RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 KSR1Q8IVT5 923 aa12.19□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 ZBTB8OSQ8IWT0 167 aa12.19□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 SYT2Q8N9I0 419 aaPredicted RBP12.19□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 PHOSPHO2Q8TCD6 241 aa12.19□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 LARP4BQ92615 738 aaKnown RBP12.19□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 KIFAP3Q92845 792 aa12.19□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 DRC1Q96MC2 740 aa12.19□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 ZBED2Q9BTP6 218 aa12.19□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 OSBPL7Q9BZF2 842 aa12.19□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 SCAND2PQ9GZW5 306 aaPredicted RBP12.19□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 GPRC5CQ9NQ84 441 aa12.19□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 RNF216Q9NWF9 866 aaPredicted RBP12.19□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 FAM13BQ9NYF5 915 aa12.19□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 KCND2Q9NZV8 630 aa12.19□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 MSRAQ9UJ68 235 aa12.19□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 ST3GAL5Q9UNP4 418 aa12.19□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 TRIOBPQ9H2D6 2365 aa12.19□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 RALGAPA2Q2PPJ7 1873 aa12.19□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 KRT18P05783 430 aaKnown RBP12.18□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 ZSCAN20P17040 1043 aaPredicted RBP12.18□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 GLRA2P23416 452 aa12.18□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 ARL2P36404 184 aa12.18□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 SLC12A3P55017 1021 aa12.18□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 DEFB103AP81534 67 aa12.18□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 NCBP1Q09161 790 aaKnown RBP12.18□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 DMP1Q13316 513 aaPredicted RBP12.18□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 CAPSQ13938 189 aa12.18□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 DHX8Q14562 1220 aaKnown RBP12.18□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 RAB30Q15771 203 aa12.18□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 TCTN1Q2MV58 587 aa12.18□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 RINT1Q6NUQ1 792 aa12.18□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 DEPTORQ8TB45 409 aa12.18□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 ASAP3Q8TDY4 903 aa12.18□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 RAD54LQ92698 747 aa12.18□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 C2orf40Q9H1Z8 148 aa12.18□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 C1orf112Q9NSG2 853 aa12.18□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 FNDC1Q4ZHG4 1894 aaPredicted RBP12.18□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 KIAA1671Q9BY89 1806 aa12.17□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 INO80B-WBP1J3KQ70 363 aa12.17□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 TLL1O43897 1013 aa12.17□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 HIP1RO75146 1068 aa12.17□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 IBSPP21815 317 aaPredicted RBP12.17□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 FGFR4P22455 802 aa12.17□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 GUCY2CP25092 1073 aa12.17□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 DDIT3P35638 169 aa12.17□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 NAMPTP43490 491 aa12.17□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 POU5F1BQ06416 359 aa12.17□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 MCM6Q14566 821 aa12.17□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 PCBP1Q15365 356 aaKnown RBP eCLIP12.17□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.17□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 USP49Q70CQ1 688 aa12.17□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 GPBP1Q86WP2 473 aa12.17□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 HERC6Q8IVU3 1022 aa12.17□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 LEO1Q8WVC0 666 aaPredicted RBP12.17□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 PYM1Q9BRP8 204 aaKnown RBP12.17□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 RUSC1Q9BVN2 902 aa12.17□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 IFT122Q9HBG6 1241 aa12.17□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 DACT1Q9NYF0 836 aa12.17□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 RCOR1Q9UKL0 485 aa12.17□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 LRFN2Q9ULH4 789 aa12.17□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 PCDHA7Q9UN72 937 aa12.17□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 PIN4Q9Y237 131 aaKnown RBP12.17□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 PHLPP2Q6ZVD8 1323 aa12.16□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 TBCAO75347 108 aaKnown RBP12.16□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 CSDE1O75534 798 aaKnown RBP12.16□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 UPP2O95045 317 aa12.16□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 STAG3L1P0CL83 205 aa12.16□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 DNAJB2P25686 324 aa12.16□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 PTENP60484 403 aa12.16□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 RAD51AP2Q09MP3 1159 aa12.16□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 TMEM132AQ24JP5 1023 aa12.16□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 TWF2Q6IBS0 349 aaKnown RBP12.16□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 FAM117BQ6P1L5 589 aa12.16□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 C1orf186Q6ZWK4 172 aa12.16□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 SV2BQ7L1I2 683 aa12.16□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 PDILTQ8N807 584 aa12.16□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 YME1L1Q96TA2 773 aa12.16□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 ADAM2Q99965 735 aa12.16□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 NFKBIZQ9BYH8 718 aa12.16□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 TSPYL2Q9H2G4 693 aaPredicted RBP12.16□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 CUEDC2Q9H467 287 aa12.16□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 C17orf75Q9HAS0 396 aa12.16□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 BLOC1S4Q9NUP1 217 aa12.16□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 CHMP5Q9NZZ3 219 aa12.16□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 KCNG1Q9UIX4 513 aa12.16□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 ODF2LQ9ULJ1 636 aa12.16□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 TDRD15B5MCY1 1934 aaKnown RBP12.15□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.15□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 GOLGA6L4A6NEF3 574 aa12.15□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 CCDC169A6NNP5 214 aa12.15□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 GRXCR1A8MXD5 290 aa12.15□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 SOX1O00570 391 aaPredicted RBP12.15□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 ENPP3O14638 875 aa12.15□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 FAM13AO94988 1023 aa12.15□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 GJB5O95377 273 aa12.15□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 AXLP30530 894 aa12.15□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 SARSP49591 514 aaKnown RBP12.15□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 RABGGTBP53611 331 aa12.15□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 SMTNP53814 917 aa12.15□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 PEX3P56589 373 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms