RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 ARMCX2Q7L311 632 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 NOP9Q86U38 636 aaKnown RBP10.34□□□□□ -0.75
COL12A1-201ENST00000322507 BPIFA3Q9BQP9 254 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 CEP152O94986 1710 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 LMTK3Q96Q04 1460 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 CERKLQ49MI3 558 aaPredicted RBP10.34□□□□□ -0.75
COL12A1-201ENST00000322507 TTC13Q8NBP0 860 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 A2ML1A8K2U0 1454 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 HSPD1P10809 573 aaKnown RBP10.33□□□□□ -0.76
COL12A1-201ENST00000322507 RNASE9P60153 205 aaKnown RBP10.33□□□□□ -0.76
COL12A1-201ENST00000322507 PHF21AQ96BD5 680 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 FBXO9Q9UK97 447 aaPredicted RBP10.33□□□□□ -0.76
COL12A1-201ENST00000322507 SERPING1P05155 500 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 KCNA6P17658 529 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 CCND1P24385 295 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 AKAP5P24588 427 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 PTGDRQ13258 359 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 RCN2Q14257 317 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 SRLQ86TD4 932 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 PROCA1Q8NCQ7 364 aaPredicted RBP10.33□□□□□ -0.76
COL12A1-201ENST00000322507 TMIEQ8NEW7 156 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 ACSBG1Q96GR2 724 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 APOL4Q9BPW4 351 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 PARVGQ9HBI0 331 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 PCDHA4Q9UN74 947 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 GOLGA8HP0CJ92 632 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 XPAP23025 273 aaPredicted RBP10.33□□□□□ -0.76
COL12A1-201ENST00000322507 TP53BP2Q13625 1128 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 CCDC157Q569K6 752 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 KLC2Q9H0B6 622 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 KIAA1586Q9HCI6 787 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 ARL4AP40617 200 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 ATXN3P54252 364 aaPredicted RBP10.33□□□□□ -0.76
COL12A1-201ENST00000322507 WDR64B1ANS9 1081 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 SNPHO15079 494 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 CYP2J2P51589 502 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 ADKP55263 362 aaKnown RBP10.33□□□□□ -0.76
COL12A1-201ENST00000322507 METTL13Q8N6R0 699 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 C18orf25Q96B23 403 aaPredicted RBP10.33□□□□□ -0.76
COL12A1-201ENST00000322507 CBFA2T3O75081 653 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 BNC1Q01954 994 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 XKR9Q5GH70 373 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 CNOT6LQ96LI5 555 aaKnown RBP10.33□□□□□ -0.76
COL12A1-201ENST00000322507 ACCSQ96QU6 501 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 FHDC1Q9C0D6 1143 aaPredicted RBP10.33□□□□□ -0.76
COL12A1-201ENST00000322507 PAPOLAP51003 745 aaKnown RBP10.33□□□□□ -0.76
COL12A1-201ENST00000322507 GUCY2FP51841 1108 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 SH3BP5LQ7L8J4 393 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 NEK9Q8TD19 979 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 ZBTB10Q96DT7 871 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 PPCSQ9HAB8 311 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 NLRC4Q9NPP4 1024 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 KRT37O76014 449 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 TJP3O95049 919 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 NR2F2P24468 414 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 ZBED6P86452 979 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 MKRN3Q13064 507 aaKnown RBP10.33□□□□□ -0.76
COL12A1-201ENST00000322507 PDIK1LQ8N165 341 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 TNKSO95271 1327 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 EIF3HO15372 352 aaKnown RBP eCLIP10.33□□□□□ -0.76
COL12A1-201ENST00000322507 ABCB4P21439 1286 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 AKR1D1P51857 326 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 RIPPLY1Q0D2K3 151 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 DYMQ7RTS9 669 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 METTL23Q86XA0 190 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 GYG2O15488 501 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 PSMA3P25788 255 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 MMRN1Q13201 1228 aa10.33□□□□□ -0.76
COL12A1-201ENST00000322507 NARS2Q96I59 477 aaKnown RBP10.33□□□□□ -0.76
COL12A1-201ENST00000322507 PLEKHG3A1L390 1219 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 SGK1O00141 431 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 SLC26A4O43511 780 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 SERPINB4P48594 390 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 TMEM259Q4ZIN3 620 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 MIS18BP1Q6P0N0 1132 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 TGFBRAP1Q8WUH2 860 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 RABGEF1Q9UJ41 708 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 PCDHA1Q9Y5I3 950 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 PTPRKQ15262 1439 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 AP3B1O00203 1094 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 ZSCAN20P17040 1043 aaPredicted RBP10.32□□□□□ -0.76
COL12A1-201ENST00000322507 GUCY2DQ02846 1103 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 CAPRIN1Q14444 709 aaKnown RBP10.32□□□□□ -0.76
COL12A1-201ENST00000322507 NSMFQ6X4W1 530 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 CENPUQ71F23 418 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 KANSL2Q9H9L4 492 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 PM20D2Q8IYS1 436 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 SYMPKQ92797 1274 aaKnown RBP10.32□□□□□ -0.76
COL12A1-201ENST00000322507 JARID2Q92833 1246 aaPredicted RBP10.32□□□□□ -0.76
COL12A1-201ENST00000322507 DMAP1Q9NPF5 467 aaPredicted RBP10.32□□□□□ -0.76
COL12A1-201ENST00000322507 BTG4Q9NY30 223 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 MTMR6Q9Y217 621 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 CAND2O75155 1236 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 CDH2P19022 906 aaPredicted RBP10.32□□□□□ -0.76
COL12A1-201ENST00000322507 LIFRP42702 1097 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 ICA1Q05084 483 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 RCSD1Q6JBY9 416 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 PPM1KQ8N3J5 372 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 GDAP1Q8TB36 358 aa10.32□□□□□ -0.76
COL12A1-201ENST00000322507 MMS19Q96T76 1030 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms