RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 SHC4Q6S5L8 630 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 TTC25Q96NG3 672 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 AMACRQ9UHK6 382 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 RWDD2AQ9UIY3 292 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 TRPC5Q9UL62 973 aaPredicted RBP9.45□□□□□ -0.9
SSBP2-201ENST00000320672 SUPT3HO75486 399 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 KLRK1P26718 216 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 PWP1Q13610 501 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 NCAPHQ15003 741 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 RINLQ6ZS11 566 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 PODNQ7Z5L7 613 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 RAB44Q7Z6P3 723 aaPredicted RBP9.45□□□□□ -0.9
SSBP2-201ENST00000320672 RPAINQ86UA6 219 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 SRBD1Q8N5C6 995 aaKnown RBP9.45□□□□□ -0.9
SSBP2-201ENST00000320672 ZNF280CQ8ND82 737 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 IWS1Q96ST2 819 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 MMTAG2Q9BU76 263 aaKnown RBP9.45□□□□□ -0.9
SSBP2-201ENST00000320672 NUP85Q9BW27 656 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 CAPN11Q9UMQ6 739 aa9.45□□□□□ -0.9
SSBP2-201ENST00000320672 ZNF518AQ6AHZ1 1483 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 SEMA3EO15041 775 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 ANXA13P27216 316 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 ZBED8Q8IZ13 594 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 ATP11CQ8NB49 1132 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 TYW1Q9NV66 732 aaKnown RBP9.44□□□□□ -0.9
SSBP2-201ENST00000320672 ZNF233A6NK53 670 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 TADA3O75528 432 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 ANP32DO95626 131 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.44□□□□□ -0.9
SSBP2-201ENST00000320672 TRIM4Q9C037 500 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 TRPV6Q9H1D0 765 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 POLR3FQ9H1D9 316 aaPredicted RBP9.44□□□□□ -0.9
SSBP2-201ENST00000320672 STAP2Q9UGK3 403 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 LZTS1Q9Y250 596 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 PALLDQ8WX93 1383 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 DIAPH2O60879 1101 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 SMTNL2Q2TAL5 461 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 C11orf96Q7Z7L8 435 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 DHTKD1Q96HY7 919 aaPredicted RBP9.44□□□□□ -0.9
SSBP2-201ENST00000320672 KLK14Q9P0G3 267 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 GUCY2CP25092 1073 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 INSRP06213 1382 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 TTC26A0AVF1 554 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 NR3C1P04150 777 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 GUCY1A3Q02108 690 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 FMR1Q06787 632 aaKnown RBP eCLIP9.44□□□□□ -0.91e-6■■□□□ 13.4
SSBP2-201ENST00000320672 PDIA2Q13087 525 aaKnown RBP9.44□□□□□ -0.9
SSBP2-201ENST00000320672 PDZD4Q76G19 769 aaPredicted RBP9.44□□□□□ -0.9
SSBP2-201ENST00000320672 TTLL6Q8N841 843 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 N4BP2L2Q92802 583 aaPredicted RBP9.44□□□□□ -0.9
SSBP2-201ENST00000320672 F5H6K3 240 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 PTPREP23469 700 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 KLRC3Q07444 240 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 TCEA2Q15560 299 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 KAT2BQ92831 832 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 IL1RL2Q9HB29 575 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 A8MXQ7 604 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 RASA4BC9J798 803 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 RASA4O43374 803 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 GPS1Q13098 491 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 PPP2R5BQ15173 497 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 ZNF699Q32M78 642 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 PAN2Q504Q3 1202 aaKnown RBP9.44□□□□□ -0.9
SSBP2-201ENST00000320672 ZNF667Q5HYK9 610 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 LAYNQ6UX15 382 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 L3MBTL3Q96JM7 780 aaPredicted RBP9.44□□□□□ -0.9
SSBP2-201ENST00000320672 POLR3CQ9BUI4 534 aaPredicted RBP9.44□□□□□ -0.9
SSBP2-201ENST00000320672 CASS4Q9NQ75 786 aa9.44□□□□□ -0.9
SSBP2-201ENST00000320672 ZSCAN9O15535 394 aaPredicted RBP9.43□□□□□ -0.9
SSBP2-201ENST00000320672 DYNC1LI2O43237 492 aaPredicted RBP9.43□□□□□ -0.9
SSBP2-201ENST00000320672 MMEP08473 750 aa9.43□□□□□ -0.9
SSBP2-201ENST00000320672 CPB1P15086 417 aa9.43□□□□□ -0.9
SSBP2-201ENST00000320672 CPA2P48052 419 aa9.43□□□□□ -0.9
SSBP2-201ENST00000320672 EPHB4P54760 987 aa9.43□□□□□ -0.9
SSBP2-201ENST00000320672 TUBB2AQ13885 445 aa9.43□□□□□ -0.9
SSBP2-201ENST00000320672 GABPB2Q8TAK5 448 aaPredicted RBP9.43□□□□□ -0.9
SSBP2-201ENST00000320672 HASPINQ8TF76 798 aa9.43□□□□□ -0.9
SSBP2-201ENST00000320672 NR1H4Q96RI1 486 aaPredicted RBP9.43□□□□□ -0.9
SSBP2-201ENST00000320672 TUBB2BQ9BVA1 445 aa9.43□□□□□ -0.9
SSBP2-201ENST00000320672 PITPNM3Q9BZ71 974 aa9.43□□□□□ -0.9
SSBP2-201ENST00000320672 DCP1AQ9NPI6 582 aaPredicted RBP9.43□□□□□ -0.9
SSBP2-201ENST00000320672 KRT14P02533 472 aa9.43□□□□□ -0.9
SSBP2-201ENST00000320672 MYBL1P10243 752 aa9.43□□□□□ -0.9
SSBP2-201ENST00000320672 GPATCH4Q5T3I0 446 aaKnown RBP9.43□□□□□ -0.9
SSBP2-201ENST00000320672 LY9Q9HBG7 655 aa9.43□□□□□ -0.9
SSBP2-201ENST00000320672 FOSP01100 380 aaPredicted RBP9.43□□□□□ -0.9
SSBP2-201ENST00000320672 GPC3P51654 580 aa9.43□□□□□ -0.9
SSBP2-201ENST00000320672 ALDH18A1P54886 795 aaKnown RBP9.43□□□□□ -0.9
SSBP2-201ENST00000320672 MTMR2Q13614 643 aa9.43□□□□□ -0.9
SSBP2-201ENST00000320672 RAD54LQ92698 747 aa9.43□□□□□ -0.9
SSBP2-201ENST00000320672 SDCCAG3Q96C92 435 aa9.43□□□□□ -0.9
SSBP2-201ENST00000320672 IFT43Q96FT9 208 aa9.43□□□□□ -0.9
SSBP2-201ENST00000320672 FMO2Q99518 471 aa9.43□□□□□ -0.9
SSBP2-201ENST00000320672 FAM49BQ9NUQ9 324 aa9.43□□□□□ -0.9
SSBP2-201ENST00000320672 ADA2Q9NZK5 511 aa9.43□□□□□ -0.9
SSBP2-201ENST00000320672 KIAA0556O60303 1618 aa9.43□□□□□ -0.9
SSBP2-201ENST00000320672 IFNAR1P17181 557 aa9.43□□□□□ -0.9
SSBP2-201ENST00000320672 RBBP7Q16576 425 aa9.43□□□□□ -0.9
SSBP2-201ENST00000320672 LONRF1Q17RB8 773 aa9.43□□□□□ -0.9
SSBP2-201ENST00000320672 ACBD5Q5T8D3 534 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms