RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 DNAJC5BQ9UF47 199 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 FBXL5Q9UKA1 691 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 CDY2AQ9Y6F7 541 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 CDY1Q9Y6F8 540 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 GYG2O15488 501 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 PSTPIP1O43586 416 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 ADD1P35611 737 aaKnown RBP9.41□□□□□ -0.9
COL6A5-202ENST00000312481 TMEM35BQ8NCS4 154 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 ICA1LQ8NDH6 482 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 ZNF398Q8TD17 642 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 KCNK16Q96T55 309 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 CNOT7Q9UIV1 285 aaKnown RBP9.41□□□□□ -0.9
COL6A5-202ENST00000312481 TMEM110-MUSTN1A8MSY1 372 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 RTN2O75298 545 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 S100BP04271 92 aaPredicted RBP9.41□□□□□ -0.9
COL6A5-202ENST00000312481 ASNSP08243 561 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 TTKP33981 857 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 PYROXD1Q8WU10 500 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 ISCUQ9H1K1 167 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 H0YIN7 160 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 MEIS1O00470 390 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 HNRNPDLO14979 420 aaKnown RBP9.41□□□□□ -0.9
COL6A5-202ENST00000312481 MAPTP10636 758 aaKnown RBP9.41□□□□□ -0.9
COL6A5-202ENST00000312481 CCND2P30279 289 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 TAF11Q15544 211 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 COL23A1Q86Y22 540 aaPredicted RBP9.41□□□□□ -0.9
COL6A5-202ENST00000312481 ACTRT1Q8TDG2 376 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 ZNF653Q96CK0 615 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 ABCB6Q9NP58 842 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 ACTL7BQ9Y614 415 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 C16orf96A6NNT2 1141 aa9.4□□□□□ -0.9
COL6A5-202ENST00000312481 PLA2G4BP0C869 781 aa9.4□□□□□ -0.9
COL6A5-202ENST00000312481 HSPA1AP0DMV8 641 aaKnown RBP9.4□□□□□ -0.9
COL6A5-202ENST00000312481 HSPA1BP0DMV9 641 aaKnown RBP9.4□□□□□ -0.9
COL6A5-202ENST00000312481 DNAJC7Q99615 494 aa9.4□□□□□ -0.9
COL6A5-202ENST00000312481 SATB2Q9UPW6 733 aa9.4□□□□□ -0.9
COL6A5-202ENST00000312481 A8MXQ7 604 aa9.4□□□□□ -0.9
COL6A5-202ENST00000312481 PSAPP07602 524 aa9.4□□□□□ -0.9
COL6A5-202ENST00000312481 GHRP10912 638 aa9.4□□□□□ -0.9
COL6A5-202ENST00000312481 ADCK5Q3MIX3 580 aa9.4□□□□□ -0.9
COL6A5-202ENST00000312481 COBLL1Q53SF7 1204 aa9.4□□□□□ -0.9
COL6A5-202ENST00000312481 CHST3Q7LGC8 479 aa9.4□□□□□ -0.9
COL6A5-202ENST00000312481 JADE3Q92613 823 aa9.4□□□□□ -0.9
COL6A5-202ENST00000312481 UTP6Q9NYH9 597 aaKnown RBP9.4□□□□□ -0.9
COL6A5-202ENST00000312481 ENOPH1Q9UHY7 261 aa9.4□□□□□ -0.9
COL6A5-202ENST00000312481 PFDN1O60925 122 aa9.4□□□□□ -0.9
COL6A5-202ENST00000312481 MYL4P12829 197 aa9.4□□□□□ -0.9
COL6A5-202ENST00000312481 MDH1P40925 334 aaKnown RBP9.4□□□□□ -0.9
COL6A5-202ENST00000312481 NDUFAF2Q8N183 169 aa9.4□□□□□ -0.9
COL6A5-202ENST00000312481 SYT2Q8N9I0 419 aaPredicted RBP9.4□□□□□ -0.9
COL6A5-202ENST00000312481 ASNSD1Q9NWL6 643 aa9.4□□□□□ -0.9
COL6A5-202ENST00000312481 USP15Q9Y4E8 981 aaPredicted RBP9.4□□□□□ -0.9
COL6A5-202ENST00000312481 NCKAP5LQ9HCH0 1330 aa9.4□□□□□ -0.9
COL6A5-202ENST00000312481 CLCN2P51788 898 aa9.4□□□□□ -0.9
COL6A5-202ENST00000312481 HDLBPQ00341 1268 aaKnown RBP9.4□□□□□ -0.9
COL6A5-202ENST00000312481 SLC39A6Q13433 755 aa9.4□□□□□ -0.9
COL6A5-202ENST00000312481 SESTD1Q86VW0 696 aa9.4□□□□□ -0.9
COL6A5-202ENST00000312481 TRPC7Q9HCX4 862 aa9.4□□□□□ -0.9
COL6A5-202ENST00000312481 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.4□□□□□ -0.9
COL6A5-202ENST00000312481 TM9SF1O15321 606 aa9.4□□□□□ -0.9
COL6A5-202ENST00000312481 CDC27P30260 824 aa9.4□□□□□ -0.9
COL6A5-202ENST00000312481 SERPINB6P35237 376 aa9.4□□□□□ -0.9
COL6A5-202ENST00000312481 BIRC2Q13490 618 aa9.4□□□□□ -0.9
COL6A5-202ENST00000312481 MMEL1Q495T6 779 aa9.4□□□□□ -0.9
COL6A5-202ENST00000312481 C4BPBP20851 252 aa9.4□□□□□ -0.91
COL6A5-202ENST00000312481 POLD1P28340 1107 aa9.4□□□□□ -0.91
COL6A5-202ENST00000312481 FAM83BQ5T0W9 1011 aa9.4□□□□□ -0.91
COL6A5-202ENST00000312481 KRT80Q6KB66 452 aa9.4□□□□□ -0.91
COL6A5-202ENST00000312481 MTHFD1LQ6UB35 978 aa9.4□□□□□ -0.91
COL6A5-202ENST00000312481 NLRP14Q86W24 1093 aa9.4□□□□□ -0.91
COL6A5-202ENST00000312481 VCPIP1Q96JH7 1222 aa9.4□□□□□ -0.91
COL6A5-202ENST00000312481 OLFML3Q9NRN5 406 aa9.4□□□□□ -0.91
COL6A5-202ENST00000312481 TLK1Q9UKI8 766 aa9.4□□□□□ -0.91
COL6A5-202ENST00000312481 GUCY2FP51841 1108 aa9.4□□□□□ -0.91
COL6A5-202ENST00000312481 MAPK8IP2Q13387 824 aaPredicted RBP9.4□□□□□ -0.91
COL6A5-202ENST00000312481 NAV1Q8NEY1 1877 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 TECP42680 631 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 LPAR1Q92633 364 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 PARVAQ9NVD7 372 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 ATP8A1Q9Y2Q0 1164 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 FAM47DPA6NHR8 397 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 PHF2O75151 1096 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 ARHGEF6Q15052 776 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 NAB2Q15742 525 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 PAPD7Q5XG87 772 aaKnown RBP9.39□□□□□ -0.91
COL6A5-202ENST00000312481 RCOR2Q8IZ40 523 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 LARP6Q9BRS8 491 aaKnown RBP9.39□□□□□ -0.91
COL6A5-202ENST00000312481 USP54Q70EL1 1684 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 KCNA4P22459 653 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 POLGP54098 1239 aaPredicted RBP9.39□□□□□ -0.91
COL6A5-202ENST00000312481 OCA2Q04671 838 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 NAB1Q13506 487 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 C11orf63Q6NUN7 778 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 RMDN1Q96DB5 314 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 TSPAN17Q96FV3 270 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 TRIM56Q9BRZ2 755 aaKnown RBP9.39□□□□□ -0.91
COL6A5-202ENST00000312481 AP4S1Q9Y587 144 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 BTNL10A8MVZ5 291 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 WDR64B1ANS9 1081 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 MAN1A2O60476 641 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms