RNA–Protein interactions for RNA: ENST00000324266.9

TRAPPC12-201, Transcript of trafficking protein particle complex 12, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAPPC12, Length 2,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-201ENST00000324266 DEFB132Q7Z7B7 95 aa19.6■□□□□ 0.73
TRAPPC12-201ENST00000324266 COL23A1Q86Y22 540 aaPredicted RBP19.6■□□□□ 0.73
TRAPPC12-201ENST00000324266 RBM41Q96IZ5 413 aaKnown RBP19.6■□□□□ 0.73
TRAPPC12-201ENST00000324266 KCNMB3Q9NPA1 279 aa19.6■□□□□ 0.73
TRAPPC12-201ENST00000324266 PPANQ9NQ55 473 aaKnown RBP19.6■□□□□ 0.73
TRAPPC12-201ENST00000324266 SLC5A4Q9NY91 659 aa19.6■□□□□ 0.73
TRAPPC12-201ENST00000324266 NOP53Q9NZM5 478 aaKnown RBP19.6■□□□□ 0.73
TRAPPC12-201ENST00000324266 ZFATQ9P243 1243 aa19.6■□□□□ 0.73
TRAPPC12-201ENST00000324266 RSPH10B2B2RC85 870 aa19.59■□□□□ 0.73
TRAPPC12-201ENST00000324266 HMGB1P1B2RPK0 211 aaPredicted RBP19.59■□□□□ 0.73
TRAPPC12-201ENST00000324266 C6orf229H3BNL8 230 aa19.59■□□□□ 0.73
TRAPPC12-201ENST00000324266 RSPH10BP0C881 870 aa19.59■□□□□ 0.73
TRAPPC12-201ENST00000324266 CASP4P49662 377 aa19.59■□□□□ 0.73
TRAPPC12-201ENST00000324266 ATL2Q8NHH9 583 aa19.59■□□□□ 0.73
TRAPPC12-201ENST00000324266 TPCN2Q8NHX9 752 aa19.59■□□□□ 0.73
TRAPPC12-201ENST00000324266 REEP2Q9BRK0 252 aa19.59■□□□□ 0.73
TRAPPC12-201ENST00000324266 ANO3Q9BYT9 981 aa19.59■□□□□ 0.73
TRAPPC12-201ENST00000324266 PLCB1Q9NQ66 1216 aa19.59■□□□□ 0.73
TRAPPC12-201ENST00000324266 AMACRQ9UHK6 382 aa19.59■□□□□ 0.73
TRAPPC12-201ENST00000324266 SERPINB13Q9UIV8 391 aa19.59■□□□□ 0.73
TRAPPC12-201ENST00000324266 BTNL10A8MVZ5 291 aa19.59■□□□□ 0.73
TRAPPC12-201ENST00000324266 SMIM24O75264 130 aa19.59■□□□□ 0.73
TRAPPC12-201ENST00000324266 SHMT1P34896 483 aa19.59■□□□□ 0.73
TRAPPC12-201ENST00000324266 CTCFP49711 727 aaPredicted RBP19.59■□□□□ 0.73
TRAPPC12-201ENST00000324266 SNAP25P60880 206 aa19.59■□□□□ 0.73
TRAPPC12-201ENST00000324266 KNOP1Q1ED39 458 aaKnown RBP19.59■□□□□ 0.73
TRAPPC12-201ENST00000324266 SHROOM1Q2M3G4 852 aaPredicted RBP19.59■□□□□ 0.73
TRAPPC12-201ENST00000324266 QRICH1Q2TAL8 776 aa19.59■□□□□ 0.73
TRAPPC12-201ENST00000324266 LRRC23Q53EV4 343 aaPredicted RBP19.59■□□□□ 0.73
TRAPPC12-201ENST00000324266 PRR16Q569H4 304 aa19.59■□□□□ 0.73
TRAPPC12-201ENST00000324266 HIBCHQ6NVY1 386 aaPredicted RBP19.59■□□□□ 0.73
TRAPPC12-201ENST00000324266 ACTRT1Q8TDG2 376 aa19.59■□□□□ 0.73
TRAPPC12-201ENST00000324266 L3MBTL3Q96JM7 780 aaPredicted RBP19.59■□□□□ 0.73
TRAPPC12-201ENST00000324266 PBKQ96KB5 322 aa19.59■□□□□ 0.73
TRAPPC12-201ENST00000324266 P2RX7Q99572 595 aaKnown RBP19.59■□□□□ 0.73
TRAPPC12-201ENST00000324266 MXD3Q9BW11 206 aa19.59■□□□□ 0.73
TRAPPC12-201ENST00000324266 L3MBTL1Q9Y468 752 aa19.59■□□□□ 0.73
TRAPPC12-201ENST00000324266 PCDHA1Q9Y5I3 950 aa19.59■□□□□ 0.73
TRAPPC12-201ENST00000324266 GOLGA6L10A6NI86 522 aa19.58■□□□□ 0.73
TRAPPC12-201ENST00000324266 H0YGN5 161 aa19.58■□□□□ 0.73
TRAPPC12-201ENST00000324266 PGRMC1O00264 195 aaKnown RBP19.58■□□□□ 0.73
TRAPPC12-201ENST00000324266 RIMBP2O15034 1052 aa19.58■□□□□ 0.73
TRAPPC12-201ENST00000324266 CLIC2O15247 247 aa19.58■□□□□ 0.73
TRAPPC12-201ENST00000324266 ZBTB48P10074 688 aaPredicted RBP19.58■□□□□ 0.73
TRAPPC12-201ENST00000324266 XRCC5P13010 732 aaKnown RBP19.58■□□□□ 0.73
TRAPPC12-201ENST00000324266 CTNNA1P35221 906 aaKnown RBP19.58■□□□□ 0.73
TRAPPC12-201ENST00000324266 CD151P48509 253 aa19.58■□□□□ 0.73
TRAPPC12-201ENST00000324266 KCNA1Q09470 495 aa19.58■□□□□ 0.73
TRAPPC12-201ENST00000324266 PPP4R3CPQ6ZMV5 832 aa19.58■□□□□ 0.73
TRAPPC12-201ENST00000324266 TBC1D16Q8TBP0 767 aa19.58■□□□□ 0.73
TRAPPC12-201ENST00000324266 IKZF4Q9H2S9 585 aa19.58■□□□□ 0.73
TRAPPC12-201ENST00000324266 NFS1Q9Y697 457 aa19.58■□□□□ 0.73
TRAPPC12-201ENST00000324266 ATAD5Q96QE3 1844 aa19.58■□□□□ 0.72
TRAPPC12-201ENST00000324266 GCOM1H8Y6P7 765 aaPredicted RBP19.58■□□□□ 0.72
TRAPPC12-201ENST00000324266 KRIT1O00522 736 aa19.58■□□□□ 0.72
TRAPPC12-201ENST00000324266 MYZAPP0CAP1 466 aa19.58■□□□□ 0.72
TRAPPC12-201ENST00000324266 RIPK1Q13546 671 aa19.58■□□□□ 0.72
TRAPPC12-201ENST00000324266 PEX26Q7Z412 305 aa19.58■□□□□ 0.72
TRAPPC12-201ENST00000324266 FRMD5Q7Z6J6 570 aa19.58■□□□□ 0.72
TRAPPC12-201ENST00000324266 UBLCP1Q8WVY7 318 aaPredicted RBP19.58■□□□□ 0.72
TRAPPC12-201ENST00000324266 CNKSR1Q969H4 720 aa19.58■□□□□ 0.72
TRAPPC12-201ENST00000324266 DAPK3O43293 454 aa19.57■□□□□ 0.72
TRAPPC12-201ENST00000324266 ATP2C2O75185 946 aa19.57■□□□□ 0.72
TRAPPC12-201ENST00000324266 ZNF844Q08AG5 666 aa19.57■□□□□ 0.72
TRAPPC12-201ENST00000324266 EPHA7Q15375 998 aa19.57■□□□□ 0.72
TRAPPC12-201ENST00000324266 C10orf76Q5T2E6 689 aa19.57■□□□□ 0.72
TRAPPC12-201ENST00000324266 GPATCH4Q5T3I0 446 aaKnown RBP19.57■□□□□ 0.72
TRAPPC12-201ENST00000324266 P3H4Q92791 437 aa19.57■□□□□ 0.72
TRAPPC12-201ENST00000324266 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.57■□□□□ 0.723e-7■■□□□ 13.8
TRAPPC12-201ENST00000324266 CELF4Q9BZC1 486 aaKnown RBP19.57■□□□□ 0.72
TRAPPC12-201ENST00000324266 FBXL5Q9UKA1 691 aa19.57■□□□□ 0.72
TRAPPC12-201ENST00000324266 TRAF3IP3Q9Y228 551 aa19.57■□□□□ 0.72
TRAPPC12-201ENST00000324266 CES2O00748 559 aa19.57■□□□□ 0.72
TRAPPC12-201ENST00000324266 TAL1P17542 331 aaPredicted RBP19.57■□□□□ 0.72
TRAPPC12-201ENST00000324266 TMOD1P28289 359 aa19.57■□□□□ 0.72
TRAPPC12-201ENST00000324266 CYP4A11Q02928 519 aa19.57■□□□□ 0.72
TRAPPC12-201ENST00000324266 MKRN4PQ13434 485 aaPredicted RBP19.57■□□□□ 0.72
TRAPPC12-201ENST00000324266 U2AF1L4Q8WU68 220 aaKnown RBP19.57■□□□□ 0.72
TRAPPC12-201ENST00000324266 HVCN1Q96D96 273 aa19.57■□□□□ 0.72
TRAPPC12-201ENST00000324266 CCDC97Q96F63 343 aaPredicted RBP19.57■□□□□ 0.72
TRAPPC12-201ENST00000324266 SIX2Q9NPC8 291 aa19.57■□□□□ 0.72
TRAPPC12-201ENST00000324266 PITPNM2Q9BZ72 1349 aa19.56■□□□□ 0.72
TRAPPC12-201ENST00000324266 A0A1B0GVG6 124 aa19.56■□□□□ 0.72
TRAPPC12-201ENST00000324266 FAM196BA6NMK8 535 aa19.56■□□□□ 0.72
TRAPPC12-201ENST00000324266 DDX3XO00571 662 aaKnown RBP eCLIP19.56■□□□□ 0.722e-6■■□□□ 11.9
TRAPPC12-201ENST00000324266 GHRP10912 638 aa19.56■□□□□ 0.72
TRAPPC12-201ENST00000324266 SCNN1DP51172 638 aa19.56■□□□□ 0.72
TRAPPC12-201ENST00000324266 SPIRE1Q08AE8 756 aa19.56■□□□□ 0.72
TRAPPC12-201ENST00000324266 CUL1Q13616 776 aa19.56■□□□□ 0.72
TRAPPC12-201ENST00000324266 PPP1R7Q15435 360 aa19.56■□□□□ 0.72
TRAPPC12-201ENST00000324266 SDCCAG8Q86SQ7 713 aaPredicted RBP19.56■□□□□ 0.72
TRAPPC12-201ENST00000324266 DAAM2Q86T65 1068 aa19.56■□□□□ 0.72
TRAPPC12-201ENST00000324266 ZCWPW1Q9H0M4 648 aa19.56■□□□□ 0.72
TRAPPC12-201ENST00000324266 LRRC4CQ9HCJ2 640 aa19.56■□□□□ 0.72
TRAPPC12-201ENST00000324266 PCDHB13Q9Y5F0 798 aa19.56■□□□□ 0.72
TRAPPC12-201ENST00000324266 SFI1A8K8P3 1242 aa19.56■□□□□ 0.72
TRAPPC12-201ENST00000324266 BACH1O14867 736 aa19.56■□□□□ 0.72
TRAPPC12-201ENST00000324266 TTI1O43156 1089 aa19.56■□□□□ 0.72
TRAPPC12-201ENST00000324266 DIAPH2O60879 1101 aa19.56■□□□□ 0.72
TRAPPC12-201ENST00000324266 FLOT1O75955 427 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms