RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 CHN1P15882 459 aa14.27□□□□□ -0.12
DDX54-201ENST00000306014 YWHAGP61981 247 aaKnown RBP eCLIP14.27□□□□□ -0.12
DDX54-201ENST00000306014 TAF11Q15544 211 aa14.27□□□□□ -0.12
DDX54-201ENST00000306014 APBB1IPQ7Z5R6 666 aaPredicted RBP14.27□□□□□ -0.12
DDX54-201ENST00000306014 MYCBPAPQ8TBZ2 947 aa14.27□□□□□ -0.12
DDX54-201ENST00000306014 CFAP57Q96MR6 1250 aa14.27□□□□□ -0.12
DDX54-201ENST00000306014 NAGPAQ9UK23 515 aa14.27□□□□□ -0.12
DDX54-201ENST00000306014 CLEC11AQ9Y240 323 aa14.27□□□□□ -0.12
DDX54-201ENST00000306014 WTIPA6NIX2 430 aaPredicted RBP14.27□□□□□ -0.13
DDX54-201ENST00000306014 STAM2O75886 525 aa14.27□□□□□ -0.13
DDX54-201ENST00000306014 HADHQ16836 314 aaKnown RBP14.27□□□□□ -0.13
DDX54-201ENST00000306014 BRDTQ58F21 947 aaPredicted RBP14.27□□□□□ -0.13
DDX54-201ENST00000306014 EMSYQ7Z589 1322 aa14.27□□□□□ -0.13
DDX54-201ENST00000306014 TXNRD3Q86VQ6 643 aa14.27□□□□□ -0.13
DDX54-201ENST00000306014 GBP7Q8N8V2 638 aaPredicted RBP14.27□□□□□ -0.13
DDX54-201ENST00000306014 MDM1Q8TC05 714 aa14.27□□□□□ -0.13
DDX54-201ENST00000306014 TRIM11Q96F44 468 aa14.27□□□□□ -0.13
DDX54-201ENST00000306014 NOP53Q9NZM5 478 aaKnown RBP14.27□□□□□ -0.13
DDX54-201ENST00000306014 LOC102724159A0A0B4J2E5 919 aa14.27□□□□□ -0.13
DDX54-201ENST00000306014 TXNDC9O14530 226 aa14.27□□□□□ -0.13
DDX54-201ENST00000306014 NDC80O14777 642 aa14.27□□□□□ -0.13
DDX54-201ENST00000306014 KRT1P04264 644 aa14.27□□□□□ -0.13
DDX54-201ENST00000306014 POLGP54098 1239 aaPredicted RBP14.27□□□□□ -0.13
DDX54-201ENST00000306014 PWP2Q15269 919 aaKnown RBP14.27□□□□□ -0.13
DDX54-201ENST00000306014 KLHDC7AQ5VTJ3 777 aa14.27□□□□□ -0.13
DDX54-201ENST00000306014 CC2D2BQ6DHV5 1058 aa14.27□□□□□ -0.13
DDX54-201ENST00000306014 INTS5Q6P9B9 1019 aaKnown RBP14.27□□□□□ -0.13
DDX54-201ENST00000306014 KDM7AQ6ZMT4 941 aa14.27□□□□□ -0.13
DDX54-201ENST00000306014 LRP10Q7Z4F1 713 aa14.27□□□□□ -0.13
DDX54-201ENST00000306014 CFAP61Q8NHU2 1237 aa14.27□□□□□ -0.13
DDX54-201ENST00000306014 SYN2Q92777 582 aaPredicted RBP14.27□□□□□ -0.13
DDX54-201ENST00000306014 HAUS1Q96CS2 278 aa14.27□□□□□ -0.13
DDX54-201ENST00000306014 PRMT1Q99873 361 aaKnown RBP14.27□□□□□ -0.13
DDX54-201ENST00000306014 JMJD4Q9H9V9 463 aa14.27□□□□□ -0.13
DDX54-201ENST00000306014 TXLNGQ9NUQ3 528 aa14.27□□□□□ -0.13
DDX54-201ENST00000306014 SEPT9Q9UHD8 586 aaPredicted RBP14.27□□□□□ -0.13
DDX54-201ENST00000306014 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.27□□□□□ -0.13
DDX54-201ENST00000306014 GOLGA8SH3BPF8 625 aa14.26□□□□□ -0.13
DDX54-201ENST00000306014 VAMP7P51809 220 aa14.26□□□□□ -0.13
DDX54-201ENST00000306014 PRELPP51888 382 aa14.26□□□□□ -0.13
DDX54-201ENST00000306014 DHX34Q14147 1143 aaKnown RBP14.26□□□□□ -0.13
DDX54-201ENST00000306014 RCSD1Q6JBY9 416 aa14.26□□□□□ -0.13
DDX54-201ENST00000306014 SCYL2Q6P3W7 929 aa14.26□□□□□ -0.13
DDX54-201ENST00000306014 CREG2Q8IUH2 290 aa14.26□□□□□ -0.13
DDX54-201ENST00000306014 PICK1Q9NRD5 415 aa14.26□□□□□ -0.13
DDX54-201ENST00000306014 GINS2Q9Y248 185 aa14.26□□□□□ -0.13
DDX54-201ENST00000306014 DAGLAQ9Y4D2 1042 aa14.26□□□□□ -0.13
DDX54-201ENST00000306014 PEAK1Q9H792 1746 aa14.26□□□□□ -0.13
DDX54-201ENST00000306014 LRRD1A4D1F6 860 aa14.26□□□□□ -0.13
DDX54-201ENST00000306014 ARHGAP42A6NI28 874 aa14.26□□□□□ -0.13
DDX54-201ENST00000306014 LUC7L3O95232 432 aaKnown RBP14.26□□□□□ -0.13
DDX54-201ENST00000306014 EIF2AK2P19525 551 aaKnown RBP14.26□□□□□ -0.13
DDX54-201ENST00000306014 CRKP46108 304 aa14.26□□□□□ -0.13
DDX54-201ENST00000306014 HP1BP3Q5SSJ5 553 aaPredicted RBP14.26□□□□□ -0.13
DDX54-201ENST00000306014 WDR59Q6PJI9 974 aa14.26□□□□□ -0.13
DDX54-201ENST00000306014 SDCCAG8Q86SQ7 713 aaPredicted RBP14.26□□□□□ -0.13
DDX54-201ENST00000306014 TRIM59Q8IWR1 403 aa14.26□□□□□ -0.13
DDX54-201ENST00000306014 XPO6Q96QU8 1125 aaKnown RBP14.26□□□□□ -0.13
DDX54-201ENST00000306014 TLR10Q9BXR5 811 aa14.26□□□□□ -0.13
DDX54-201ENST00000306014 RCCD1A6NED2 376 aa14.26□□□□□ -0.13
DDX54-201ENST00000306014 RASA3Q14644 834 aa14.26□□□□□ -0.13
DDX54-201ENST00000306014 MEA1Q16626 185 aa14.26□□□□□ -0.13
DDX54-201ENST00000306014 ZC2HC1CQ53FD0 456 aaPredicted RBP14.26□□□□□ -0.13
DDX54-201ENST00000306014 LINC00116Q8NCU8 138 aa14.26□□□□□ -0.13
DDX54-201ENST00000306014 GLG1Q92896 1179 aa14.26□□□□□ -0.13
DDX54-201ENST00000306014 NCAPGQ9BPX3 1015 aa14.26□□□□□ -0.13
DDX54-201ENST00000306014 MRPL47Q9HD33 250 aaKnown RBP14.26□□□□□ -0.13
DDX54-201ENST00000306014 SAYSD1Q9NPB0 183 aa14.26□□□□□ -0.13
DDX54-201ENST00000306014 H0Y3Z8 333 aa14.25□□□□□ -0.13
DDX54-201ENST00000306014 EYA4O95677 639 aa14.25□□□□□ -0.13
DDX54-201ENST00000306014 MYBL2P10244 700 aa14.25□□□□□ -0.13
DDX54-201ENST00000306014 MIGA2Q7L4E1 593 aa14.25□□□□□ -0.13
DDX54-201ENST00000306014 AGPAT1Q99943 283 aa14.25□□□□□ -0.13
DDX54-201ENST00000306014 SH2D3AQ9BRG2 576 aa14.25□□□□□ -0.13
DDX54-201ENST00000306014 STK33Q9BYT3 514 aa14.25□□□□□ -0.13
DDX54-201ENST00000306014 IL17RBQ9NRM6 502 aa14.25□□□□□ -0.13
DDX54-201ENST00000306014 CHORDC1Q9UHD1 332 aaPredicted RBP14.25□□□□□ -0.13
DDX54-201ENST00000306014 DBR1Q9UK59 544 aaKnown RBP14.25□□□□□ -0.13
DDX54-201ENST00000306014 TTC7AQ9ULT0 858 aaPredicted RBP14.25□□□□□ -0.13
DDX54-201ENST00000306014 CACNA1FO60840 1977 aa14.25□□□□□ -0.13
DDX54-201ENST00000306014 SLC16A4O15374 487 aa14.25□□□□□ -0.13
DDX54-201ENST00000306014 FMO5P49326 533 aa14.25□□□□□ -0.13
DDX54-201ENST00000306014 PPP2R5DQ14738 602 aa14.25□□□□□ -0.13
DDX54-201ENST00000306014 SPATA20Q8TB22 786 aa14.25□□□□□ -0.13
DDX54-201ENST00000306014 CALR3Q96L12 384 aaKnown RBP14.25□□□□□ -0.13
DDX54-201ENST00000306014 ESYT2A0FGR8 921 aa14.25□□□□□ -0.13
DDX54-201ENST00000306014 NOP56O00567 594 aaKnown RBP14.25□□□□□ -0.13
DDX54-201ENST00000306014 SYF2O95926 243 aaKnown RBP14.25□□□□□ -0.13
DDX54-201ENST00000306014 INHBAP08476 426 aa14.25□□□□□ -0.13
DDX54-201ENST00000306014 NPR1P16066 1061 aa14.25□□□□□ -0.13
DDX54-201ENST00000306014 AARSP49588 968 aaKnown RBP eCLIP14.25□□□□□ -0.13
DDX54-201ENST00000306014 PACS2Q86VP3 889 aa14.25□□□□□ -0.13
DDX54-201ENST00000306014 PASD1Q8IV76 773 aa14.25□□□□□ -0.13
DDX54-201ENST00000306014 KCNG1Q9UIX4 513 aa14.25□□□□□ -0.13
DDX54-201ENST00000306014 FAM153BP0C7A2 387 aa14.25□□□□□ -0.13
DDX54-201ENST00000306014 FAM153CQ494X1 144 aa14.25□□□□□ -0.13
DDX54-201ENST00000306014 PHLDB3Q6NSJ2 640 aa14.25□□□□□ -0.13
DDX54-201ENST00000306014 TPCN2Q8NHX9 752 aa14.25□□□□□ -0.13
DDX54-201ENST00000306014 AENQ8WTP8 325 aaKnown RBP14.25□□□□□ -0.13
DDX54-201ENST00000306014 FAM153AQ9UHL3 310 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms