RNA–Protein interactions for RNA: ENST00000314358.9

KDM3B-201, Transcript of lysine demethylase 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3B, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-201ENST00000314358 TMEM270Q6UE05 265 aa22.33■■□□□ 1.17
KDM3B-201ENST00000314358 EXOC8Q8IYI6 725 aa22.33■■□□□ 1.17
KDM3B-201ENST00000314358 RBM46Q8TBY0 533 aaKnown RBP22.33■■□□□ 1.17
KDM3B-201ENST00000314358 PAPOLAP51003 745 aaKnown RBP22.33■■□□□ 1.17
KDM3B-201ENST00000314358 CATSPER4Q7RTX7 472 aa22.33■■□□□ 1.17
KDM3B-201ENST00000314358 NLGN1Q8N2Q7 840 aa22.33■■□□□ 1.17
KDM3B-201ENST00000314358 AATKQ6ZMQ8 1374 aa22.33■■□□□ 1.17
KDM3B-201ENST00000314358 LRRC8EQ6NSJ5 796 aa22.33■■□□□ 1.16
KDM3B-201ENST00000314358 ZNF341Q9BYN7 854 aa22.33■■□□□ 1.16
KDM3B-201ENST00000314358 NDFIP2Q9NV92 336 aa22.33■■□□□ 1.16
KDM3B-201ENST00000314358 SEMA3EO15041 775 aa22.32■■□□□ 1.16
KDM3B-201ENST00000314358 ARL4CP56559 192 aa22.32■■□□□ 1.16
KDM3B-201ENST00000314358 EFTUD2Q15029 972 aaKnown RBP eCLIP22.32■■□□□ 1.169e-9■■□□□ 14.5
KDM3B-201ENST00000314358 OSBP2Q969R2 916 aa22.32■■□□□ 1.16
KDM3B-201ENST00000314358 POTEMA6NI47 508 aa22.32■■□□□ 1.16
KDM3B-201ENST00000314358 PNMA6AP0CW24 399 aaPredicted RBP22.32■■□□□ 1.16
KDM3B-201ENST00000314358 FAM213AQ9BRX8 229 aa22.32■■□□□ 1.16
KDM3B-201ENST00000314358 KRT37O76014 449 aa22.32■■□□□ 1.16
KDM3B-201ENST00000314358 PALMDQ9NP74 551 aa22.32■■□□□ 1.16
KDM3B-201ENST00000314358 WBP4O75554 376 aaKnown RBP22.32■■□□□ 1.16
KDM3B-201ENST00000314358 VCAM1P19320 739 aa22.32■■□□□ 1.16
KDM3B-201ENST00000314358 FAM180AQ6UWF9 173 aa22.32■■□□□ 1.16
KDM3B-201ENST00000314358 SERPINB13Q9UIV8 391 aa22.32■■□□□ 1.16
KDM3B-201ENST00000314358 SAMD9LQ8IVG5 1584 aa22.32■■□□□ 1.16
KDM3B-201ENST00000314358 C11orf70Q9BRQ4 267 aa22.32■■□□□ 1.16
KDM3B-201ENST00000314358 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.32■■□□□ 1.162e-6■■□□□ 14.1
KDM3B-201ENST00000314358 HDAC6Q9UBN7 1215 aa22.32■■□□□ 1.16
KDM3B-201ENST00000314358 RANBP1P43487 201 aa22.31■■□□□ 1.16
KDM3B-201ENST00000314358 NFRKBQ6P4R8 1299 aa22.31■■□□□ 1.16
KDM3B-201ENST00000314358 PJA2O43164 708 aa22.31■■□□□ 1.16
KDM3B-201ENST00000314358 SF3B3Q15393 1217 aaKnown RBP22.31■■□□□ 1.16
KDM3B-201ENST00000314358 DDX28Q9NUL7 540 aaKnown RBP22.31■■□□□ 1.16
KDM3B-201ENST00000314358 TAS2R42Q7RTR8 314 aa22.31■■□□□ 1.16
KDM3B-201ENST00000314358 MID2Q9UJV3 735 aa22.31■■□□□ 1.16
KDM3B-201ENST00000314358 CDV3Q9UKY7 258 aaKnown RBP22.31■■□□□ 1.16
KDM3B-201ENST00000314358 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.31■■□□□ 1.16
KDM3B-201ENST00000314358 ABCA8O94911 1581 aa22.31■■□□□ 1.16
KDM3B-201ENST00000314358 USP14P54578 494 aa22.31■■□□□ 1.16
KDM3B-201ENST00000314358 OSBPL1AQ9BXW6 950 aa22.31■■□□□ 1.16
KDM3B-201ENST00000314358 IFNA8P32881 189 aa22.31■■□□□ 1.16
KDM3B-201ENST00000314358 TMEM60Q9H2L4 133 aa22.31■■□□□ 1.16
KDM3B-201ENST00000314358 CCDC78A2IDD5 438 aa22.31■■□□□ 1.16
KDM3B-201ENST00000314358 CTIFO43310 598 aaKnown RBP22.31■■□□□ 1.16
KDM3B-201ENST00000314358 ZNF667Q5HYK9 610 aa22.31■■□□□ 1.16
KDM3B-201ENST00000314358 KIFC3Q9BVG8 833 aa22.31■■□□□ 1.16
KDM3B-201ENST00000314358 AARSP49588 968 aaKnown RBP eCLIP22.3■■□□□ 1.16
KDM3B-201ENST00000314358 CYTH1Q15438 398 aa22.3■■□□□ 1.16
KDM3B-201ENST00000314358 SH3KBP1Q96B97 665 aa22.3■■□□□ 1.16
KDM3B-201ENST00000314358 CHCHD3Q9NX63 227 aaKnown RBP22.3■■□□□ 1.16
KDM3B-201ENST00000314358 AURKCQ9UQB9 309 aa22.3■■□□□ 1.16
KDM3B-201ENST00000314358 SRPRBQ9Y5M8 271 aaKnown RBP22.3■■□□□ 1.16
KDM3B-201ENST00000314358 ATP7BP35670 1465 aa22.3■■□□□ 1.16
KDM3B-201ENST00000314358 MBD5Q9P267 1494 aa22.3■■□□□ 1.16
KDM3B-201ENST00000314358 PYGBP11216 843 aa22.3■■□□□ 1.16
KDM3B-201ENST00000314358 ADORA2BP29275 332 aa22.3■■□□□ 1.16
KDM3B-201ENST00000314358 PCYT1AP49585 367 aa22.3■■□□□ 1.16
KDM3B-201ENST00000314358 BTN2A2Q8WVV5 523 aa22.3■■□□□ 1.16
KDM3B-201ENST00000314358 KLHL11Q9NVR0 708 aa22.3■■□□□ 1.16
KDM3B-201ENST00000314358 WDR17Q8IZU2 1322 aa22.3■■□□□ 1.16
KDM3B-201ENST00000314358 CCDC17Q96LX7 622 aa22.3■■□□□ 1.16
KDM3B-201ENST00000314358 TGS1Q96RS0 853 aaKnown RBP22.3■■□□□ 1.16
KDM3B-201ENST00000314358 KANSL2Q9H9L4 492 aa22.3■■□□□ 1.16
KDM3B-201ENST00000314358 TARBP1Q13395 1621 aaKnown RBP22.3■■□□□ 1.16
KDM3B-201ENST00000314358 CCDC151A5D8V7 595 aa22.3■■□□□ 1.16
KDM3B-201ENST00000314358 MFAP3LO75121 409 aa22.3■■□□□ 1.16
KDM3B-201ENST00000314358 RECQLP46063 649 aaPredicted RBP22.3■■□□□ 1.16
KDM3B-201ENST00000314358 EIF3BP55884 814 aaKnown RBP22.3■■□□□ 1.16
KDM3B-201ENST00000314358 TJAP1Q5JTD0 557 aa22.3■■□□□ 1.16
KDM3B-201ENST00000314358 KIAA1755Q5JYT7 1200 aa22.3■■□□□ 1.16
KDM3B-201ENST00000314358 ARHGEF25Q86VW2 580 aa22.3■■□□□ 1.16
KDM3B-201ENST00000314358 EXOC4Q96A65 974 aa22.3■■□□□ 1.16
KDM3B-201ENST00000314358 SMAD5Q99717 465 aaKnown RBP22.3■■□□□ 1.16
KDM3B-201ENST00000314358 FAM196BA6NMK8 535 aa22.3■■□□□ 1.16
KDM3B-201ENST00000314358 GOLGA8RI6L899 631 aa22.3■■□□□ 1.16
KDM3B-201ENST00000314358 SLC16A4O15374 487 aa22.3■■□□□ 1.16
KDM3B-201ENST00000314358 ATP8B1O43520 1251 aa22.3■■□□□ 1.16
KDM3B-201ENST00000314358 PPARGP37231 505 aaPredicted RBP22.3■■□□□ 1.16
KDM3B-201ENST00000314358 GPS1Q13098 491 aa22.3■■□□□ 1.16
KDM3B-201ENST00000314358 LRRC36Q1X8D7 754 aa22.3■■□□□ 1.16
KDM3B-201ENST00000314358 FSCBQ5H9T9 825 aa22.3■■□□□ 1.16
KDM3B-201ENST00000314358 ABCB11O95342 1321 aa22.3■■□□□ 1.16
KDM3B-201ENST00000314358 E2F8A0AVK6 867 aa22.29■■□□□ 1.16
KDM3B-201ENST00000314358 LRRC53A6NM62 1247 aa22.29■■□□□ 1.16
KDM3B-201ENST00000314358 COBLL1Q53SF7 1204 aa22.29■■□□□ 1.16
KDM3B-201ENST00000314358 ARMC9Q7Z3E5 817 aa22.29■■□□□ 1.16
KDM3B-201ENST00000314358 ABHD8Q96I13 439 aa22.29■■□□□ 1.16
KDM3B-201ENST00000314358 NUP85Q9BW27 656 aa22.29■■□□□ 1.16
KDM3B-201ENST00000314358 SIK2Q9H0K1 926 aa22.29■■□□□ 1.16
KDM3B-201ENST00000314358 ARHGAP26Q9UNA1 814 aa22.29■■□□□ 1.16
KDM3B-201ENST00000314358 LMNAP02545 664 aaKnown RBP22.29■■□□□ 1.16
KDM3B-201ENST00000314358 MKRN4PQ13434 485 aaPredicted RBP22.29■■□□□ 1.16
KDM3B-201ENST00000314358 CUL1Q13616 776 aa22.29■■□□□ 1.16
KDM3B-201ENST00000314358 ZNF699Q32M78 642 aa22.29■■□□□ 1.16
KDM3B-201ENST00000314358 PMS2P54278 862 aa22.29■■□□□ 1.16
KDM3B-201ENST00000314358 THEMIS2Q5TEJ8 643 aa22.29■■□□□ 1.16
KDM3B-201ENST00000314358 ZNF229Q9UJW7 825 aa22.29■■□□□ 1.16
KDM3B-201ENST00000314358 M0QYV0 167 aa22.29■■□□□ 1.16
KDM3B-201ENST00000314358 ZBED8Q8IZ13 594 aa22.28■■□□□ 1.16
KDM3B-201ENST00000314358 ZBTB12Q9Y330 459 aaPredicted RBP22.28■■□□□ 1.16
KDM3B-201ENST00000314358 ARHGEF9O43307 516 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms