RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 SELENOSQ9BQE4 189 aa14.76□□□□□ -0.05
DDX54-202ENST00000314045 MROH8Q9H579 483 aa14.76□□□□□ -0.05
DDX54-202ENST00000314045 PXMP2Q9NR77 195 aa14.76□□□□□ -0.05
DDX54-202ENST00000314045 RSPH10B2B2RC85 870 aa14.75□□□□□ -0.05
DDX54-202ENST00000314045 FAM86B1E9PN63 330 aa14.75□□□□□ -0.05
DDX54-202ENST00000314045 PRKCBP05771 671 aa14.75□□□□□ -0.05
DDX54-202ENST00000314045 FAM86B2P0C5J1 330 aa14.75□□□□□ -0.05
DDX54-202ENST00000314045 RSPH10BP0C881 870 aa14.75□□□□□ -0.05
DDX54-202ENST00000314045 FXR1P51114 621 aaKnown RBP eCLIP14.75□□□□□ -0.05
DDX54-202ENST00000314045 FUT2Q10981 343 aa14.75□□□□□ -0.05
DDX54-202ENST00000314045 MXD4Q14582 209 aaPredicted RBP14.75□□□□□ -0.05
DDX54-202ENST00000314045 PCNX4Q63HM2 1172 aa14.75□□□□□ -0.05
DDX54-202ENST00000314045 RABGGTAQ92696 567 aa14.75□□□□□ -0.05
DDX54-202ENST00000314045 HEXIM2Q96MH2 286 aaKnown RBP14.75□□□□□ -0.05
DDX54-202ENST00000314045 TSNARE1Q96NA8 513 aa14.75□□□□□ -0.05
DDX54-202ENST00000314045 BFSP1Q12934 665 aa14.75□□□□□ -0.05
DDX54-202ENST00000314045 ZNF699Q32M78 642 aa14.75□□□□□ -0.05
DDX54-202ENST00000314045 TMEM270Q6UE05 265 aa14.75□□□□□ -0.05
DDX54-202ENST00000314045 OTUD6BQ8N6M0 293 aa14.75□□□□□ -0.05
DDX54-202ENST00000314045 PPP1R14CQ8TAE6 165 aa14.75□□□□□ -0.05
DDX54-202ENST00000314045 STK10O94804 968 aaKnown RBP14.75□□□□□ -0.05
DDX54-202ENST00000314045 C6orf222P0C671 652 aaPredicted RBP14.75□□□□□ -0.05
DDX54-202ENST00000314045 GCLCP48506 637 aaPredicted RBP14.75□□□□□ -0.05
DDX54-202ENST00000314045 GPC3P51654 580 aa14.75□□□□□ -0.05
DDX54-202ENST00000314045 GFPT1Q06210 699 aaPredicted RBP14.75□□□□□ -0.05
DDX54-202ENST00000314045 MTF1Q14872 753 aa14.75□□□□□ -0.05
DDX54-202ENST00000314045 LMBRD2Q68DH5 695 aaPredicted RBP14.75□□□□□ -0.05
DDX54-202ENST00000314045 CCDC89Q8N998 374 aa14.75□□□□□ -0.05
DDX54-202ENST00000314045 TRPM4Q8TD43 1214 aa14.75□□□□□ -0.05
DDX54-202ENST00000314045 P2RX7Q99572 595 aaKnown RBP14.75□□□□□ -0.05
DDX54-202ENST00000314045 COMMD10Q9Y6G5 202 aa14.75□□□□□ -0.05
DDX54-202ENST00000314045 SLC16A3O15427 465 aaKnown RBP14.74□□□□□ -0.05
DDX54-202ENST00000314045 ACOT2P49753 483 aa14.74□□□□□ -0.05
DDX54-202ENST00000314045 MAGOHBQ96A72 148 aaKnown RBP14.74□□□□□ -0.05
DDX54-202ENST00000314045 OGFRQ9NZT2 677 aa14.74□□□□□ -0.05
DDX54-202ENST00000314045 KAZNQ674X7 775 aa14.74□□□□□ -0.05
DDX54-202ENST00000314045 CEP128Q6ZU80 1094 aa14.74□□□□□ -0.05
DDX54-202ENST00000314045 CDCA5Q96FF9 252 aa14.74□□□□□ -0.05
DDX54-202ENST00000314045 DPH5Q9H2P9 285 aa14.74□□□□□ -0.05
DDX54-202ENST00000314045 MAGEB2O15479 319 aa14.74□□□□□ -0.05
DDX54-202ENST00000314045 ABL1P00519 1130 aa14.74□□□□□ -0.05
DDX54-202ENST00000314045 CIITAP33076 1130 aa14.74□□□□□ -0.05
DDX54-202ENST00000314045 DUOXA2Q1HG44 320 aa14.74□□□□□ -0.05
DDX54-202ENST00000314045 OR6B3Q8NGW1 331 aa14.74□□□□□ -0.05
DDX54-202ENST00000314045 CHP1Q99653 195 aa14.74□□□□□ -0.05
DDX54-202ENST00000314045 ERAP1Q9NZ08 941 aa14.74□□□□□ -0.05
DDX54-202ENST00000314045 LRFN2Q9ULH4 789 aa14.74□□□□□ -0.05
DDX54-202ENST00000314045 FAM169AQ9Y6X4 670 aa14.74□□□□□ -0.05
DDX54-202ENST00000314045 GOLGA6BA6NDN3 693 aa14.73□□□□□ -0.05
DDX54-202ENST00000314045 TCF7P36402 384 aaPredicted RBP14.73□□□□□ -0.05
DDX54-202ENST00000314045 RFC5P40937 340 aa14.73□□□□□ -0.05
DDX54-202ENST00000314045 GUCY2FP51841 1108 aa14.73□□□□□ -0.05
DDX54-202ENST00000314045 VGLL4Q14135 290 aa14.73□□□□□ -0.05
DDX54-202ENST00000314045 SHROOM1Q2M3G4 852 aaPredicted RBP14.73□□□□□ -0.05
DDX54-202ENST00000314045 PDXDC1Q6P996 788 aa14.73□□□□□ -0.05
DDX54-202ENST00000314045 USP50Q70EL3 339 aaPredicted RBP14.73□□□□□ -0.05
DDX54-202ENST00000314045 LRRC71Q8N4P6 559 aa14.73□□□□□ -0.05
DDX54-202ENST00000314045 KRT12Q99456 494 aa14.73□□□□□ -0.05
DDX54-202ENST00000314045 NUDT12Q9BQG2 462 aa14.73□□□□□ -0.05
DDX54-202ENST00000314045 AGPAT5Q9NUQ2 364 aa14.73□□□□□ -0.05
DDX54-202ENST00000314045 SYNJ2BP-COX16A0A087WUM0 186 aa14.73□□□□□ -0.05
DDX54-202ENST00000314045 USP27XA6NNY8 438 aa14.73□□□□□ -0.05
DDX54-202ENST00000314045 EIF3DO15371 548 aaKnown RBP eCLIP14.73□□□□□ -0.05
DDX54-202ENST00000314045 LAMC2Q13753 1193 aa14.73□□□□□ -0.05
DDX54-202ENST00000314045 RNF187Q5TA31 235 aaPredicted RBP14.73□□□□□ -0.05
DDX54-202ENST00000314045 METTL23Q86XA0 190 aa14.73□□□□□ -0.05
DDX54-202ENST00000314045 KCNK9Q9NPC2 374 aa14.73□□□□□ -0.05
DDX54-202ENST00000314045 COX16Q9P0S2 106 aa14.73□□□□□ -0.05
DDX54-202ENST00000314045 ALS2Q96Q42 1657 aa14.73□□□□□ -0.05
DDX54-202ENST00000314045 KLRG2A4D1S0 409 aaPredicted RBP14.73□□□□□ -0.05
DDX54-202ENST00000314045 HBP1O60381 514 aa14.73□□□□□ -0.05
DDX54-202ENST00000314045 OATP04181 439 aa14.73□□□□□ -0.05
DDX54-202ENST00000314045 CAPN2P17655 700 aa14.73□□□□□ -0.05
DDX54-202ENST00000314045 OR6B2Q6IFH4 312 aa14.73□□□□□ -0.05
DDX54-202ENST00000314045 RHOT2Q8IXI1 618 aa14.73□□□□□ -0.05
DDX54-202ENST00000314045 FAM76AQ8TAV0 307 aa14.73□□□□□ -0.05
DDX54-202ENST00000314045 ADAM22Q9P0K1 906 aa14.73□□□□□ -0.05
DDX54-202ENST00000314045 ZNF148Q9UQR1 794 aa14.73□□□□□ -0.05
DDX54-202ENST00000314045 PGRMC1O00264 195 aaKnown RBP14.73□□□□□ -0.05
DDX54-202ENST00000314045 FMO5P49326 533 aa14.73□□□□□ -0.05
DDX54-202ENST00000314045 GUCY2DQ02846 1103 aa14.73□□□□□ -0.05
DDX54-202ENST00000314045 SNRNP35Q16560 246 aaKnown RBP14.73□□□□□ -0.05
DDX54-202ENST00000314045 ERICH1Q86X53 443 aa14.73□□□□□ -0.05
DDX54-202ENST00000314045 RSAD2Q8WXG1 361 aa14.73□□□□□ -0.05
DDX54-202ENST00000314045 MRRFQ96E11 262 aaKnown RBP14.73□□□□□ -0.05
DDX54-202ENST00000314045 SLC38A10Q9HBR0 1119 aa14.73□□□□□ -0.05
DDX54-202ENST00000314045 GPRC5CQ9NQ84 441 aa14.73□□□□□ -0.05
DDX54-202ENST00000314045 KIAA0391O15091 583 aaKnown RBP14.72□□□□□ -0.05
DDX54-202ENST00000314045 MUTP22033 750 aa14.72□□□□□ -0.05
DDX54-202ENST00000314045 PSMC6P62333 389 aa14.72□□□□□ -0.05
DDX54-202ENST00000314045 PPATQ06203 517 aa14.72□□□□□ -0.05
DDX54-202ENST00000314045 GIT2Q14161 759 aa14.72□□□□□ -0.05
DDX54-202ENST00000314045 TMEM35BQ8NCS4 154 aa14.72□□□□□ -0.05
DDX54-202ENST00000314045 RANBP17Q9H2T7 1088 aaKnown RBP14.72□□□□□ -0.05
DDX54-202ENST00000314045 EIF3CLB5ME19 914 aaKnown RBP14.72□□□□□ -0.05
DDX54-202ENST00000314045 PGM5Q15124 567 aa14.72□□□□□ -0.05
DDX54-202ENST00000314045 UAP1Q16222 522 aaPredicted RBP14.72□□□□□ -0.05
DDX54-202ENST00000314045 MICALCLQ6ZW33 695 aa14.72□□□□□ -0.05
DDX54-202ENST00000314045 GLYCTKQ8IVS8 523 aa14.72□□□□□ -0.05
DDX54-202ENST00000314045 MAP7D3Q8IWC1 876 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms