RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 TTC13Q8NBP0 860 aa17.07■□□□□ 0.32
USP42-201ENST00000306177 MTMR4Q9NYA4 1195 aa17.07■□□□□ 0.32
USP42-201ENST00000306177 TTC26A0AVF1 554 aa17.07■□□□□ 0.32
USP42-201ENST00000306177 FOXN1O15353 648 aa17.07■□□□□ 0.32
USP42-201ENST00000306177 EPHA7Q15375 998 aa17.07■□□□□ 0.32
USP42-201ENST00000306177 KRT39Q6A163 491 aa17.07■□□□□ 0.32
USP42-201ENST00000306177 DEPDC1BQ8WUY9 529 aa17.07■□□□□ 0.32
USP42-201ENST00000306177 LRGUKQ96M69 825 aa17.07■□□□□ 0.32
USP42-201ENST00000306177 GBP5Q96PP8 586 aa17.07■□□□□ 0.32
USP42-201ENST00000306177 PHF20Q9BVI0 1012 aa17.07■□□□□ 0.32
USP42-201ENST00000306177 DNAJC5Q9H3Z4 198 aa17.07■□□□□ 0.32
USP42-201ENST00000306177 MID2Q9UJV3 735 aa17.07■□□□□ 0.32
USP42-201ENST00000306177 WDR46O15213 610 aaKnown RBP17.07■□□□□ 0.32
USP42-201ENST00000306177 SRGAP2O75044 1071 aa17.07■□□□□ 0.32
USP42-201ENST00000306177 PLS3P13797 630 aa17.07■□□□□ 0.32
USP42-201ENST00000306177 TRIM68Q6AZZ1 485 aa17.07■□□□□ 0.32
USP42-201ENST00000306177 EP400NLQ6ZTU2 488 aa17.07■□□□□ 0.32
USP42-201ENST00000306177 ABT1Q9ULW3 272 aaKnown RBP17.07■□□□□ 0.32
USP42-201ENST00000306177 KRT10P13645 584 aa17.06■□□□□ 0.32
USP42-201ENST00000306177 TFDP2Q14188 446 aa17.06■□□□□ 0.32
USP42-201ENST00000306177 DRAP1Q14919 205 aaPredicted RBP17.06■□□□□ 0.32
USP42-201ENST00000306177 ATP6V1E2Q96A05 226 aa17.06■□□□□ 0.32
USP42-201ENST00000306177 NUDCD1Q96RS6 583 aa17.06■□□□□ 0.32
USP42-201ENST00000306177 KLC2Q9H0B6 622 aa17.06■□□□□ 0.32
USP42-201ENST00000306177 POLR3FQ9H1D9 316 aaPredicted RBP17.06■□□□□ 0.32
USP42-201ENST00000306177 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.06■□□□□ 0.32
USP42-201ENST00000306177 GINM1Q9NU53 330 aa17.06■□□□□ 0.32
USP42-201ENST00000306177 ASNSD1Q9NWL6 643 aa17.06■□□□□ 0.32
USP42-201ENST00000306177 ADGRG1Q9Y653 693 aa17.06■□□□□ 0.32
USP42-201ENST00000306177 PREX1Q8TCU6 1659 aa17.06■□□□□ 0.32
USP42-201ENST00000306177 ACSL3O95573 720 aa17.06■□□□□ 0.32
USP42-201ENST00000306177 SCYL3Q8IZE3 742 aa17.06■□□□□ 0.32
USP42-201ENST00000306177 LDHDQ86WU2 507 aa17.06■□□□□ 0.32
USP42-201ENST00000306177 EPB41L4AQ9HCS5 686 aaPredicted RBP17.06■□□□□ 0.32
USP42-201ENST00000306177 REREQ9P2R6 1566 aa17.06■□□□□ 0.32
USP42-201ENST00000306177 PNMA6AP0CW24 399 aaPredicted RBP17.06■□□□□ 0.32
USP42-201ENST00000306177 FCER1AP12319 257 aa17.06■□□□□ 0.32
USP42-201ENST00000306177 PPP6R3Q5H9R7 873 aaPredicted RBP17.06■□□□□ 0.32
USP42-201ENST00000306177 METTL16Q86W50 562 aaKnown RBP17.06■□□□□ 0.32
USP42-201ENST00000306177 PASD1Q8IV76 773 aa17.06■□□□□ 0.32
USP42-201ENST00000306177 EYA4O95677 639 aa17.05■□□□□ 0.32
USP42-201ENST00000306177 FAF2Q96CS3 445 aa17.05■□□□□ 0.32
USP42-201ENST00000306177 HVCN1Q96D96 273 aa17.05■□□□□ 0.32
USP42-201ENST00000306177 C11orf70Q9BRQ4 267 aa17.05■□□□□ 0.32
USP42-201ENST00000306177 CCSER1Q9C0I3 900 aa17.05■□□□□ 0.32
USP42-201ENST00000306177 SNX24Q9Y343 169 aa17.05■□□□□ 0.32
USP42-201ENST00000306177 UBE4BO95155 1302 aa17.05■□□□□ 0.32
USP42-201ENST00000306177 CNTNAP4Q9C0A0 1308 aa17.05■□□□□ 0.32
USP42-201ENST00000306177 TOM1L1O75674 476 aa17.05■□□□□ 0.32
USP42-201ENST00000306177 TTC4O95801 387 aa17.05■□□□□ 0.32
USP42-201ENST00000306177 CA4P22748 312 aa17.05■□□□□ 0.32
USP42-201ENST00000306177 ZNF564Q8TBZ8 553 aaPredicted RBP17.05■□□□□ 0.32
USP42-201ENST00000306177 MICAL1Q8TDZ2 1067 aa17.05■□□□□ 0.32
USP42-201ENST00000306177 SDCCAG3Q96C92 435 aa17.05■□□□□ 0.32
USP42-201ENST00000306177 KIF9Q9HAQ2 790 aa17.05■□□□□ 0.32
USP42-201ENST00000306177 TUFT1Q9NNX1 390 aa17.05■□□□□ 0.32
USP42-201ENST00000306177 PLAAQ9Y263 795 aa17.05■□□□□ 0.32
USP42-201ENST00000306177 KIF3CO14782 793 aa17.05■□□□□ 0.32
USP42-201ENST00000306177 IQCB1Q15051 598 aa17.05■□□□□ 0.32
USP42-201ENST00000306177 CEP55Q53EZ4 464 aa17.05■□□□□ 0.32
USP42-201ENST00000306177 BEST2Q8NFU1 509 aa17.05■□□□□ 0.32
USP42-201ENST00000306177 CERKQ8TCT0 537 aa17.05■□□□□ 0.32
USP42-201ENST00000306177 TUBB6Q9BUF5 446 aa17.05■□□□□ 0.32
USP42-201ENST00000306177 SLC4A1P02730 911 aa17.05■□□□□ 0.32
USP42-201ENST00000306177 CIITAP33076 1130 aa17.05■□□□□ 0.32
USP42-201ENST00000306177 TSTA3Q13630 321 aaPredicted RBP17.05■□□□□ 0.32
USP42-201ENST00000306177 SPOPLQ6IQ16 392 aa17.05■□□□□ 0.32
USP42-201ENST00000306177 FRMD5Q7Z6J6 570 aa17.05■□□□□ 0.32
USP42-201ENST00000306177 RHPN2Q8IUC4 686 aa17.05■□□□□ 0.32
USP42-201ENST00000306177 MRPL4Q9BYD3 311 aaKnown RBP17.05■□□□□ 0.32
USP42-201ENST00000306177 DNAJC17Q9NVM6 304 aaKnown RBP17.05■□□□□ 0.32
USP42-201ENST00000306177 CEP170BQ9Y4F5 1589 aaPredicted RBP17.04■□□□□ 0.32
USP42-201ENST00000306177 TTI1O43156 1089 aa17.04■□□□□ 0.32
USP42-201ENST00000306177 HUS1O60921 280 aa17.04■□□□□ 0.32
USP42-201ENST00000306177 COPB2P35606 906 aa17.04■□□□□ 0.32
USP42-201ENST00000306177 ARL4CP56559 192 aa17.04■□□□□ 0.32
USP42-201ENST00000306177 ANTXR2P58335 489 aa17.04■□□□□ 0.32
USP42-201ENST00000306177 ZNF543Q08ER8 600 aa17.04■□□□□ 0.32
USP42-201ENST00000306177 ENOSF1Q7L5Y1 443 aa17.04■□□□□ 0.32
USP42-201ENST00000306177 FBXO33Q7Z6M2 555 aa17.04■□□□□ 0.32
USP42-201ENST00000306177 GDAP1Q8TB36 358 aa17.04■□□□□ 0.32
USP42-201ENST00000306177 RNF181Q9P0P0 153 aa17.04■□□□□ 0.32
USP42-201ENST00000306177 CPSF2Q9P2I0 782 aaKnown RBP17.04■□□□□ 0.32
USP42-201ENST00000306177 ZNRF3Q9ULT6 936 aa17.04■□□□□ 0.32
USP42-201ENST00000306177 RRP15Q9Y3B9 282 aaKnown RBP17.04■□□□□ 0.32
USP42-201ENST00000306177 PCDHA10Q9Y5I2 948 aa17.04■□□□□ 0.32
USP42-201ENST00000306177 THEM5Q8N1Q8 247 aa17.04■□□□□ 0.32
USP42-201ENST00000306177 ZNF710Q8N1W2 664 aa17.04■□□□□ 0.32
USP42-201ENST00000306177 NUP85Q9BW27 656 aa17.04■□□□□ 0.32
USP42-201ENST00000306177 EDEM3Q9BZQ6 932 aa17.04■□□□□ 0.32
USP42-201ENST00000306177 SAYSD1Q9NPB0 183 aa17.04■□□□□ 0.32
USP42-201ENST00000306177 MAP2K2P36507 400 aa17.04■□□□□ 0.32
USP42-201ENST00000306177 MRPS25P82663 173 aaKnown RBP17.04■□□□□ 0.32
USP42-201ENST00000306177 MYLK4Q86YV6 388 aaPredicted RBP17.04■□□□□ 0.32
USP42-201ENST00000306177 KLHL29Q96CT2 875 aa17.04■□□□□ 0.32
USP42-201ENST00000306177 PDLIM2Q96JY6 352 aa17.04■□□□□ 0.32
USP42-201ENST00000306177 HAUS8Q9BT25 410 aa17.04■□□□□ 0.32
USP42-201ENST00000306177 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.04■□□□□ 0.32
USP42-201ENST00000306177 OPHN1O60890 802 aa17.04■□□□□ 0.32
USP42-201ENST00000306177 GPD1LQ8N335 351 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms