RNA–Protein interactions for RNA: ENST00000324554.9

USHBP1-202, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 2,402 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-202ENST00000324554 MKNK1Q9BUB5 465 aa17.48■□□□□ 0.39
USHBP1-202ENST00000324554 FAM169AQ9Y6X4 670 aa17.48■□□□□ 0.39
USHBP1-202ENST00000324554 PPP1R12BO60237 982 aaPredicted RBP17.48■□□□□ 0.39
USHBP1-202ENST00000324554 TBC1D12O60347 775 aa17.48■□□□□ 0.39
USHBP1-202ENST00000324554 GFPT2O94808 682 aa17.48■□□□□ 0.39
USHBP1-202ENST00000324554 FERP16591 822 aa17.48■□□□□ 0.39
USHBP1-202ENST00000324554 FMO5P49326 533 aa17.48■□□□□ 0.39
USHBP1-202ENST00000324554 PRKG1Q13976 671 aa17.48■□□□□ 0.39
USHBP1-202ENST00000324554 SCFD2Q8WU76 684 aa17.48■□□□□ 0.39
USHBP1-202ENST00000324554 UNC45AQ9H3U1 944 aa17.48■□□□□ 0.39
USHBP1-202ENST00000324554 SEL1LQ9UBV2 794 aa17.48■□□□□ 0.39
USHBP1-202ENST00000324554 UBE4BO95155 1302 aa17.47■□□□□ 0.39
USHBP1-202ENST00000324554 LTBP3Q9NS15 1303 aa17.47■□□□□ 0.39
USHBP1-202ENST00000324554 CEP104O60308 925 aa17.47■□□□□ 0.39
USHBP1-202ENST00000324554 H2AFZP0C0S5 128 aa17.47■□□□□ 0.39
USHBP1-202ENST00000324554 ARP10275 920 aa17.47■□□□□ 0.39
USHBP1-202ENST00000324554 MUTP22033 750 aa17.47■□□□□ 0.39
USHBP1-202ENST00000324554 STAT1P42224 750 aa17.47■□□□□ 0.39
USHBP1-202ENST00000324554 TTC31Q49AM3 519 aaPredicted RBP17.47■□□□□ 0.39
USHBP1-202ENST00000324554 H2AFVQ71UI9 128 aa17.47■□□□□ 0.39
USHBP1-202ENST00000324554 CD302Q8IX05 232 aa17.47■□□□□ 0.39
USHBP1-202ENST00000324554 FAM178BQ8IXR5 827 aa17.47■□□□□ 0.39
USHBP1-202ENST00000324554 OLIG1Q8TAK6 271 aa17.47■□□□□ 0.39
USHBP1-202ENST00000324554 PBKQ96KB5 322 aa17.47■□□□□ 0.39
USHBP1-202ENST00000324554 NACC1Q96RE7 527 aa17.47■□□□□ 0.39
USHBP1-202ENST00000324554 ZNF577Q9BSK1 485 aa17.47■□□□□ 0.39
USHBP1-202ENST00000324554 AP1M1Q9BXS5 423 aa17.47■□□□□ 0.39
USHBP1-202ENST00000324554 TAF1DQ9H5J8 278 aaPredicted RBP17.47■□□□□ 0.39
USHBP1-202ENST00000324554 A0A0A6YYK5 440 aaPredicted RBP17.47■□□□□ 0.39
USHBP1-202ENST00000324554 F8VZ95 297 aa17.47■□□□□ 0.39
USHBP1-202ENST00000324554 EVI5O60447 810 aa17.47■□□□□ 0.39
USHBP1-202ENST00000324554 CLSTN1O94985 981 aa17.47■□□□□ 0.39
USHBP1-202ENST00000324554 GUCY1A3Q02108 690 aa17.47■□□□□ 0.39
USHBP1-202ENST00000324554 B3GNT9Q6UX72 402 aa17.47■□□□□ 0.39
USHBP1-202ENST00000324554 KDM7AQ6ZMT4 941 aa17.47■□□□□ 0.39
USHBP1-202ENST00000324554 TADA2BQ86TJ2 420 aa17.47■□□□□ 0.39
USHBP1-202ENST00000324554 DDX42Q86XP3 938 aaKnown RBP eCLIP17.47■□□□□ 0.39
USHBP1-202ENST00000324554 LNX1Q8TBB1 728 aaPredicted RBP17.47■□□□□ 0.39
USHBP1-202ENST00000324554 ACTRT1Q8TDG2 376 aa17.47■□□□□ 0.39
USHBP1-202ENST00000324554 CHURC1Q8WUH1 139 aa17.47■□□□□ 0.39
USHBP1-202ENST00000324554 WDR11Q9BZH6 1224 aa17.47■□□□□ 0.39
USHBP1-202ENST00000324554 AGPAT3Q9NRZ7 376 aa17.47■□□□□ 0.39
USHBP1-202ENST00000324554 KCND2Q9NZV8 630 aa17.47■□□□□ 0.39
USHBP1-202ENST00000324554 INTUQ9ULD6 942 aa17.47■□□□□ 0.39
USHBP1-202ENST00000324554 ODF2LQ9ULJ1 636 aa17.47■□□□□ 0.39
USHBP1-202ENST00000324554 MRPL11Q9Y3B7 192 aaKnown RBP17.47■□□□□ 0.39
USHBP1-202ENST00000324554 ASNSP08243 561 aa17.46■□□□□ 0.39
USHBP1-202ENST00000324554 SOX5P35711 763 aa17.46■□□□□ 0.39
USHBP1-202ENST00000324554 HSPA9P38646 679 aaKnown RBP17.46■□□□□ 0.39
USHBP1-202ENST00000324554 TNFAIP1Q13829 316 aa17.46■□□□□ 0.39
USHBP1-202ENST00000324554 CBWD6Q4V339 395 aa17.46■□□□□ 0.39
USHBP1-202ENST00000324554 CBWD3Q5JTY5 395 aa17.46■□□□□ 0.39
USHBP1-202ENST00000324554 CBWD5Q5RIA9 395 aa17.46■□□□□ 0.39
USHBP1-202ENST00000324554 ODR4Q5SWX8 454 aa17.46■□□□□ 0.39
USHBP1-202ENST00000324554 HS2ST1Q7LGA3 356 aa17.46■□□□□ 0.39
USHBP1-202ENST00000324554 SLFN11Q7Z7L1 901 aa17.46■□□□□ 0.39
USHBP1-202ENST00000324554 METTL13Q8N6R0 699 aa17.46■□□□□ 0.39
USHBP1-202ENST00000324554 U2AF1L4Q8WU68 220 aaKnown RBP17.46■□□□□ 0.39
USHBP1-202ENST00000324554 ZKSCAN4Q969J2 545 aaPredicted RBP17.46■□□□□ 0.39
USHBP1-202ENST00000324554 ISCUQ9H1K1 167 aa17.46■□□□□ 0.39
USHBP1-202ENST00000324554 VCPKMTQ9H867 229 aa17.46■□□□□ 0.39
USHBP1-202ENST00000324554 EHMT1Q9H9B1 1298 aa17.46■□□□□ 0.39
USHBP1-202ENST00000324554 DMAC2Q9NW81 257 aa17.46■□□□□ 0.39
USHBP1-202ENST00000324554 PLAAQ9Y263 795 aa17.46■□□□□ 0.39
USHBP1-202ENST00000324554 A0A087WUV0 522 aaPredicted RBP17.46■□□□□ 0.38
USHBP1-202ENST00000324554 ZEB2O60315 1214 aa17.46■□□□□ 0.38
USHBP1-202ENST00000324554 DDNO94850 711 aaPredicted RBP17.46■□□□□ 0.38
USHBP1-202ENST00000324554 CYP2J2P51589 502 aa17.46■□□□□ 0.38
USHBP1-202ENST00000324554 SETQ01105 290 aaPredicted RBP17.46■□□□□ 0.38
USHBP1-202ENST00000324554 HLTFQ14527 1009 aaKnown RBP eCLIP17.46■□□□□ 0.38
USHBP1-202ENST00000324554 SLC30A5Q8TAD4 765 aa17.46■□□□□ 0.38
USHBP1-202ENST00000324554 LXNQ9BS40 222 aa17.46■□□□□ 0.38
USHBP1-202ENST00000324554 STK33Q9BYT3 514 aa17.46■□□□□ 0.38
USHBP1-202ENST00000324554 NR1D1P20393 614 aa17.45■□□□□ 0.38
USHBP1-202ENST00000324554 HIRAP54198 1017 aaPredicted RBP17.45■□□□□ 0.38
USHBP1-202ENST00000324554 STXBP4Q6ZWJ1 553 aa17.45■□□□□ 0.38
USHBP1-202ENST00000324554 TEKT3Q9BXF9 490 aa17.45■□□□□ 0.38
USHBP1-202ENST00000324554 GPR88Q9GZN0 384 aa17.45■□□□□ 0.38
USHBP1-202ENST00000324554 NEUROG2Q9H2A3 272 aa17.45■□□□□ 0.38
USHBP1-202ENST00000324554 DNAJC12Q9UKB3 198 aa17.45■□□□□ 0.38
USHBP1-202ENST00000324554 STXBP5LQ9Y2K9 1186 aa17.45■□□□□ 0.38
USHBP1-202ENST00000324554 FRMD4BQ9Y2L6 1034 aa17.45■□□□□ 0.38
USHBP1-202ENST00000324554 NOC2LQ9Y3T9 749 aaKnown RBP17.45■□□□□ 0.38
USHBP1-202ENST00000324554 NDUFAB1O14561 156 aa17.45■□□□□ 0.38
USHBP1-202ENST00000324554 SART1O43290 800 aaKnown RBP17.45■□□□□ 0.38
USHBP1-202ENST00000324554 TRIM49P0CI25 452 aa17.45■□□□□ 0.38
USHBP1-202ENST00000324554 TRIM49CP0CI26 452 aa17.45■□□□□ 0.38
USHBP1-202ENST00000324554 GUCY2CP25092 1073 aa17.45■□□□□ 0.38
USHBP1-202ENST00000324554 LSP1P33241 339 aa17.45■□□□□ 0.38
USHBP1-202ENST00000324554 DRAP1Q14919 205 aaPredicted RBP17.45■□□□□ 0.38
USHBP1-202ENST00000324554 EMC10Q5UCC4 262 aa17.45■□□□□ 0.38
USHBP1-202ENST00000324554 PEX26Q7Z412 305 aa17.45■□□□□ 0.38
USHBP1-202ENST00000324554 ATP6V1G3Q96LB4 118 aa17.45■□□□□ 0.38
USHBP1-202ENST00000324554 DDX47Q9H0S4 455 aaKnown RBP17.45■□□□□ 0.38
USHBP1-202ENST00000324554 TMCO5BA8MYB1 307 aa17.44■□□□□ 0.38
USHBP1-202ENST00000324554 PGRMC1O00264 195 aaKnown RBP17.44■□□□□ 0.38
USHBP1-202ENST00000324554 IPO5O00410 1097 aaKnown RBP17.44■□□□□ 0.38
USHBP1-202ENST00000324554 PLA2G6O60733 806 aa17.44■□□□□ 0.38
USHBP1-202ENST00000324554 CPP00450 1065 aa17.44■□□□□ 0.38
USHBP1-202ENST00000324554 ITGA4P13612 1032 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms