RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 OATP04181 439 aa13.15□□□□□ -0.3
TPM3-202ENST00000302206 XRCC5P13010 732 aaKnown RBP13.15□□□□□ -0.3
TPM3-202ENST00000302206 KLK7P49862 253 aa13.15□□□□□ -0.3
TPM3-202ENST00000302206 ETF1P62495 437 aaKnown RBP13.15□□□□□ -0.3
TPM3-202ENST00000302206 KCNH2Q12809 1159 aa13.15□□□□□ -0.3
TPM3-202ENST00000302206 MKRN3Q13064 507 aaKnown RBP13.15□□□□□ -0.3
TPM3-202ENST00000302206 PPP2R5AQ15172 486 aa13.15□□□□□ -0.3
TPM3-202ENST00000302206 FAM102BQ5T8I3 360 aa13.15□□□□□ -0.3
TPM3-202ENST00000302206 WDR59Q6PJI9 974 aa13.15□□□□□ -0.3
TPM3-202ENST00000302206 ZNF662Q6ZS27 426 aa13.15□□□□□ -0.3
TPM3-202ENST00000302206 HAUS6Q7Z4H7 955 aa13.15□□□□□ -0.3
TPM3-202ENST00000302206 ZNF467Q7Z7K2 595 aaPredicted RBP13.15□□□□□ -0.3
TPM3-202ENST00000302206 FAM186BQ8IYM0 893 aa13.15□□□□□ -0.3
TPM3-202ENST00000302206 SYCP3Q8IZU3 236 aa13.15□□□□□ -0.3
TPM3-202ENST00000302206 MYRIPQ8NFW9 859 aa13.15□□□□□ -0.3
TPM3-202ENST00000302206 KIF18AQ8NI77 898 aa13.15□□□□□ -0.3
TPM3-202ENST00000302206 SMCR8Q8TEV9 937 aaPredicted RBP13.15□□□□□ -0.3
TPM3-202ENST00000302206 SEPT1Q8WYJ6 367 aa13.15□□□□□ -0.3
TPM3-202ENST00000302206 MMRN2Q9H8L6 949 aa13.15□□□□□ -0.3
TPM3-202ENST00000302206 ATP6V0A4Q9HBG4 840 aa13.15□□□□□ -0.3
TPM3-202ENST00000302206 PLCB1Q9NQ66 1216 aa13.15□□□□□ -0.3
TPM3-202ENST00000302206 AGPAT5Q9NUQ2 364 aa13.15□□□□□ -0.3
TPM3-202ENST00000302206 SEPT9Q9UHD8 586 aaPredicted RBP13.15□□□□□ -0.3
TPM3-202ENST00000302206 DDX41Q9UJV9 622 aaKnown RBP13.15□□□□□ -0.3
TPM3-202ENST00000302206 PLAGL2Q9UPG8 496 aa13.15□□□□□ -0.3
TPM3-202ENST00000302206 DAAM1Q9Y4D1 1078 aa13.15□□□□□ -0.3
TPM3-202ENST00000302206 DOCK5Q9H7D0 1870 aa13.14□□□□□ -0.31
TPM3-202ENST00000302206 TMEM150BA6NC51 233 aa13.14□□□□□ -0.31
TPM3-202ENST00000302206 CLIC2O15247 247 aa13.14□□□□□ -0.31
TPM3-202ENST00000302206 LGR5O75473 907 aa13.14□□□□□ -0.31
TPM3-202ENST00000302206 CYLC1P35663 651 aaPredicted RBP13.14□□□□□ -0.31
TPM3-202ENST00000302206 RFC5P40937 340 aa13.14□□□□□ -0.31
TPM3-202ENST00000302206 DMP1Q13316 513 aaPredicted RBP13.14□□□□□ -0.31
TPM3-202ENST00000302206 MTF1Q14872 753 aa13.14□□□□□ -0.31
TPM3-202ENST00000302206 ZNF792Q3KQV3 632 aa13.14□□□□□ -0.31
TPM3-202ENST00000302206 CCDC62Q6P9F0 684 aa13.14□□□□□ -0.31
TPM3-202ENST00000302206 TRIM65Q6PJ69 517 aa13.14□□□□□ -0.31
TPM3-202ENST00000302206 BAP1Q92560 729 aa13.14□□□□□ -0.31
TPM3-202ENST00000302206 FAM167AQ96KS9 214 aa13.14□□□□□ -0.31
TPM3-202ENST00000302206 PARK7Q99497 189 aaKnown RBP13.14□□□□□ -0.31
TPM3-202ENST00000302206 R3HDMLQ9H3Y0 253 aa13.14□□□□□ -0.31
TPM3-202ENST00000302206 ZCCHC17Q9NP64 241 aaKnown RBP13.14□□□□□ -0.31
TPM3-202ENST00000302206 NRBP2Q9NSY0 501 aa13.14□□□□□ -0.31
TPM3-202ENST00000302206 FBXL5Q9UKA1 691 aa13.14□□□□□ -0.31
TPM3-202ENST00000302206 MYO6Q9UM54 1294 aa13.14□□□□□ -0.31
TPM3-202ENST00000302206 DIS3Q9Y2L1 958 aaKnown RBP13.14□□□□□ -0.31
TPM3-202ENST00000302206 FRMD4BQ9Y2L6 1034 aa13.14□□□□□ -0.31
TPM3-202ENST00000302206 EPN1Q9Y6I3 576 aaPredicted RBP13.14□□□□□ -0.31
TPM3-202ENST00000302206 HTTP42858 3142 aa13.13□□□□□ -0.31
TPM3-202ENST00000302206 FKTNO75072 461 aa13.13□□□□□ -0.31
TPM3-202ENST00000302206 NDUFA10O95299 355 aa13.13□□□□□ -0.31
TPM3-202ENST00000302206 GGPS1O95749 300 aa13.13□□□□□ -0.31
TPM3-202ENST00000302206 PGK2P07205 417 aa13.13□□□□□ -0.31
TPM3-202ENST00000302206 CYP2C8P10632 490 aa13.13□□□□□ -0.31
TPM3-202ENST00000302206 ATP4AP20648 1035 aa13.13□□□□□ -0.31
TPM3-202ENST00000302206 GTF2F1P35269 517 aaKnown RBP eCLIP13.13□□□□□ -0.31
TPM3-202ENST00000302206 NPTX2P47972 431 aa13.13□□□□□ -0.31
TPM3-202ENST00000302206 CASP4P49662 377 aa13.13□□□□□ -0.31
TPM3-202ENST00000302206 PEX3P56589 373 aa13.13□□□□□ -0.31
TPM3-202ENST00000302206 ENPEPQ07075 957 aa13.13□□□□□ -0.31
TPM3-202ENST00000302206 CELF3Q5SZQ8 465 aaKnown RBP13.13□□□□□ -0.31
TPM3-202ENST00000302206 PDXDC1Q6P996 788 aa13.13□□□□□ -0.31
TPM3-202ENST00000302206 MAEAQ7L5Y9 396 aa13.13□□□□□ -0.31
TPM3-202ENST00000302206 MAP4K3Q8IVH8 894 aa13.13□□□□□ -0.31
TPM3-202ENST00000302206 EXOC8Q8IYI6 725 aa13.13□□□□□ -0.31
TPM3-202ENST00000302206 TMEM161BQ8NDZ6 487 aa13.13□□□□□ -0.31
TPM3-202ENST00000302206 SLC35C1Q96A29 364 aa13.13□□□□□ -0.31
TPM3-202ENST00000302206 IFT74Q96LB3 600 aa13.13□□□□□ -0.31
TPM3-202ENST00000302206 PCYT2Q99447 389 aa13.13□□□□□ -0.31
TPM3-202ENST00000302206 CHP1Q99653 195 aa13.13□□□□□ -0.31
TPM3-202ENST00000302206 LSM14BQ9BX40 385 aaKnown RBP13.13□□□□□ -0.31
TPM3-202ENST00000302206 PORCNQ9H237 461 aa13.13□□□□□ -0.31
TPM3-202ENST00000302206 DHX33Q9H6R0 707 aaKnown RBP13.13□□□□□ -0.31
TPM3-202ENST00000302206 GPRC5CQ9NQ84 441 aa13.13□□□□□ -0.31
TPM3-202ENST00000302206 KMT5AQ9NQR1 393 aa13.13□□□□□ -0.31
TPM3-202ENST00000302206 XPNPEP1Q9NQW7 623 aa13.13□□□□□ -0.31
TPM3-202ENST00000302206 FAM207AQ9NSI2 230 aaPredicted RBP13.13□□□□□ -0.31
TPM3-202ENST00000302206 CENPFP49454 3210 aa13.13□□□□□ -0.31
TPM3-202ENST00000302206 ZNFX1Q9P2E3 1918 aaKnown RBP13.13□□□□□ -0.31
TPM3-202ENST00000302206 PLXNB2O15031 1838 aa13.12□□□□□ -0.31
TPM3-202ENST00000302206 ZNF236Q9UL36 1845 aa13.12□□□□□ -0.31
TPM3-202ENST00000302206 RBM47A0AV96 593 aaKnown RBP13.12□□□□□ -0.31
TPM3-202ENST00000302206 EIF3CLB5ME19 914 aaKnown RBP13.12□□□□□ -0.31
TPM3-202ENST00000302206 EPHB6O15197 1021 aa13.12□□□□□ -0.31
TPM3-202ENST00000302206 SLC16A4O15374 487 aa13.12□□□□□ -0.31
TPM3-202ENST00000302206 NOL4O94818 638 aa13.12□□□□□ -0.31
TPM3-202ENST00000302206 SLC26A2P50443 739 aa13.12□□□□□ -0.31
TPM3-202ENST00000302206 STAT5BP51692 787 aa13.12□□□□□ -0.31
TPM3-202ENST00000302206 KRT83P78385 493 aa13.12□□□□□ -0.31
TPM3-202ENST00000302206 SP4Q02446 784 aa13.12□□□□□ -0.31
TPM3-202ENST00000302206 HSP90AA2PQ14568 343 aaPredicted RBP13.12□□□□□ -0.31
TPM3-202ENST00000302206 TARBP2Q15633 366 aaKnown RBP13.12□□□□□ -0.31
TPM3-202ENST00000302206 GBP6Q6ZN66 633 aa13.12□□□□□ -0.31
TPM3-202ENST00000302206 PLPPR4Q7Z2D5 763 aa13.12□□□□□ -0.31
TPM3-202ENST00000302206 CACNA2D4Q7Z3S7 1137 aa13.12□□□□□ -0.31
TPM3-202ENST00000302206 KSR1Q8IVT5 923 aa13.12□□□□□ -0.31
TPM3-202ENST00000302206 SCFD2Q8WU76 684 aa13.12□□□□□ -0.31
TPM3-202ENST00000302206 CEP89Q96ST8 783 aa13.12□□□□□ -0.31
TPM3-202ENST00000302206 EIF3CQ99613 913 aaKnown RBP13.12□□□□□ -0.31
TPM3-202ENST00000302206 DESI2Q9BSY9 194 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms