RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 HAUS1Q96CS2 278 aa15.78■□□□□ 0.12
PTPN9-201ENST00000306726 C18orf8Q96DM3 657 aa15.78■□□□□ 0.12
PTPN9-201ENST00000306726 UBE2TQ9NPD8 197 aaPredicted RBP15.78■□□□□ 0.12
PTPN9-201ENST00000306726 ANAPC4Q9UJX5 808 aa15.78■□□□□ 0.12
PTPN9-201ENST00000306726 PCDHAC2Q9Y5I4 1007 aa15.78■□□□□ 0.12
PTPN9-201ENST00000306726 CHD4Q14839 1912 aa15.78■□□□□ 0.12
PTPN9-201ENST00000306726 GPR162Q16538 588 aa15.78■□□□□ 0.12
PTPN9-201ENST00000306726 IFI16Q16666 785 aaKnown RBP15.78■□□□□ 0.12
PTPN9-201ENST00000306726 PPP1R18Q6NYC8 613 aa15.78■□□□□ 0.12
PTPN9-201ENST00000306726 HS2ST1Q7LGA3 356 aa15.78■□□□□ 0.12
PTPN9-201ENST00000306726 FBXO25Q8TCJ0 367 aa15.78■□□□□ 0.12
PTPN9-201ENST00000306726 TAS2R14Q9NYV8 317 aa15.78■□□□□ 0.12
PTPN9-201ENST00000306726 DNAJC12Q9UKB3 198 aa15.78■□□□□ 0.12
PTPN9-201ENST00000306726 FZD9O00144 591 aa15.77■□□□□ 0.12
PTPN9-201ENST00000306726 DRAP1Q14919 205 aaPredicted RBP15.77■□□□□ 0.12
PTPN9-201ENST00000306726 NAB2Q15742 525 aa15.77■□□□□ 0.12
PTPN9-201ENST00000306726 REEP2Q9BRK0 252 aa15.77■□□□□ 0.12
PTPN9-201ENST00000306726 PPP1R12CQ9BZL4 782 aa15.77■□□□□ 0.12
PTPN9-201ENST00000306726 KLHL11Q9NVR0 708 aa15.77■□□□□ 0.12
PTPN9-201ENST00000306726 BAZ2AQ9UIF9 1905 aaKnown RBP15.77■□□□□ 0.12
PTPN9-201ENST00000306726 USP20Q9Y2K6 914 aa15.77■□□□□ 0.12
PTPN9-201ENST00000306726 LRRC63Q05C16 580 aa15.77■□□□□ 0.12
PTPN9-201ENST00000306726 ODR4Q5SWX8 454 aa15.77■□□□□ 0.12
PTPN9-201ENST00000306726 PRUNE1Q86TP1 453 aa15.77■□□□□ 0.12
PTPN9-201ENST00000306726 FAM186BQ8IYM0 893 aa15.77■□□□□ 0.12
PTPN9-201ENST00000306726 SLC35G2Q8TBE7 412 aa15.77■□□□□ 0.12
PTPN9-201ENST00000306726 SCFD1Q8WVM8 642 aa15.77■□□□□ 0.12
PTPN9-201ENST00000306726 ZMYND12Q9H0C1 365 aa15.77■□□□□ 0.12
PTPN9-201ENST00000306726 ALG13Q9NP73 1137 aaKnown RBP15.77■□□□□ 0.12
PTPN9-201ENST00000306726 AKAP3O75969 853 aa15.77■□□□□ 0.11
PTPN9-201ENST00000306726 DLATP10515 647 aaKnown RBP15.77■□□□□ 0.11
PTPN9-201ENST00000306726 ZNF844Q08AG5 666 aa15.77■□□□□ 0.11
PTPN9-201ENST00000306726 UBAP2Q5T6F2 1119 aaKnown RBP15.77■□□□□ 0.11
PTPN9-201ENST00000306726 NAGPAQ9UK23 515 aa15.77■□□□□ 0.11
PTPN9-201ENST00000306726 INTUQ9ULD6 942 aa15.77■□□□□ 0.11
PTPN9-201ENST00000306726 PPP1R9AQ9ULJ8 1098 aa15.77■□□□□ 0.11
PTPN9-201ENST00000306726 MYO5AQ9Y4I1 1855 aaKnown RBP15.77■□□□□ 0.11
PTPN9-201ENST00000306726 POC1B-GALNT4F8VUJ3 575 aa15.76■□□□□ 0.11
PTPN9-201ENST00000306726 IFNB1P01574 187 aa15.76■□□□□ 0.11
PTPN9-201ENST00000306726 MARCKSL1P49006 195 aa15.76■□□□□ 0.11
PTPN9-201ENST00000306726 DPH6Q7L8W6 267 aa15.76■□□□□ 0.11
PTPN9-201ENST00000306726 CCDC197Q8NCU1 140 aa15.76■□□□□ 0.11
PTPN9-201ENST00000306726 TTC7AQ9ULT0 858 aaPredicted RBP15.76■□□□□ 0.11
PTPN9-201ENST00000306726 SUFUQ9UMX1 484 aa15.76■□□□□ 0.11
PTPN9-201ENST00000306726 CCDC169A6NNP5 214 aa15.76■□□□□ 0.11
PTPN9-201ENST00000306726 MYCNP04198 464 aaPredicted RBP15.76■□□□□ 0.11
PTPN9-201ENST00000306726 CALCOCO2Q13137 446 aa15.76■□□□□ 0.11
PTPN9-201ENST00000306726 LMBRD2Q68DH5 695 aaPredicted RBP15.76■□□□□ 0.11
PTPN9-201ENST00000306726 PARP9Q8IXQ6 854 aa15.76■□□□□ 0.11
PTPN9-201ENST00000306726 LRRC34Q8IZ02 419 aa15.76■□□□□ 0.11
PTPN9-201ENST00000306726 WHAMMQ8TF30 809 aa15.76■□□□□ 0.11
PTPN9-201ENST00000306726 SEMA4AQ9H3S1 761 aa15.76■□□□□ 0.11
PTPN9-201ENST00000306726 VEZTQ9HBM0 779 aa15.76■□□□□ 0.11
PTPN9-201ENST00000306726 TRIM33Q9UPN9 1127 aa15.76■□□□□ 0.11
PTPN9-201ENST00000306726 MYH6P13533 1939 aa15.76■□□□□ 0.11
PTPN9-201ENST00000306726 GPR75-ASB3A0A0A6YYF3 556 aa15.76■□□□□ 0.11
PTPN9-201ENST00000306726 HMGB1P1B2RPK0 211 aaPredicted RBP15.76■□□□□ 0.11
PTPN9-201ENST00000306726 NR3C1P04150 777 aa15.76■□□□□ 0.11
PTPN9-201ENST00000306726 SLC20A2Q08357 652 aa15.76■□□□□ 0.11
PTPN9-201ENST00000306726 SEPT7Q16181 437 aaKnown RBP15.76■□□□□ 0.11
PTPN9-201ENST00000306726 PRPF38AQ8NAV1 312 aaKnown RBP15.76■□□□□ 0.11
PTPN9-201ENST00000306726 MTMR14Q8NCE2 650 aa15.76■□□□□ 0.11
PTPN9-201ENST00000306726 LMBR1Q8WVP7 490 aa15.76■□□□□ 0.11
PTPN9-201ENST00000306726 ATG4AQ8WYN0 398 aa15.76■□□□□ 0.11
PTPN9-201ENST00000306726 KCNQ5Q9NR82 932 aa15.76■□□□□ 0.11
PTPN9-201ENST00000306726 FLT1P17948 1338 aa15.75■□□□□ 0.11
PTPN9-201ENST00000306726 PALM3A6NDB9 673 aaPredicted RBP15.75■□□□□ 0.11
PTPN9-201ENST00000306726 DNM1LO00429 736 aa15.75■□□□□ 0.11
PTPN9-201ENST00000306726 NPM3O75607 178 aaKnown RBP15.75■□□□□ 0.11
PTPN9-201ENST00000306726 LRRC55Q6ZSA7 311 aa15.75■□□□□ 0.11
PTPN9-201ENST00000306726 THAP2Q9H0W7 228 aa15.75■□□□□ 0.11
PTPN9-201ENST00000306726 FGFR1OP2Q9NVK5 253 aa15.75■□□□□ 0.11
PTPN9-201ENST00000306726 SPAG7O75391 227 aa15.75■□□□□ 0.11
PTPN9-201ENST00000306726 PAX7P23759 505 aa15.75■□□□□ 0.11
PTPN9-201ENST00000306726 QRICH1Q2TAL8 776 aa15.75■□□□□ 0.11
PTPN9-201ENST00000306726 HGSNATQ68CP4 663 aa15.75■□□□□ 0.11
PTPN9-201ENST00000306726 CYB5D1Q6P9G0 228 aa15.75■□□□□ 0.11
PTPN9-201ENST00000306726 RPAINQ86UA6 219 aa15.75■□□□□ 0.11
PTPN9-201ENST00000306726 ERMNQ8TAM6 284 aa15.75■□□□□ 0.11
PTPN9-201ENST00000306726 TSKSQ9UJT2 592 aa15.75■□□□□ 0.11
PTPN9-201ENST00000306726 FRMD4BQ9Y2L6 1034 aa15.75■□□□□ 0.11
PTPN9-201ENST00000306726 PCP11498 1178 aaKnown RBP15.75■□□□□ 0.11
PTPN9-201ENST00000306726 PALB2Q86YC2 1186 aa15.75■□□□□ 0.11
PTPN9-201ENST00000306726 FAM178BQ8IXR5 827 aa15.75■□□□□ 0.11
PTPN9-201ENST00000306726 ZDHHC15Q96MV8 337 aa15.75■□□□□ 0.11
PTPN9-201ENST00000306726 TMOD2Q9NZR1 351 aa15.75■□□□□ 0.11
PTPN9-201ENST00000306726 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.75■□□□□ 0.11
PTPN9-201ENST00000306726 CTNNAL1Q9UBT7 734 aa15.75■□□□□ 0.11
PTPN9-201ENST00000306726 AJAP1Q9UKB5 411 aaPredicted RBP15.75■□□□□ 0.11
PTPN9-201ENST00000306726 ENO4A6NNW6 628 aa15.74■□□□□ 0.11
PTPN9-201ENST00000306726 CHUKO15111 745 aa15.74■□□□□ 0.11
PTPN9-201ENST00000306726 FAM107AO95990 144 aa15.74■□□□□ 0.11
PTPN9-201ENST00000306726 GCKP35557 465 aa15.74■□□□□ 0.11
PTPN9-201ENST00000306726 VSIG1Q86XK7 387 aa15.74■□□□□ 0.11
PTPN9-201ENST00000306726 SRRM1Q8IYB3 904 aaKnown RBP15.74■□□□□ 0.11
PTPN9-201ENST00000306726 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.74■□□□□ 0.11
PTPN9-201ENST00000306726 TMEM150BA6NC51 233 aa15.74■□□□□ 0.11
PTPN9-201ENST00000306726 GOLGA8SH3BPF8 625 aa15.74■□□□□ 0.11
PTPN9-201ENST00000306726 GOLGA8MH3BSY2 632 aa15.74■□□□□ 0.11
PTPN9-201ENST00000306726 NOL4O94818 638 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms