RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 NLRP11P59045 1033 aaKnown RBP13.99□□□□□ -0.17
CHMP2A-201ENST00000312547 BFSP2Q13515 415 aa13.99□□□□□ -0.17
CHMP2A-201ENST00000312547 KLHL40Q2TBA0 621 aa13.99□□□□□ -0.17
CHMP2A-201ENST00000312547 ZNF410Q86VK4 478 aa13.99□□□□□ -0.17
CHMP2A-201ENST00000312547 IFNLR1Q8IU57 520 aaPredicted RBP13.99□□□□□ -0.17
CHMP2A-201ENST00000312547 RHPN2Q8IUC4 686 aa13.99□□□□□ -0.17
CHMP2A-201ENST00000312547 CCDC65Q8IXS2 484 aa13.99□□□□□ -0.17
CHMP2A-201ENST00000312547 CCDC155Q8N6L0 562 aa13.99□□□□□ -0.17
CHMP2A-201ENST00000312547 HTATIP2Q9BUP3 242 aa13.99□□□□□ -0.17
CHMP2A-201ENST00000312547 NFKBIZQ9BYH8 718 aa13.99□□□□□ -0.17
CHMP2A-201ENST00000312547 NUP62CLQ9H1M0 184 aa13.99□□□□□ -0.17
CHMP2A-201ENST00000312547 OLFML3Q9NRN5 406 aa13.99□□□□□ -0.17
CHMP2A-201ENST00000312547 PANK4Q9NVE7 773 aa13.99□□□□□ -0.17
CHMP2A-201ENST00000312547 LARSQ9P2J5 1176 aaKnown RBP13.99□□□□□ -0.17
CHMP2A-201ENST00000312547 SEL1LQ9UBV2 794 aa13.99□□□□□ -0.17
CHMP2A-201ENST00000312547 PCDHA5Q9Y5H7 936 aa13.99□□□□□ -0.17
CHMP2A-201ENST00000312547 TRIM43BA6NCK2 446 aa13.98□□□□□ -0.17
CHMP2A-201ENST00000312547 MAPTP10636 758 aaKnown RBP13.98□□□□□ -0.17
CHMP2A-201ENST00000312547 IDEP14735 1019 aa13.98□□□□□ -0.17
CHMP2A-201ENST00000312547 PEX3P56589 373 aa13.98□□□□□ -0.17
CHMP2A-201ENST00000312547 PTENP60484 403 aa13.98□□□□□ -0.17
CHMP2A-201ENST00000312547 TMEM62Q0P6H9 643 aa13.98□□□□□ -0.17
CHMP2A-201ENST00000312547 COASYQ13057 564 aa13.98□□□□□ -0.17
CHMP2A-201ENST00000312547 DMP1Q13316 513 aaPredicted RBP13.98□□□□□ -0.17
CHMP2A-201ENST00000312547 KCNB1Q14721 858 aa13.98□□□□□ -0.17
CHMP2A-201ENST00000312547 PPP2R5AQ15172 486 aa13.98□□□□□ -0.17
CHMP2A-201ENST00000312547 CAMK4Q16566 473 aa13.98□□□□□ -0.17
CHMP2A-201ENST00000312547 KIZQ2M2Z5 673 aa13.98□□□□□ -0.17
CHMP2A-201ENST00000312547 ODR4Q5SWX8 454 aa13.98□□□□□ -0.17
CHMP2A-201ENST00000312547 ZNF618Q5T7W0 954 aa13.98□□□□□ -0.17
CHMP2A-201ENST00000312547 NT5DC1Q5TFE4 455 aa13.98□□□□□ -0.17
CHMP2A-201ENST00000312547 CDCA2Q69YH5 1023 aaPredicted RBP13.98□□□□□ -0.17
CHMP2A-201ENST00000312547 RBM43Q6ZSC3 357 aaKnown RBP13.98□□□□□ -0.17
CHMP2A-201ENST00000312547 SFR1Q86XK3 245 aa13.98□□□□□ -0.17
CHMP2A-201ENST00000312547 RNF149Q8NC42 400 aa13.98□□□□□ -0.17
CHMP2A-201ENST00000312547 ERCC4Q92889 916 aaPredicted RBP13.98□□□□□ -0.17
CHMP2A-201ENST00000312547 TRIM43Q96BQ3 446 aaPredicted RBP13.98□□□□□ -0.17
CHMP2A-201ENST00000312547 IFT74Q96LB3 600 aa13.98□□□□□ -0.17
CHMP2A-201ENST00000312547 NLRP4Q96MN2 994 aa13.98□□□□□ -0.17
CHMP2A-201ENST00000312547 CELF4Q9BZC1 486 aaKnown RBP13.98□□□□□ -0.17
CHMP2A-201ENST00000312547 HIPK3Q9H422 1215 aa13.98□□□□□ -0.17
CHMP2A-201ENST00000312547 CDHR5Q9HBB8 845 aa13.98□□□□□ -0.17
CHMP2A-201ENST00000312547 IFT122Q9HBG6 1241 aa13.98□□□□□ -0.17
CHMP2A-201ENST00000312547 TMEM39AQ9NV64 488 aa13.98□□□□□ -0.17
CHMP2A-201ENST00000312547 KCNG1Q9UIX4 513 aa13.98□□□□□ -0.17
CHMP2A-201ENST00000312547 TRPV2Q9Y5S1 764 aa13.98□□□□□ -0.17
CHMP2A-201ENST00000312547 CDY2AQ9Y6F7 541 aa13.98□□□□□ -0.17
CHMP2A-201ENST00000312547 TRIOBPQ9H2D6 2365 aa13.98□□□□□ -0.17
CHMP2A-201ENST00000312547 UMODL1Q5DID0 1318 aa13.97□□□□□ -0.17
CHMP2A-201ENST00000312547 ADGRA3Q8IWK6 1321 aa13.97□□□□□ -0.17
CHMP2A-201ENST00000312547 A0A087WZ62 844 aa13.97□□□□□ -0.17
CHMP2A-201ENST00000312547 TRAK2O60296 914 aa13.97□□□□□ -0.17
CHMP2A-201ENST00000312547 RHOBTB3O94955 611 aa13.97□□□□□ -0.17
CHMP2A-201ENST00000312547 SMC2O95347 1197 aa13.97□□□□□ -0.17
CHMP2A-201ENST00000312547 CTSHP09668 335 aa13.97□□□□□ -0.17
CHMP2A-201ENST00000312547 SRGAP2CP0DJJ0 459 aa13.97□□□□□ -0.17
CHMP2A-201ENST00000312547 SELPP16109 830 aa13.97□□□□□ -0.17
CHMP2A-201ENST00000312547 CRYBB1P53674 252 aaPredicted RBP13.97□□□□□ -0.17
CHMP2A-201ENST00000312547 NCKAP1LP55160 1127 aa13.97□□□□□ -0.17
CHMP2A-201ENST00000312547 TFDP1Q14186 410 aa13.97□□□□□ -0.17
CHMP2A-201ENST00000312547 MBTPS1Q14703 1052 aa13.97□□□□□ -0.17
CHMP2A-201ENST00000312547 SKOR2Q2VWA4 1001 aaPredicted RBP13.97□□□□□ -0.17
CHMP2A-201ENST00000312547 KMT5BQ4FZB7 885 aa13.97□□□□□ -0.17
CHMP2A-201ENST00000312547 HERC4Q5GLZ8 1057 aaPredicted RBP13.97□□□□□ -0.17
CHMP2A-201ENST00000312547 LRRC8DQ7L1W4 858 aa13.97□□□□□ -0.17
CHMP2A-201ENST00000312547 MYCT1Q8N699 235 aa13.97□□□□□ -0.17
CHMP2A-201ENST00000312547 TMEM161BQ8NDZ6 487 aa13.97□□□□□ -0.17
CHMP2A-201ENST00000312547 ZNF668Q96K58 619 aaPredicted RBP13.97□□□□□ -0.17
CHMP2A-201ENST00000312547 GSDMAQ96QA5 445 aa13.97□□□□□ -0.17
CHMP2A-201ENST00000312547 FDXACB1Q9BRP7 624 aaPredicted RBP13.97□□□□□ -0.17
CHMP2A-201ENST00000312547 STRA6Q9BX79 667 aa13.97□□□□□ -0.17
CHMP2A-201ENST00000312547 WNT8AQ9H1J5 351 aa13.97□□□□□ -0.17
CHMP2A-201ENST00000312547 ST6GALNAC4Q9H4F1 302 aa13.97□□□□□ -0.17
CHMP2A-201ENST00000312547 ZHX3Q9H4I2 956 aa13.97□□□□□ -0.17
CHMP2A-201ENST00000312547 TMEM63CQ9P1W3 806 aa13.97□□□□□ -0.17
CHMP2A-201ENST00000312547 KIAA1468Q9P260 1216 aa13.97□□□□□ -0.17
CHMP2A-201ENST00000312547 ARHGAP28Q9P2N2 729 aa13.97□□□□□ -0.17
CHMP2A-201ENST00000312547 TRIP12Q14669 1992 aaPredicted RBP13.96□□□□□ -0.17
CHMP2A-201ENST00000312547 M0QZ92 97 aa13.96□□□□□ -0.17
CHMP2A-201ENST00000312547 PPP1R37O75864 691 aa13.96□□□□□ -0.17
CHMP2A-201ENST00000312547 IQCF3P0C7M6 154 aa13.96□□□□□ -0.17
CHMP2A-201ENST00000312547 DARSP14868 501 aaKnown RBP13.96□□□□□ -0.17
CHMP2A-201ENST00000312547 EIF4BP23588 611 aaKnown RBP13.96□□□□□ -0.17
CHMP2A-201ENST00000312547 ITGB8P26012 769 aa13.96□□□□□ -0.17
CHMP2A-201ENST00000312547 PHKA2P46019 1235 aa13.96□□□□□ -0.17
CHMP2A-201ENST00000312547 GPNMBQ14956 572 aa13.96□□□□□ -0.17
CHMP2A-201ENST00000312547 FAM26FQ5R3K3 315 aa13.96□□□□□ -0.17
CHMP2A-201ENST00000312547 CCDC183Q5T5S1 534 aa13.96□□□□□ -0.17
CHMP2A-201ENST00000312547 ZNF720Q7Z2F6 126 aa13.96□□□□□ -0.17
CHMP2A-201ENST00000312547 FAM178BQ8IXR5 827 aa13.96□□□□□ -0.17
CHMP2A-201ENST00000312547 SLC17A8Q8NDX2 589 aa13.96□□□□□ -0.17
CHMP2A-201ENST00000312547 TMEM40Q8WWA1 233 aa13.96□□□□□ -0.17
CHMP2A-201ENST00000312547 NLRP7Q8WX94 980 aa13.96□□□□□ -0.17
CHMP2A-201ENST00000312547 HPS3Q969F9 1004 aa13.96□□□□□ -0.17
CHMP2A-201ENST00000312547 SMARCE1Q969G3 411 aa13.96□□□□□ -0.17
CHMP2A-201ENST00000312547 PPP1R16BQ96T49 567 aa13.96□□□□□ -0.17
CHMP2A-201ENST00000312547 OSMRQ99650 979 aa13.96□□□□□ -0.17
CHMP2A-201ENST00000312547 KIFC3Q9BVG8 833 aa13.96□□□□□ -0.17
CHMP2A-201ENST00000312547 FGFBP2Q9BYJ0 223 aa13.96□□□□□ -0.17
CHMP2A-201ENST00000312547 GCOM2Q9BZD3 368 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms