RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 SIPA1L1O43166 1804 aa20.68■□□□□ 0.9
RTN4-201ENST00000317610 UBE4BO95155 1302 aa20.68■□□□□ 0.9
RTN4-201ENST00000317610 ANKRD62A6NC57 917 aa20.68■□□□□ 0.9
RTN4-201ENST00000317610 SPDYE3A6NKU9 549 aa20.68■□□□□ 0.9
RTN4-201ENST00000317610 CYP4A11Q02928 519 aa20.68■□□□□ 0.9
RTN4-201ENST00000317610 MAPK7Q13164 816 aa20.68■□□□□ 0.9
RTN4-201ENST00000317610 CERS5Q8N5B7 392 aa20.68■□□□□ 0.9
RTN4-201ENST00000317610 MDM1Q8TC05 714 aa20.68■□□□□ 0.9
RTN4-201ENST00000317610 AMNQ9BXJ7 453 aa20.68■□□□□ 0.9
RTN4-201ENST00000317610 NYAP2Q9P242 653 aa20.68■□□□□ 0.9
RTN4-201ENST00000317610 POLD1P28340 1107 aa20.67■□□□□ 0.9
RTN4-201ENST00000317610 TCEAL1Q15170 157 aa20.67■□□□□ 0.9
RTN4-201ENST00000317610 SNCBQ16143 134 aa20.67■□□□□ 0.9
RTN4-201ENST00000317610 SLFN13Q68D06 897 aa20.67■□□□□ 0.9
RTN4-201ENST00000317610 ATXN2LQ8WWM7 1075 aaKnown RBP20.67■□□□□ 0.9
RTN4-201ENST00000317610 ALG3Q92685 438 aa20.67■□□□□ 0.9
RTN4-201ENST00000317610 ADAM7Q9H2U9 754 aa20.67■□□□□ 0.9
RTN4-201ENST00000317610 HAUS2Q9NVX0 235 aa20.67■□□□□ 0.9
RTN4-201ENST00000317610 DMAC2Q9NW81 257 aa20.67■□□□□ 0.9
RTN4-201ENST00000317610 ADAMTSL1Q8N6G6 1762 aa20.67■□□□□ 0.9
RTN4-201ENST00000317610 CCDC169A6NNP5 214 aa20.67■□□□□ 0.9
RTN4-201ENST00000317610 HSPA6P17066 643 aa20.67■□□□□ 0.9
RTN4-201ENST00000317610 ABCB4P21439 1286 aa20.67■□□□□ 0.9
RTN4-201ENST00000317610 HOXA10P31260 410 aaPredicted RBP20.67■□□□□ 0.9
RTN4-201ENST00000317610 RDXP35241 583 aaKnown RBP20.67■□□□□ 0.9
RTN4-201ENST00000317610 PTGIRP43119 386 aa20.67■□□□□ 0.9
RTN4-201ENST00000317610 PRPF4BQ13523 1007 aaKnown RBP20.67■□□□□ 0.9
RTN4-201ENST00000317610 KIF22Q14807 665 aa20.67■□□□□ 0.9
RTN4-201ENST00000317610 CDC42EP5Q6NZY7 148 aa20.67■□□□□ 0.9
RTN4-201ENST00000317610 GLG1Q92896 1179 aa20.67■□□□□ 0.9
RTN4-201ENST00000317610 RNF25Q96BH1 459 aaPredicted RBP20.67■□□□□ 0.9
RTN4-201ENST00000317610 HVCN1Q96D96 273 aa20.67■□□□□ 0.9
RTN4-201ENST00000317610 COA1Q9GZY4 146 aa20.67■□□□□ 0.9
RTN4-201ENST00000317610 INTS2Q9H0H0 1204 aaKnown RBP20.67■□□□□ 0.9
RTN4-201ENST00000317610 THAP2Q9H0W7 228 aa20.67■□□□□ 0.9
RTN4-201ENST00000317610 CNOT7Q9UIV1 285 aaKnown RBP20.67■□□□□ 0.9
RTN4-201ENST00000317610 COG5Q9UP83 839 aa20.67■□□□□ 0.9
RTN4-201ENST00000317610 C6orf229H3BNL8 230 aa20.66■□□□□ 0.9
RTN4-201ENST00000317610 EML1O00423 815 aa20.66■□□□□ 0.9
RTN4-201ENST00000317610 ASAP2O43150 1006 aa20.66■□□□□ 0.9
RTN4-201ENST00000317610 CTNND1O60716 968 aaKnown RBP20.66■□□□□ 0.9
RTN4-201ENST00000317610 TRIM37O94972 964 aa20.66■□□□□ 0.9
RTN4-201ENST00000317610 EEF2P13639 858 aaKnown RBP20.66■□□□□ 0.9
RTN4-201ENST00000317610 PPP2R5AQ15172 486 aa20.66■□□□□ 0.9
RTN4-201ENST00000317610 CBWD6Q4V339 395 aa20.66■□□□□ 0.9
RTN4-201ENST00000317610 CBWD3Q5JTY5 395 aa20.66■□□□□ 0.9
RTN4-201ENST00000317610 CBWD5Q5RIA9 395 aa20.66■□□□□ 0.9
RTN4-201ENST00000317610 DENND2CQ68D51 928 aa20.66■□□□□ 0.9
RTN4-201ENST00000317610 C1orf186Q6ZWK4 172 aa20.66■□□□□ 0.9
RTN4-201ENST00000317610 RHOT2Q8IXI1 618 aa20.66■□□□□ 0.9
RTN4-201ENST00000317610 TMEM109Q9BVC6 243 aa20.66■□□□□ 0.9
RTN4-201ENST00000317610 CXorf56Q9H5V9 222 aa20.66■□□□□ 0.9
RTN4-201ENST00000317610 DNAJC18Q9H819 358 aa20.66■□□□□ 0.9
RTN4-201ENST00000317610 GRHL1Q9NZI5 618 aa20.66■□□□□ 0.9
RTN4-201ENST00000317610 APEX2Q9UBZ4 518 aa20.66■□□□□ 0.9
RTN4-201ENST00000317610 RASAL2Q9UJF2 1139 aa20.66■□□□□ 0.9
RTN4-201ENST00000317610 PHF2O75151 1096 aa20.66■□□□□ 0.9
RTN4-201ENST00000317610 FAM13AO94988 1023 aa20.66■□□□□ 0.9
RTN4-201ENST00000317610 CYP3A4P08684 503 aa20.66■□□□□ 0.9
RTN4-201ENST00000317610 CHN1P15882 459 aa20.66■□□□□ 0.9
RTN4-201ENST00000317610 TNFAIP3P21580 790 aa20.66■□□□□ 0.9
RTN4-201ENST00000317610 NMT1P30419 496 aaKnown RBP20.66■□□□□ 0.9
RTN4-201ENST00000317610 GBP1P32455 592 aa20.66■□□□□ 0.9
RTN4-201ENST00000317610 C11orf63Q6NUN7 778 aa20.66■□□□□ 0.9
RTN4-201ENST00000317610 CROCCP2Q86T23 111 aa20.66■□□□□ 0.9
RTN4-201ENST00000317610 CCDC197Q8NCU1 140 aa20.66■□□□□ 0.9
RTN4-201ENST00000317610 FIZ1Q96SL8 496 aa20.66■□□□□ 0.9
RTN4-201ENST00000317610 HSD17B14Q9BPX1 270 aa20.66■□□□□ 0.9
RTN4-201ENST00000317610 IKZF4Q9H2S9 585 aa20.66■□□□□ 0.9
RTN4-201ENST00000317610 CCDC134Q9H6E4 229 aa20.66■□□□□ 0.9
RTN4-201ENST00000317610 TAS2R14Q9NYV8 317 aa20.66■□□□□ 0.9
RTN4-201ENST00000317610 RPTORQ8N122 1335 aa20.65■□□□□ 0.9
RTN4-201ENST00000317610 SYNGAP1Q96PV0 1343 aa20.65■□□□□ 0.9
RTN4-201ENST00000317610 LOC102724159A0A0B4J2E5 919 aa20.65■□□□□ 0.9
RTN4-201ENST00000317610 PPIP5K2O43314 1243 aa20.65■□□□□ 0.9
RTN4-201ENST00000317610 COPB2P35606 906 aa20.65■□□□□ 0.9
RTN4-201ENST00000317610 ITIH4Q14624 930 aa20.65■□□□□ 0.9
RTN4-201ENST00000317610 PWP2Q15269 919 aaKnown RBP20.65■□□□□ 0.9
RTN4-201ENST00000317610 PIGWQ7Z7B1 504 aa20.65■□□□□ 0.9
RTN4-201ENST00000317610 FAM228AQ86W67 206 aa20.65■□□□□ 0.9
RTN4-201ENST00000317610 COL23A1Q86Y22 540 aaPredicted RBP20.65■□□□□ 0.9
RTN4-201ENST00000317610 FBXO25Q8TCJ0 367 aa20.65■□□□□ 0.9
RTN4-201ENST00000317610 TUFT1Q9NNX1 390 aa20.65■□□□□ 0.9
RTN4-201ENST00000317610 RGL1Q9NZL6 768 aa20.65■□□□□ 0.9
RTN4-201ENST00000317610 PCYOX1Q9UHG3 505 aa20.65■□□□□ 0.9
RTN4-201ENST00000317610 MCM8Q9UJA3 840 aa20.65■□□□□ 0.9
RTN4-201ENST00000317610 SNX24Q9Y343 169 aa20.65■□□□□ 0.9
RTN4-201ENST00000317610 CCT8L1PA6NM43 557 aa20.65■□□□□ 0.9
RTN4-201ENST00000317610 SFI1A8K8P3 1242 aa20.65■□□□□ 0.9
RTN4-201ENST00000317610 MIF4GDA9UHW6 222 aaKnown RBP20.65■□□□□ 0.9
RTN4-201ENST00000317610 RFX1P22670 979 aa20.65■□□□□ 0.9
RTN4-201ENST00000317610 CHRNA3P32297 505 aa20.65■□□□□ 0.9
RTN4-201ENST00000317610 ZNF211Q13398 564 aaPredicted RBP20.65■□□□□ 0.9
RTN4-201ENST00000317610 GPATCH11Q8N954 259 aa20.65■□□□□ 0.9
RTN4-201ENST00000317610 C21orf2O43822 256 aa20.64■□□□□ 0.89
RTN4-201ENST00000317610 MMEP08473 750 aa20.64■□□□□ 0.89
RTN4-201ENST00000317610 PLTPP55058 493 aa20.64■□□□□ 0.89
RTN4-201ENST00000317610 CTTNQ14247 550 aaKnown RBP20.64■□□□□ 0.89
RTN4-201ENST00000317610 ZC2HC1CQ53FD0 456 aaPredicted RBP20.64■□□□□ 0.89
RTN4-201ENST00000317610 HHIPL2Q6UWX4 724 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms