RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 BSNDQ8WZ55 320 aa20.06■□□□□ 0.8
CCDC43-201ENST00000315286 SECISBP2LQ93073 1101 aaKnown RBP20.06■□□□□ 0.8
CCDC43-201ENST00000315286 KIFC3Q9BVG8 833 aa20.06■□□□□ 0.8
CCDC43-201ENST00000315286 HDAC6Q9UBN7 1215 aa20.06■□□□□ 0.8
CCDC43-201ENST00000315286 SEPT9Q9UHD8 586 aaPredicted RBP20.06■□□□□ 0.8
CCDC43-201ENST00000315286 PUF60Q9UHX1 559 aaKnown RBP20.06■□□□□ 0.8
CCDC43-201ENST00000315286 FBXL5Q9UKA1 691 aa20.06■□□□□ 0.8
CCDC43-201ENST00000315286 MYO6Q9UM54 1294 aa20.06■□□□□ 0.8
CCDC43-201ENST00000315286 AGTPBP1Q9UPW5 1226 aa20.06■□□□□ 0.8
CCDC43-201ENST00000315286 ATP1A1P05023 1023 aaKnown RBP20.05■□□□□ 0.8
CCDC43-201ENST00000315286 SUPT20HL2P0C7V6 817 aa20.05■□□□□ 0.8
CCDC43-201ENST00000315286 PPIL2Q13356 520 aa20.05■□□□□ 0.8
CCDC43-201ENST00000315286 TMEM161BQ8NDZ6 487 aa20.05■□□□□ 0.8
CCDC43-201ENST00000315286 ZNF526Q8TF50 670 aaPredicted RBP20.05■□□□□ 0.8
CCDC43-201ENST00000315286 PDLIM7Q9NR12 457 aa20.05■□□□□ 0.8
CCDC43-201ENST00000315286 PJA2O43164 708 aa20.04■□□□□ 0.8
CCDC43-201ENST00000315286 SMTNP53814 917 aa20.04■□□□□ 0.8
CCDC43-201ENST00000315286 DMP1Q13316 513 aaPredicted RBP20.04■□□□□ 0.8
CCDC43-201ENST00000315286 MOGSQ13724 837 aa20.04■□□□□ 0.8
CCDC43-201ENST00000315286 CEP112Q8N8E3 955 aa20.04■□□□□ 0.8
CCDC43-201ENST00000315286 SLC17A8Q8NDX2 589 aa20.04■□□□□ 0.8
CCDC43-201ENST00000315286 ZSWIM2Q8NEG5 633 aa20.04■□□□□ 0.8
CCDC43-201ENST00000315286 KIFAP3Q92845 792 aa20.04■□□□□ 0.8
CCDC43-201ENST00000315286 OPTNQ96CV9 577 aa20.04■□□□□ 0.8
CCDC43-201ENST00000315286 EPC1Q9H2F5 836 aa20.04■□□□□ 0.8
CCDC43-201ENST00000315286 MLXIPQ9HAP2 919 aa20.04■□□□□ 0.8
CCDC43-201ENST00000315286 CYP26B1Q9NR63 512 aa20.04■□□□□ 0.8
CCDC43-201ENST00000315286 EDNRBP24530 442 aa20.04■□□□□ 0.8
CCDC43-201ENST00000315286 JAM2P57087 298 aa20.04■□□□□ 0.8
CCDC43-201ENST00000315286 SLC18A3Q16572 532 aa20.04■□□□□ 0.8
CCDC43-201ENST00000315286 EAPPQ56P03 285 aaPredicted RBP20.04■□□□□ 0.8
CCDC43-201ENST00000315286 TEX35Q5T0J7 233 aa20.04■□□□□ 0.8
CCDC43-201ENST00000315286 IQCEQ6IPM2 695 aa20.04■□□□□ 0.8
CCDC43-201ENST00000315286 TRAPPC11Q7Z392 1133 aa20.04■□□□□ 0.8
CCDC43-201ENST00000315286 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.04■□□□□ 0.8
CCDC43-201ENST00000315286 TXNRD2Q9NNW7 524 aa20.04■□□□□ 0.8
CCDC43-201ENST00000315286 HSPBP1Q9NZL4 362 aa20.04■□□□□ 0.8
CCDC43-201ENST00000315286 TBX20Q9UMR3 447 aa20.04■□□□□ 0.8
CCDC43-201ENST00000315286 SYNGAP1Q96PV0 1343 aa20.03■□□□□ 0.8
CCDC43-201ENST00000315286 IGSF9BQ9UPX0 1349 aa20.03■□□□□ 0.8
CCDC43-201ENST00000315286 A0A087X0T9 212 aa20.03■□□□□ 0.8
CCDC43-201ENST00000315286 DGAT1O75907 488 aa20.03■□□□□ 0.8
CCDC43-201ENST00000315286 ATG7O95352 703 aa20.03■□□□□ 0.8
CCDC43-201ENST00000315286 FAM228BP0C875 321 aa20.03■□□□□ 0.8
CCDC43-201ENST00000315286 H2AFXP16104 143 aaPredicted RBP20.03■□□□□ 0.8
CCDC43-201ENST00000315286 ATP4AP20648 1035 aa20.03■□□□□ 0.8
CCDC43-201ENST00000315286 CHMP4BP1P59074 171 aa20.03■□□□□ 0.8
CCDC43-201ENST00000315286 DLG4P78352 724 aa20.03■□□□□ 0.8
CCDC43-201ENST00000315286 PTK2Q05397 1052 aa20.03■□□□□ 0.8
CCDC43-201ENST00000315286 PAPD7Q5XG87 772 aaKnown RBP20.03■□□□□ 0.8
CCDC43-201ENST00000315286 ANKRD13CQ8N6S4 541 aa20.03■□□□□ 0.8
CCDC43-201ENST00000315286 XXYLT1Q8NBI6 393 aa20.03■□□□□ 0.8
CCDC43-201ENST00000315286 ARID3AQ99856 593 aa20.03■□□□□ 0.8
CCDC43-201ENST00000315286 NTPCRQ9BSD7 190 aaKnown RBP20.03■□□□□ 0.8
CCDC43-201ENST00000315286 KMT5AQ9NQR1 393 aa20.03■□□□□ 0.8
CCDC43-201ENST00000315286 XPNPEP1Q9NQW7 623 aa20.03■□□□□ 0.8
CCDC43-201ENST00000315286 RBPJLQ9UBG7 517 aa20.03■□□□□ 0.8
CCDC43-201ENST00000315286 ADAMTS1Q9UHI8 967 aa20.03■□□□□ 0.8
CCDC43-201ENST00000315286 SALL4Q9UJQ4 1053 aa20.03■□□□□ 0.8
CCDC43-201ENST00000315286 CAPN6Q9Y6Q1 641 aa20.03■□□□□ 0.8
CCDC43-201ENST00000315286 MOCS3O95396 460 aa20.03■□□□□ 0.8
CCDC43-201ENST00000315286 KRT13P13646 458 aa20.03■□□□□ 0.8
CCDC43-201ENST00000315286 SNRPFP62306 86 aaKnown RBP20.03■□□□□ 0.8
CCDC43-201ENST00000315286 WHAMMP3Q1A5X7 153 aa20.03■□□□□ 0.8
CCDC43-201ENST00000315286 Q3C1V9 767 aa20.03■□□□□ 0.8
CCDC43-201ENST00000315286 XKR3Q5GH77 459 aa20.03■□□□□ 0.8
CCDC43-201ENST00000315286 INTS8Q75QN2 995 aaKnown RBP20.03■□□□□ 0.8
CCDC43-201ENST00000315286 SPIRE2Q8WWL2 714 aa20.03■□□□□ 0.8
CCDC43-201ENST00000315286 GOLGA1Q92805 767 aa20.03■□□□□ 0.8
CCDC43-201ENST00000315286 C17orf75Q9HAS0 396 aa20.03■□□□□ 0.8
CCDC43-201ENST00000315286 DENND3A2RUS2 1198 aa20.02■□□□□ 0.8
CCDC43-201ENST00000315286 ANKRD63C9JTQ0 380 aa20.02■□□□□ 0.8
CCDC43-201ENST00000315286 UBA1P22314 1058 aaKnown RBP20.02■□□□□ 0.8
CCDC43-201ENST00000315286 MTERF2Q49AM1 385 aa20.02■□□□□ 0.8
CCDC43-201ENST00000315286 ZNF571Q7Z3V5 609 aaPredicted RBP20.02■□□□□ 0.8
CCDC43-201ENST00000315286 MCPH1Q8NEM0 835 aa20.02■□□□□ 0.8
CCDC43-201ENST00000315286 ZNF302Q9NR11 478 aa20.02■□□□□ 0.8
CCDC43-201ENST00000315286 MAFBQ9Y5Q3 323 aaPredicted RBP20.02■□□□□ 0.8
CCDC43-201ENST00000315286 GLTPD2A6NH11 291 aa20.01■□□□□ 0.79
CCDC43-201ENST00000315286 ADSSP30520 456 aa20.01■□□□□ 0.79
CCDC43-201ENST00000315286 VAMP7P51809 220 aa20.01■□□□□ 0.79
CCDC43-201ENST00000315286 MYL7Q01449 175 aa20.01■□□□□ 0.79
CCDC43-201ENST00000315286 ARMC9Q7Z3E5 817 aa20.01■□□□□ 0.79
CCDC43-201ENST00000315286 MAP4K3Q8IVH8 894 aa20.01■□□□□ 0.79
CCDC43-201ENST00000315286 TRIM58Q8NG06 486 aa20.01■□□□□ 0.79
CCDC43-201ENST00000315286 TAF1DQ9H5J8 278 aaPredicted RBP20.01■□□□□ 0.79
CCDC43-201ENST00000315286 EXOC7Q9UPT5 735 aa20.01■□□□□ 0.79
CCDC43-201ENST00000315286 SAR1BQ9Y6B6 198 aa20.01■□□□□ 0.79
CCDC43-201ENST00000315286 BZW2Q9Y6E2 419 aaKnown RBP20.01■□□□□ 0.79
CCDC43-201ENST00000315286 SRGAP2O75044 1071 aa20.01■□□□□ 0.79
CCDC43-201ENST00000315286 TACC1O75410 805 aa20.01■□□□□ 0.79
CCDC43-201ENST00000315286 SLC25A27O95847 323 aa20.01■□□□□ 0.79
CCDC43-201ENST00000315286 PNMA6AP0CW24 399 aaPredicted RBP20.01■□□□□ 0.79
CCDC43-201ENST00000315286 CNGA1P29973 690 aa20.01■□□□□ 0.79
CCDC43-201ENST00000315286 PRKCIP41743 596 aa20.01■□□□□ 0.79
CCDC43-201ENST00000315286 GPAT2Q6NUI2 795 aa20.01■□□□□ 0.79
CCDC43-201ENST00000315286 EEPD1Q7L9B9 569 aa20.01■□□□□ 0.79
CCDC43-201ENST00000315286 RABGGTAQ92696 567 aa20.01■□□□□ 0.79
CCDC43-201ENST00000315286 HVCN1Q96D96 273 aa20.01■□□□□ 0.79
CCDC43-201ENST00000315286 INTS2Q9H0H0 1204 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms