000324938 NBPF12Q5TAG4 269 aaPredicted RBP23.28■■□□□ 1.32
LIMS2-201ENST00000324938 XRRA1Q6P2D8 792 aa23.28■■□□□ 1.32
LIMS2-201ENST00000324938 HAUS6Q7Z4H7 955 aa23.28■■□□□ 1.32
LIMS2-201ENST00000324938 SLFN11Q7Z7L1 901 aa23.28■■□□□ 1.32
LIMS2-201ENST00000324938 RDH13Q8NBN7 331 aa23.28■■□□□ 1.32
LIMS2-201ENST00000324938 ATG4CQ96DT6 458 aa23.28■■□□□ 1.32
LIMS2-201ENST00000324938 PBKQ96KB5 322 aa23.28■■□□□ 1.32
LIMS2-201ENST00000324938 NCANO14594 1321 aa23.28■■□□□ 1.32
LIMS2-201ENST00000324938 ERICH4A6NGS2 130 aa23.27■■□□□ 1.32
LIMS2-201ENST00000324938 TISP43B9A030 160 aa23.27■■□□□ 1.32
LIMS2-201ENST00000324938 MAPK13O15264 365 aa23.27■■□□□ 1.32
LIMS2-201ENST00000324938 CCNE2O96020 404 aa23.27■■□□□ 1.32
LIMS2-201ENST00000324938 NCKAP1LP55160 1127 aa23.27■■□□□ 1.32
LIMS2-201ENST00000324938 ARHGEF16Q5VV41 709 aa23.27■■□□□ 1.32
LIMS2-201ENST00000324938 DCAF15Q66K64 600 aa23.27■■□□□ 1.32
LIMS2-201ENST00000324938 NSMFQ6X4W1 530 aa23.27■■□□□ 1.32
LIMS2-201ENST00000324938 SCYL3Q8IZE3 742 aa23.27■■□□□ 1.32
LIMS2-201ENST00000324938 USP38Q8NB14 1042 aa23.27■■□□□ 1.32
LIMS2-201ENST00000324938 LMBR1Q8WVP7 490 aa23.27■■□□□ 1.32
LIMS2-201ENST00000324938 HINFPQ9BQA5 517 aa23.27■■□□□ 1.32
LIMS2-201ENST00000324938 RNF146Q9NTX7 359 aa23.27■■□□□ 1.32
LIMS2-201ENST00000324938 ANKEF1Q9NU02 776 aa23.27■■□□□ 1.32
LIMS2-201ENST00000324938 DOCK5Q9H7D0 1870 aa23.27■■□□□ 1.32
LIMS2-201ENST00000324938 P4HA2O15460 535 aa23.27■■□□□ 1.32
LIMS2-201ENST00000324938 VAMP7P51809 220 aa23.27■■□□□ 1.32
LIMS2-201ENST00000324938 BACE1P56817 501 aa23.27■■□□□ 1.32
LIMS2-201ENST00000324938 TBC1D10BQ4KMP7 808 aaPredicted RBP23.27■■□□□ 1.32
LIMS2-201ENST00000324938 EMBQ6PCB8 327 aa23.27■■□□□ 1.32
LIMS2-201ENST00000324938 SLC17A8Q8NDX2 589 aa23.27■■□□□ 1.32
LIMS2-201ENST00000324938 RDM1Q8NG50 284 aa23.27■■□□□ 1.32
LIMS2-201ENST00000324938 ZBTB9Q96C00 473 aa23.27■■□□□ 1.32
LIMS2-201ENST00000324938 WNK4Q96J92 1243 aa23.27■■□□□ 1.32
LIMS2-201ENST00000324938 CBWD1Q9BRT8 395 aa23.27■■□□□ 1.32
LIMS2-201ENST00000324938 PCIF1Q9H4Z3 704 aa23.27■■□□□ 1.32
LIMS2-201ENST00000324938 TMEM59LQ9UK28 342 aa23.27■■□□□ 1.32
LIMS2-201ENST00000324938 EMSYQ7Z589 1322 aa23.27■■□□□ 1.32
LIMS2-201ENST00000324938 TMEM150BA6NC51 233 aa23.26■■□□□ 1.31
LIMS2-201ENST00000324938 KCNK3O14649 394 aa23.26■■□□□ 1.31
LIMS2-201ENST00000324938 ZBTB48P10074 688 aaPredicted RBP23.26■■□□□ 1.31
LIMS2-201ENST00000324938 GALCP54803 685 aa23.26■■□□□ 1.31
LIMS2-201ENST00000324938 DLG4P78352 724 aa23.26■■□□□ 1.31
LIMS2-201ENST00000324938 KIF22Q14807 665 aa23.26■■□□□ 1.31
LIMS2-201ENST00000324938 PHLDB3Q6NSJ2 640 aa23.26■■□□□ 1.31
LIMS2-201ENST00000324938 SND1Q7KZF4 910 aaKnown RBP eCLIP23.26■■□□□ 1.31
LIMS2-201ENST00000324938 GLYCTKQ8IVS8 523 aa23.26■■□□□ 1.31
LIMS2-201ENST00000324938 XXYLT1Q8NBI6 393 aa23.26■■□□□ 1.31
LIMS2-201ENST00000324938 IWS1Q96ST2 819 aa23.26■■□□□ 1.31
LIMS2-201ENST00000324938 GOLPH3Q9H4A6 298 aa23.26■■□□□ 1.31
LIMS2-201ENST00000324938 GDF3Q9NR23 364 aa23.26■■□□□ 1.31
LIMS2-201ENST00000324938 HSPBP1Q9NZL4 362 aa23.26■■□□□ 1.31
LIMS2-201ENST00000324938 TCEAL9Q9UHQ7 104 aa23.26■■□□□ 1.31
LIMS2-201ENST00000324938 ZNF112Q9UJU3 913 aa23.26■■□□□ 1.31
LIMS2-201ENST00000324938 TESPA1A2RU30 521 aaPredicted RBP23.26■■□□□ 1.31
LIMS2-201ENST00000324938 SYCE1Q8N0S2 351 aa23.26■■□□□ 1.31
LIMS2-201ENST00000324938 CAVIN3Q969G5 261 aa23.26■■□□□ 1.31
LIMS2-201ENST00000324938 AS3MTQ9HBK9 375 aa23.26■■□□□ 1.31
LIMS2-201ENST00000324938 CNOT7Q9UIV1 285 aaKnown RBP23.26■■□□□ 1.31
LIMS2-201ENST00000324938 RIPK3Q9Y572 518 aa23.26■■□□□ 1.31
LIMS2-201ENST00000324938 LOC285556D6RIA3 1793 aa23.25■■□□□ 1.31
LIMS2-201ENST00000324938 CCDC66A2RUB6 948 aa23.25■■□□□ 1.31
LIMS2-201ENST00000324938 RNF40O75150 1001 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms