RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 SPATC1LQ9H0A9 340 aa14.25□□□□□ -0.13
CPNE1-201ENST00000317677 MRPL44Q9H9J2 332 aaKnown RBP14.25□□□□□ -0.13
CPNE1-201ENST00000317677 TXNRD2Q9NNW7 524 aa14.25□□□□□ -0.13
CPNE1-201ENST00000317677 TRAF3IP3Q9Y228 551 aa14.25□□□□□ -0.13
CPNE1-201ENST00000317677 A0A0U1RQJ8 604 aa14.25□□□□□ -0.13
CPNE1-201ENST00000317677 ARHGEF35A5YM69 484 aa14.25□□□□□ -0.13
CPNE1-201ENST00000317677 EPHB6O15197 1021 aa14.25□□□□□ -0.13
CPNE1-201ENST00000317677 TGFB1I1O43294 461 aa14.25□□□□□ -0.13
CPNE1-201ENST00000317677 CA12O43570 354 aa14.25□□□□□ -0.13
CPNE1-201ENST00000317677 HIP1RO75146 1068 aa14.25□□□□□ -0.13
CPNE1-201ENST00000317677 KRT9P35527 623 aa14.25□□□□□ -0.13
CPNE1-201ENST00000317677 IRAK1P51617 712 aa14.25□□□□□ -0.13
CPNE1-201ENST00000317677 MARSP56192 900 aaKnown RBP14.25□□□□□ -0.13
CPNE1-201ENST00000317677 HERVK_113P62684 666 aa14.25□□□□□ -0.13
CPNE1-201ENST00000317677 SP2Q02086 613 aa14.25□□□□□ -0.13
CPNE1-201ENST00000317677 ZC2HC1CQ53FD0 456 aaPredicted RBP14.25□□□□□ -0.13
CPNE1-201ENST00000317677 ATRIPQ8WXE1 791 aa14.25□□□□□ -0.13
CPNE1-201ENST00000317677 CCDC51Q96ER9 411 aa14.25□□□□□ -0.13
CPNE1-201ENST00000317677 AGPAT5Q9NUQ2 364 aa14.25□□□□□ -0.13
CPNE1-201ENST00000317677 DBR1Q9UK59 544 aaKnown RBP14.25□□□□□ -0.13
CPNE1-201ENST00000317677 CAPN11Q9UMQ6 739 aa14.25□□□□□ -0.13
CPNE1-201ENST00000317677 AGTPBP1Q9UPW5 1226 aa14.25□□□□□ -0.13
CPNE1-201ENST00000317677 SAMM50Q9Y512 469 aa14.25□□□□□ -0.13
CPNE1-201ENST00000317677 SOWAHBA6NEL2 793 aa14.24□□□□□ -0.13
CPNE1-201ENST00000317677 LRRIQ3A6PVS8 624 aaPredicted RBP14.24□□□□□ -0.13
CPNE1-201ENST00000317677 STBD1O95210 358 aa14.24□□□□□ -0.13
CPNE1-201ENST00000317677 GCNT3O95395 438 aa14.24□□□□□ -0.13
CPNE1-201ENST00000317677 FGFR1OPO95684 399 aaKnown RBP14.24□□□□□ -0.13
CPNE1-201ENST00000317677 MCM3P25205 808 aa14.24□□□□□ -0.13
CPNE1-201ENST00000317677 RDXP35241 583 aaKnown RBP14.24□□□□□ -0.13
CPNE1-201ENST00000317677 KRT76Q01546 638 aa14.24□□□□□ -0.13
CPNE1-201ENST00000317677 EDRF1Q3B7T1 1238 aa14.24□□□□□ -0.13
CPNE1-201ENST00000317677 WDR59Q6PJI9 974 aa14.24□□□□□ -0.13
CPNE1-201ENST00000317677 PADI6Q6TGC4 694 aa14.24□□□□□ -0.13
CPNE1-201ENST00000317677 TRIM59Q8IWR1 403 aa14.24□□□□□ -0.13
CPNE1-201ENST00000317677 TNS4Q8IZW8 715 aa14.24□□□□□ -0.13
CPNE1-201ENST00000317677 MYCT1Q8N699 235 aa14.24□□□□□ -0.13
CPNE1-201ENST00000317677 CHP1Q99653 195 aa14.24□□□□□ -0.13
CPNE1-201ENST00000317677 SENP7Q9BQF6 1050 aa14.24□□□□□ -0.13
CPNE1-201ENST00000317677 PAGR1Q9BTK6 254 aa14.24□□□□□ -0.13
CPNE1-201ENST00000317677 STRA6Q9BX79 667 aa14.24□□□□□ -0.13
CPNE1-201ENST00000317677 MOV10L1Q9BXT6 1211 aaKnown RBP14.24□□□□□ -0.13
CPNE1-201ENST00000317677 PARVGQ9HBI0 331 aa14.24□□□□□ -0.13
CPNE1-201ENST00000317677 KCND2Q9NZV8 630 aa14.24□□□□□ -0.13
CPNE1-201ENST00000317677 ODF2LQ9ULJ1 636 aa14.24□□□□□ -0.13
CPNE1-201ENST00000317677 WDR64B1ANS9 1081 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 SPATA31C2B4DYI2 1134 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 BACH1O14867 736 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 PPP1R37O75864 691 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 JAK3P52333 1124 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 VSNL1P62760 191 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 KCNMA1Q12791 1236 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 ADAM9Q13443 819 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 ZKSCAN8Q15776 578 aaPredicted RBP14.23□□□□□ -0.13
CPNE1-201ENST00000317677 Q3C1V9 767 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 PPP4R3CPQ6ZMV5 832 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 B4GALNT4Q76KP1 1039 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 YTHDF3Q7Z739 585 aaKnown RBP14.23□□□□□ -0.13
CPNE1-201ENST00000317677 NLRX1Q86UT6 975 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 C4orf19Q8IY42 314 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 DNAJC7Q99615 494 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 MAF1Q9H063 256 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 RBPJLQ9UBG7 517 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 H0YHG0 523 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 PDXKO00764 312 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 ZNF862O60290 1169 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 SORBS3O60504 671 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 RTN2O75298 545 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 NR2F2P24468 414 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 YWHABP31946 246 aaKnown RBP14.23□□□□□ -0.13
CPNE1-201ENST00000317677 CCT5P48643 541 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 ALDH5A1P51649 535 aaPredicted RBP14.23□□□□□ -0.13
CPNE1-201ENST00000317677 SARNPP82979 210 aaKnown RBP14.23□□□□□ -0.13
CPNE1-201ENST00000317677 WHAMMP3Q1A5X7 153 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 PLA2G4FQ68DD2 849 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 ZNF746Q6NUN9 644 aaPredicted RBP14.23□□□□□ -0.13
CPNE1-201ENST00000317677 MAEAQ7L5Y9 396 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 ZNF720Q7Z2F6 126 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 ARMC9Q7Z3E5 817 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 ANKRD35Q8N283 1001 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 MAGEC3Q8TD91 643 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 SMCR8Q8TEV9 937 aaPredicted RBP14.23□□□□□ -0.13
CPNE1-201ENST00000317677 FGD4Q96M96 766 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 NAA15Q9BXJ9 866 aaKnown RBP14.23□□□□□ -0.13
CPNE1-201ENST00000317677 PLEKHA4Q9H4M7 779 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 SUGCTQ9HAC7 445 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 TYW1Q9NV66 732 aaKnown RBP14.23□□□□□ -0.13
CPNE1-201ENST00000317677 ADGRG1Q9Y653 693 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 NFASCO94856 1347 aa14.23□□□□□ -0.13
CPNE1-201ENST00000317677 EIF3DO15371 548 aaKnown RBP eCLIP14.22□□□□□ -0.13
CPNE1-201ENST00000317677 MAFGO15525 162 aa14.22□□□□□ -0.13
CPNE1-201ENST00000317677 PHACTR2O75167 634 aa14.22□□□□□ -0.13
CPNE1-201ENST00000317677 SFNP31947 248 aa14.22□□□□□ -0.13
CPNE1-201ENST00000317677 SSR1P43307 286 aaKnown RBP14.22□□□□□ -0.13
CPNE1-201ENST00000317677 CASP4P49662 377 aa14.22□□□□□ -0.13
CPNE1-201ENST00000317677 LBX1P52954 281 aa14.22□□□□□ -0.13
CPNE1-201ENST00000317677 NPEPPSP55786 919 aa14.22□□□□□ -0.13
CPNE1-201ENST00000317677 PSMC5P62195 406 aa14.22□□□□□ -0.13
CPNE1-201ENST00000317677 GRIK3Q13003 919 aa14.22□□□□□ -0.13
CPNE1-201ENST00000317677 PPFIA1Q13136 1202 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms