RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 DGKKQ5KSL6 1271 aa7.73□□□□□ -1.17
CSTF3-201ENST00000323959 KCNV1Q6PIU1 500 aa7.73□□□□□ -1.17
CSTF3-201ENST00000323959 TMPRSS7Q7RTY8 843 aa7.73□□□□□ -1.17
CSTF3-201ENST00000323959 DDX53Q86TM3 631 aaKnown RBP7.73□□□□□ -1.17
CSTF3-201ENST00000323959 FMNL3Q8IVF7 1028 aa7.73□□□□□ -1.17
CSTF3-201ENST00000323959 ZNF512BQ96KM6 892 aaPredicted RBP7.73□□□□□ -1.17
CSTF3-201ENST00000323959 C16orf70Q9BSU1 422 aa7.73□□□□□ -1.17
CSTF3-201ENST00000323959 TMEM161AQ9NX61 479 aa7.73□□□□□ -1.17
CSTF3-201ENST00000323959 KIAA1522Q9P206 1035 aaPredicted RBP7.73□□□□□ -1.17
CSTF3-201ENST00000323959 RRP8O43159 456 aaKnown RBP7.73□□□□□ -1.17
CSTF3-201ENST00000323959 CD72P21854 359 aa7.73□□□□□ -1.17
CSTF3-201ENST00000323959 CD52P31358 61 aa7.73□□□□□ -1.17
CSTF3-201ENST00000323959 CDK8P49336 464 aa7.73□□□□□ -1.17
CSTF3-201ENST00000323959 STAT2P52630 851 aa7.73□□□□□ -1.17
CSTF3-201ENST00000323959 GET4Q7L5D6 327 aaPredicted RBP7.73□□□□□ -1.17
CSTF3-201ENST00000323959 ZDHHC7Q9NXF8 308 aa7.73□□□□□ -1.17
CSTF3-201ENST00000323959 CCPG1Q9ULG6 757 aa7.73□□□□□ -1.17
CSTF3-201ENST00000323959 MYO5AQ9Y4I1 1855 aaKnown RBP7.73□□□□□ -1.17
CSTF3-201ENST00000323959 CCDC171Q6TFL3 1326 aa7.72□□□□□ -1.17
CSTF3-201ENST00000323959 AFPP02771 609 aaKnown RBP7.72□□□□□ -1.17
CSTF3-201ENST00000323959 FSHRP23945 695 aa7.72□□□□□ -1.17
CSTF3-201ENST00000323959 ADSSP30520 456 aa7.72□□□□□ -1.17
CSTF3-201ENST00000323959 CA8P35219 290 aa7.72□□□□□ -1.17
CSTF3-201ENST00000323959 MRPS6P82932 125 aaKnown RBP7.72□□□□□ -1.17
CSTF3-201ENST00000323959 PAK2Q13177 524 aa7.72□□□□□ -1.17
CSTF3-201ENST00000323959 LY6KQ17RY6 165 aa7.72□□□□□ -1.17
CSTF3-201ENST00000323959 HEATR6Q6AI08 1181 aaKnown RBP7.72□□□□□ -1.17
CSTF3-201ENST00000323959 PARM1Q6UWI2 310 aa7.72□□□□□ -1.17
CSTF3-201ENST00000323959 AMOTL1Q8IY63 956 aa7.72□□□□□ -1.17
CSTF3-201ENST00000323959 SYNPOQ8N3V7 929 aa7.72□□□□□ -1.17
CSTF3-201ENST00000323959 BAP1Q92560 729 aa7.72□□□□□ -1.17
CSTF3-201ENST00000323959 RNPEPQ9H4A4 650 aa7.72□□□□□ -1.17
CSTF3-201ENST00000323959 CCDC195A0A1B0GUA6 201 aa7.72□□□□□ -1.17
CSTF3-201ENST00000323959 UBTFL1P0CB47 393 aaPredicted RBP7.72□□□□□ -1.17
CSTF3-201ENST00000323959 CHRNB1P11230 501 aa7.72□□□□□ -1.17
CSTF3-201ENST00000323959 PDCD7Q8N8D1 485 aaKnown RBP7.72□□□□□ -1.17
CSTF3-201ENST00000323959 FGF14Q92915 247 aa7.72□□□□□ -1.17
CSTF3-201ENST00000323959 IWS1Q96ST2 819 aa7.72□□□□□ -1.17
CSTF3-201ENST00000323959 DUSP15Q9H1R2 295 aaPredicted RBP7.72□□□□□ -1.17
CSTF3-201ENST00000323959 MAN1C1Q9NR34 630 aa7.72□□□□□ -1.17
CSTF3-201ENST00000323959 RGS18Q9NS28 235 aa7.72□□□□□ -1.17
CSTF3-201ENST00000323959 DNMT3LQ9UJW3 386 aa7.72□□□□□ -1.17
CSTF3-201ENST00000323959 CDY2AQ9Y6F7 541 aa7.72□□□□□ -1.17
CSTF3-201ENST00000323959 PTPRBP23467 1997 aa7.71□□□□□ -1.17
CSTF3-201ENST00000323959 H3BRB1 525 aa7.71□□□□□ -1.17
CSTF3-201ENST00000323959 EIF2S3P41091 472 aaKnown RBP7.71□□□□□ -1.17
CSTF3-201ENST00000323959 VPS52Q8N1B4 723 aa7.71□□□□□ -1.17
CSTF3-201ENST00000323959 RGS22Q8NE09 1264 aa7.71□□□□□ -1.17
CSTF3-201ENST00000323959 ZNF707Q96C28 371 aaPredicted RBP7.71□□□□□ -1.17
CSTF3-201ENST00000323959 TMEM169Q96HH4 297 aa7.71□□□□□ -1.17
CSTF3-201ENST00000323959 GMCL1Q96IK5 515 aa7.71□□□□□ -1.17
CSTF3-201ENST00000323959 PSMG3-AS1Q96PY0 264 aa7.71□□□□□ -1.17
CSTF3-201ENST00000323959 RIOK1Q9BRS2 568 aaKnown RBP7.71□□□□□ -1.17
CSTF3-201ENST00000323959 TUT1Q9H6E5 874 aaKnown RBP7.71□□□□□ -1.17
CSTF3-201ENST00000323959 AGO3Q9H9G7 860 aaKnown RBP7.71□□□□□ -1.17
CSTF3-201ENST00000323959 NDRG2Q9UN36 371 aaKnown RBP7.71□□□□□ -1.17
CSTF3-201ENST00000323959 SSX2IPQ9Y2D8 614 aa7.71□□□□□ -1.17
CSTF3-201ENST00000323959 TRPV2Q9Y5S1 764 aa7.71□□□□□ -1.17
CSTF3-201ENST00000323959 C8AP07357 584 aa7.71□□□□□ -1.18
CSTF3-201ENST00000323959 FAM189BP81408 668 aa7.71□□□□□ -1.18
CSTF3-201ENST00000323959 CYP4F3Q08477 520 aa7.71□□□□□ -1.18
CSTF3-201ENST00000323959 SLC24A5Q71RS6 500 aa7.71□□□□□ -1.18
CSTF3-201ENST00000323959 ERC1Q8IUD2 1116 aa7.71□□□□□ -1.18
CSTF3-201ENST00000323959 HDDC3Q8N4P3 179 aa7.71□□□□□ -1.18
CSTF3-201ENST00000323959 FAM3CQ92520 227 aa7.71□□□□□ -1.18
CSTF3-201ENST00000323959 DCBLD2Q96PD2 775 aa7.71□□□□□ -1.18
CSTF3-201ENST00000323959 KALRNO60229 2985 aa7.71□□□□□ -1.18
CSTF3-201ENST00000323959 KDM3AQ9Y4C1 1321 aa7.71□□□□□ -1.18
CSTF3-201ENST00000323959 RPL17P18621 184 aaKnown RBP7.71□□□□□ -1.18
CSTF3-201ENST00000323959 KLRC2P26717 231 aa7.71□□□□□ -1.18
CSTF3-201ENST00000323959 CREB5Q02930 508 aa7.71□□□□□ -1.18
CSTF3-201ENST00000323959 SLC30A10Q6XR72 485 aa7.71□□□□□ -1.18
CSTF3-201ENST00000323959 RNF207Q6ZRF8 634 aa7.71□□□□□ -1.18
CSTF3-201ENST00000323959 TOGARAM2Q6ZUX3 1019 aa7.71□□□□□ -1.18
CSTF3-201ENST00000323959 CHST3Q7LGC8 479 aa7.71□□□□□ -1.18
CSTF3-201ENST00000323959 GLRX5Q86SX6 157 aa7.71□□□□□ -1.18
CSTF3-201ENST00000323959 MIGA1Q8NAN2 632 aa7.71□□□□□ -1.18
CSTF3-201ENST00000323959 FEZF2Q8TBJ5 459 aa7.71□□□□□ -1.18
CSTF3-201ENST00000323959 RPP25Q9BUL9 199 aaKnown RBP7.71□□□□□ -1.18
CSTF3-201ENST00000323959 MRPL9Q9BYD2 267 aaKnown RBP7.71□□□□□ -1.18
CSTF3-201ENST00000323959 PIDD1Q9HB75 910 aa7.71□□□□□ -1.18
CSTF3-201ENST00000323959 PTPDC1A2A3K4 754 aa7.7□□□□□ -1.18
CSTF3-201ENST00000323959 C9IYK1 514 aa7.7□□□□□ -1.18
CSTF3-201ENST00000323959 B4GALT3O60512 393 aa7.7□□□□□ -1.18
CSTF3-201ENST00000323959 POU2F2P09086 479 aa7.7□□□□□ -1.18
CSTF3-201ENST00000323959 FTH1P19P0C7X4 201 aa7.7□□□□□ -1.18
CSTF3-201ENST00000323959 IER5Q5VY09 327 aa7.7□□□□□ -1.18
CSTF3-201ENST00000323959 ZNF280BQ86YH2 543 aa7.7□□□□□ -1.18
CSTF3-201ENST00000323959 TICAM1Q8IUC6 712 aa7.7□□□□□ -1.18
CSTF3-201ENST00000323959 PLEKHM2Q8IWE5 1019 aa7.7□□□□□ -1.18
CSTF3-201ENST00000323959 GALNT15Q8N3T1 639 aa7.7□□□□□ -1.18
CSTF3-201ENST00000323959 CASD1Q96PB1 797 aa7.7□□□□□ -1.18
CSTF3-201ENST00000323959 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.7□□□□□ -1.18
CSTF3-201ENST00000323959 FAM117AQ9C073 453 aa7.7□□□□□ -1.18
CSTF3-201ENST00000323959 PADI3Q9ULW8 664 aa7.7□□□□□ -1.18
CSTF3-201ENST00000323959 ARHGAP4P98171 946 aa7.7□□□□□ -1.18
CSTF3-201ENST00000323959 GAS6Q14393 721 aa7.7□□□□□ -1.18
CSTF3-201ENST00000323959 FAM102BQ5T8I3 360 aa7.7□□□□□ -1.18
CSTF3-201ENST00000323959 XKR5Q6UX68 686 aa7.7□□□□□ -1.18
CSTF3-201ENST00000323959 ATG14Q6ZNE5 492 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms