RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 A0A0G2JND7 137 aa8.77□□□□□ -1.01
VPS41-202ENST00000310301 MSCO60682 206 aa8.77□□□□□ -1.01
VPS41-202ENST00000310301 NDUFA10O95299 355 aa8.77□□□□□ -1.01
VPS41-202ENST00000310301 PSMC1P62191 440 aaKnown RBP8.77□□□□□ -1.01
VPS41-202ENST00000310301 CDR2Q01850 454 aa8.77□□□□□ -1.01
VPS41-202ENST00000310301 CUL1Q13616 776 aa8.77□□□□□ -1.01
VPS41-202ENST00000310301 TRIP13Q15645 432 aaPredicted RBP8.77□□□□□ -1.01
VPS41-202ENST00000310301 ATG16L1Q676U5 607 aa8.77□□□□□ -1.01
VPS41-202ENST00000310301 KIAA2013Q8IYS2 634 aa8.77□□□□□ -1.01
VPS41-202ENST00000310301 PANX2Q96RD6 677 aa8.77□□□□□ -1.01
VPS41-202ENST00000310301 WDR11Q9BZH6 1224 aa8.77□□□□□ -1.01
VPS41-202ENST00000310301 WARS2Q9UGM6 360 aaKnown RBP8.77□□□□□ -1.01
VPS41-202ENST00000310301 A0A0D9SFI3 127 aa8.77□□□□□ -1.01
VPS41-202ENST00000310301 GMNCA6NCL1 334 aa8.77□□□□□ -1.01
VPS41-202ENST00000310301 BTBD18B2RXH4 712 aa8.77□□□□□ -1.01
VPS41-202ENST00000310301 IL1R1P14778 569 aa8.77□□□□□ -1.01
VPS41-202ENST00000310301 ABCD1P33897 745 aa8.77□□□□□ -1.01
VPS41-202ENST00000310301 ADD1P35611 737 aaKnown RBP8.77□□□□□ -1.01
VPS41-202ENST00000310301 RAD23BP54727 409 aa8.77□□□□□ -1.01
VPS41-202ENST00000310301 MAP3K7CLP57077 242 aa8.77□□□□□ -1.01
VPS41-202ENST00000310301 SPDYE2Q495Y8 402 aa8.77□□□□□ -1.01
VPS41-202ENST00000310301 KCTD1Q719H9 257 aa8.77□□□□□ -1.01
VPS41-202ENST00000310301 ILDR2Q71H61 639 aa8.77□□□□□ -1.01
VPS41-202ENST00000310301 NLRP14Q86W24 1093 aa8.77□□□□□ -1.01
VPS41-202ENST00000310301 PSPC1Q8WXF1 523 aaKnown RBP8.77□□□□□ -1.01
VPS41-202ENST00000310301 PFASO15067 1338 aa8.77□□□□□ -1.01
VPS41-202ENST00000310301 FAM205AQ6ZU69 1335 aa8.77□□□□□ -1.01
VPS41-202ENST00000310301 ENO4A6NNW6 628 aa8.77□□□□□ -1.01
VPS41-202ENST00000310301 SLFN14P0C7P3 912 aa8.77□□□□□ -1.01
VPS41-202ENST00000310301 CA4P22748 312 aa8.77□□□□□ -1.01
VPS41-202ENST00000310301 ITKQ08881 620 aa8.77□□□□□ -1.01
VPS41-202ENST00000310301 PDIA6Q15084 440 aa8.77□□□□□ -1.01
VPS41-202ENST00000310301 PCSK9Q8NBP7 692 aaKnown RBP8.77□□□□□ -1.01
VPS41-202ENST00000310301 METTL14Q9HCE5 456 aaKnown RBP8.77□□□□□ -1.01
VPS41-202ENST00000310301 NMRK2Q9NPI5 230 aa8.77□□□□□ -1.01
VPS41-202ENST00000310301 PPP6R2O75170 966 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 CPP00450 1065 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 NSFP46459 744 aaKnown RBP8.76□□□□□ -1.01
VPS41-202ENST00000310301 NAA30Q147X3 362 aaPredicted RBP8.76□□□□□ -1.01
VPS41-202ENST00000310301 SRLQ86TD4 932 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 GSPT2Q8IYD1 628 aaKnown RBP8.76□□□□□ -1.01
VPS41-202ENST00000310301 FANCBQ8NB91 859 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 ENOX1Q8TC92 643 aaKnown RBP8.76□□□□□ -1.01
VPS41-202ENST00000310301 NSUN4Q96CB9 384 aaKnown RBP8.76□□□□□ -1.01
VPS41-202ENST00000310301 EDC3Q96F86 508 aaKnown RBP8.76□□□□□ -1.01
VPS41-202ENST00000310301 GSDMAQ96QA5 445 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 SMYD3Q9H7B4 428 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 ZFP69BQ9UJL9 534 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 GPR75-ASB3A0A0A6YYF3 556 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 P4HA1P13674 534 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 SLC12A1Q13621 1099 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 LLGL1Q15334 1064 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 MUM1L1Q5H9M0 696 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 C1orf146Q5VVC0 180 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 SAMSN1Q9NSI8 373 aaKnown RBP8.76□□□□□ -1.01
VPS41-202ENST00000310301 MYO1FO00160 1098 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 OR52Z1P0C646 297 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 CCDC159P0C7I6 412 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 KCNA4P22459 653 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 EIF4A3P38919 411 aaKnown RBP8.76□□□□□ -1.01
VPS41-202ENST00000310301 PSMD2Q13200 908 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 DGKZQ13574 1117 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 CDC37Q16543 378 aaPredicted RBP8.76□□□□□ -1.01
VPS41-202ENST00000310301 KIAA1841Q6NSI8 718 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 RAB44Q7Z6P3 723 aaPredicted RBP8.76□□□□□ -1.01
VPS41-202ENST00000310301 ZBTB33Q86T24 672 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 TNS4Q8IZW8 715 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 DTNBP1Q96EV8 351 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 KIFC3Q9BVG8 833 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 UPF3AQ9H1J1 476 aaKnown RBP8.76□□□□□ -1.01
VPS41-202ENST00000310301 DCP1AQ9NPI6 582 aaPredicted RBP8.76□□□□□ -1.01
VPS41-202ENST00000310301 ARHGAP10A1A4S6 786 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 ADM5C9JUS6 153 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 ACSL3O95573 720 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 SKOR1P84550 965 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 PTGDRQ13258 359 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 PPIL2Q13356 520 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 FAM102BQ5T8I3 360 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 TOGARAM2Q6ZUX3 1019 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 SESTD1Q86VW0 696 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 SLC7A3Q8WY07 619 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 DYNLL2Q96FJ2 89 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 STAP2Q9UGK3 403 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 LZTS1Q9Y250 596 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 IFT172Q9UG01 1749 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 LTBP3Q9NS15 1303 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 F5H6K3 240 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 RPLP2P05387 115 aaKnown RBP8.76□□□□□ -1.01
VPS41-202ENST00000310301 MYL7Q01449 175 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 KLRC3Q07444 240 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 SLC39A14Q15043 492 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 GRAMD1CQ8IYS0 662 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 PRMT6Q96LA8 375 aaPredicted RBP8.76□□□□□ -1.01
VPS41-202ENST00000310301 MRIQ9BWK5 157 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 POLR3EQ9NVU0 708 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 NYAP2Q9P242 653 aa8.76□□□□□ -1.01
VPS41-202ENST00000310301 PPARGC1AQ9UBK2 798 aaKnown RBP8.76□□□□□ -1.01
VPS41-202ENST00000310301 PAIP2BQ9ULR5 123 aaKnown RBP8.76□□□□□ -1.01
VPS41-202ENST00000310301 K7ENM7 598 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 GCFC2P16383 781 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms