RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 PJA2O43164 708 aa15.53■□□□□ 0.08
CDT1-201ENST00000301019 OPHN1O60890 802 aa15.53■□□□□ 0.08
CDT1-201ENST00000301019 FLOT1O75955 427 aa15.53■□□□□ 0.08
CDT1-201ENST00000301019 NOL4O94818 638 aa15.53■□□□□ 0.08
CDT1-201ENST00000301019 OR6B1O95007 311 aa15.53■□□□□ 0.08
CDT1-201ENST00000301019 CYP1A1P04798 512 aaPredicted RBP15.53■□□□□ 0.08
CDT1-201ENST00000301019 MYBP10242 640 aa15.53■□□□□ 0.08
CDT1-201ENST00000301019 SETDB1Q15047 1291 aa15.53■□□□□ 0.08
CDT1-201ENST00000301019 GALNTL6Q49A17 601 aa15.53■□□□□ 0.08
CDT1-201ENST00000301019 CGB2Q6NT52 195 aa15.53■□□□□ 0.08
CDT1-201ENST00000301019 BICD1Q96G01 975 aa15.53■□□□□ 0.08
CDT1-201ENST00000301019 CLIC5Q9NZA1 410 aa15.53■□□□□ 0.08
CDT1-201ENST00000301019 SRRM3A6NNA2 597 aaPredicted RBP15.52■□□□□ 0.08
CDT1-201ENST00000301019 KPNB1Q14974 876 aaKnown RBP15.52■□□□□ 0.08
CDT1-201ENST00000301019 CYP4X1Q8N118 509 aa15.52■□□□□ 0.08
CDT1-201ENST00000301019 MXD3Q9BW11 206 aa15.52■□□□□ 0.08
CDT1-201ENST00000301019 UBA5Q9GZZ9 404 aa15.52■□□□□ 0.08
CDT1-201ENST00000301019 A0A1W2PQJ5 194 aa15.52■□□□□ 0.07
CDT1-201ENST00000301019 RPL21P46778 160 aaKnown RBP15.52■□□□□ 0.07
CDT1-201ENST00000301019 ASRGL1Q7L266 308 aa15.52■□□□□ 0.07
CDT1-201ENST00000301019 SLC25A41Q8N5S1 370 aa15.52■□□□□ 0.07
CDT1-201ENST00000301019 LRRC37BQ96QE4 947 aa15.52■□□□□ 0.07
CDT1-201ENST00000301019 RAB3IPQ96QF0 476 aaPredicted RBP15.52■□□□□ 0.07
CDT1-201ENST00000301019 CDCA7Q9BWT1 371 aaPredicted RBP15.52■□□□□ 0.07
CDT1-201ENST00000301019 CNNM2Q9H8M5 875 aa15.52■□□□□ 0.07
CDT1-201ENST00000301019 ARMCX3Q9UH62 379 aaPredicted RBP15.52■□□□□ 0.07
CDT1-201ENST00000301019 RPTORQ8N122 1335 aa15.51■□□□□ 0.07
CDT1-201ENST00000301019 WTIPA6NIX2 430 aaPredicted RBP15.51■□□□□ 0.07
CDT1-201ENST00000301019 LIN7AO14910 233 aaPredicted RBP15.51■□□□□ 0.07
CDT1-201ENST00000301019 DYNLL1P63167 89 aaKnown RBP15.51■□□□□ 0.07
CDT1-201ENST00000301019 CNPY1Q3B7I2 92 aa15.51■□□□□ 0.07
CDT1-201ENST00000301019 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.51■□□□□ 0.07
CDT1-201ENST00000301019 TTC1Q99614 292 aa15.51■□□□□ 0.07
CDT1-201ENST00000301019 C12orf65Q9H3J6 166 aaKnown RBP15.51■□□□□ 0.07
CDT1-201ENST00000301019 SUDS3Q9H7L9 328 aaPredicted RBP15.51■□□□□ 0.07
CDT1-201ENST00000301019 TMEM59LQ9UK28 342 aa15.51■□□□□ 0.07
CDT1-201ENST00000301019 A0A1W2PRG0 241 aa15.51■□□□□ 0.07
CDT1-201ENST00000301019 C2orf71A6NGG8 1288 aa15.51■□□□□ 0.07
CDT1-201ENST00000301019 MYMKA6NI61 221 aa15.51■□□□□ 0.07
CDT1-201ENST00000301019 SCG2P13521 617 aa15.51■□□□□ 0.07
CDT1-201ENST00000301019 MARCKSL1P49006 195 aa15.51■□□□□ 0.07
CDT1-201ENST00000301019 CDK17Q00537 523 aa15.51■□□□□ 0.07
CDT1-201ENST00000301019 PPP2R5CQ13362 524 aa15.51■□□□□ 0.07
CDT1-201ENST00000301019 KYNUQ16719 465 aa15.51■□□□□ 0.07
CDT1-201ENST00000301019 HS2ST1Q7LGA3 356 aa15.51■□□□□ 0.07
CDT1-201ENST00000301019 JAMLQ86YT9 394 aa15.51■□□□□ 0.07
CDT1-201ENST00000301019 ASAP3Q8TDY4 903 aa15.51■□□□□ 0.07
CDT1-201ENST00000301019 DDX27Q96GQ7 796 aaKnown RBP15.51■□□□□ 0.07
CDT1-201ENST00000301019 USP20Q9Y2K6 914 aa15.51■□□□□ 0.07
CDT1-201ENST00000301019 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.51■□□□□ 0.07
CDT1-201ENST00000301019 MAGEA13PA6NCF6 341 aa15.51■□□□□ 0.07
CDT1-201ENST00000301019 POTEMA6NI47 508 aa15.51■□□□□ 0.07
CDT1-201ENST00000301019 BMP15O95972 392 aa15.51■□□□□ 0.07
CDT1-201ENST00000301019 LONP1P36776 959 aaKnown RBP15.51■□□□□ 0.07
CDT1-201ENST00000301019 BCAMP50895 628 aa15.51■□□□□ 0.07
CDT1-201ENST00000301019 CPNE8Q86YQ8 564 aa15.51■□□□□ 0.07
CDT1-201ENST00000301019 CCDC105Q8IYK2 499 aa15.51■□□□□ 0.07
CDT1-201ENST00000301019 ESR2Q92731 530 aa15.51■□□□□ 0.07
CDT1-201ENST00000301019 FAM163AQ96GL9 167 aaPredicted RBP15.51■□□□□ 0.07
CDT1-201ENST00000301019 ZSCAN10Q96SZ4 725 aaPredicted RBP15.51■□□□□ 0.07
CDT1-201ENST00000301019 LRP6O75581 1613 aa15.5■□□□□ 0.07
CDT1-201ENST00000301019 WDR19Q8NEZ3 1342 aa15.5■□□□□ 0.07
CDT1-201ENST00000301019 TCRBV7S2A1N4TA0A589 114 aa15.5■□□□□ 0.07
CDT1-201ENST00000301019 CFAP69A5D8W1 941 aa15.5■□□□□ 0.07
CDT1-201ENST00000301019 USP1O94782 785 aa15.5■□□□□ 0.07
CDT1-201ENST00000301019 CYP7A1P22680 504 aa15.5■□□□□ 0.07
CDT1-201ENST00000301019 TAF1BQ53T94 588 aaPredicted RBP15.5■□□□□ 0.07
CDT1-201ENST00000301019 ZSCAN29Q8IWY8 852 aaPredicted RBP15.5■□□□□ 0.07
CDT1-201ENST00000301019 RIBC1Q8N443 379 aaPredicted RBP15.5■□□□□ 0.07
CDT1-201ENST00000301019 TNFRSF25Q93038 417 aa15.5■□□□□ 0.07
CDT1-201ENST00000301019 TUBGCP5Q96RT8 1024 aa15.5■□□□□ 0.07
CDT1-201ENST00000301019 ERP44Q9BS26 406 aa15.5■□□□□ 0.07
CDT1-201ENST00000301019 MYO5AQ9Y4I1 1855 aaKnown RBP15.5■□□□□ 0.07
CDT1-201ENST00000301019 BCL9LQ86UU0 1499 aa15.5■□□□□ 0.07
CDT1-201ENST00000301019 GFPT2O94808 682 aa15.5■□□□□ 0.07
CDT1-201ENST00000301019 FOXN2P32314 431 aa15.5■□□□□ 0.07
CDT1-201ENST00000301019 MPP3Q13368 585 aa15.5■□□□□ 0.07
CDT1-201ENST00000301019 RASGRF1Q13972 1273 aa15.5■□□□□ 0.07
CDT1-201ENST00000301019 ADGRA1Q86SQ6 560 aa15.5■□□□□ 0.07
CDT1-201ENST00000301019 BLIDQ8IZY5 108 aa15.5■□□□□ 0.07
CDT1-201ENST00000301019 C1orf131Q8NDD1 294 aaKnown RBP15.5■□□□□ 0.07
CDT1-201ENST00000301019 TTLL11Q8NHH1 800 aa15.5■□□□□ 0.07
CDT1-201ENST00000301019 TPCN2Q8NHX9 752 aa15.5■□□□□ 0.07
CDT1-201ENST00000301019 RBM17Q96I25 401 aaKnown RBP15.5■□□□□ 0.07
CDT1-201ENST00000301019 KBTBD4Q9NVX7 518 aa15.5■□□□□ 0.07
CDT1-201ENST00000301019 CEP72Q9P209 647 aa15.5■□□□□ 0.07
CDT1-201ENST00000301019 CHKBQ9Y259 395 aa15.5■□□□□ 0.07
CDT1-201ENST00000301019 PCDHGA4Q9Y5G9 962 aa15.5■□□□□ 0.07
CDT1-201ENST00000301019 PFASO15067 1338 aa15.49■□□□□ 0.07
CDT1-201ENST00000301019 SPDYE16A6NNV3 312 aaPredicted RBP15.49■□□□□ 0.07
CDT1-201ENST00000301019 BTKQ06187 659 aa15.49■□□□□ 0.07
CDT1-201ENST00000301019 KIAA1755Q5JYT7 1200 aa15.49■□□□□ 0.07
CDT1-201ENST00000301019 CYP4F22Q6NT55 531 aa15.49■□□□□ 0.07
CDT1-201ENST00000301019 TAOK1Q7L7X3 1001 aa15.49■□□□□ 0.07
CDT1-201ENST00000301019 KBTBD2Q8IY47 623 aa15.49■□□□□ 0.07
CDT1-201ENST00000301019 RBBP8NLQ8NC74 664 aaPredicted RBP15.49■□□□□ 0.07
CDT1-201ENST00000301019 TBC1D16Q8TBP0 767 aa15.49■□□□□ 0.07
CDT1-201ENST00000301019 HIC2Q96JB3 615 aa15.49■□□□□ 0.07
CDT1-201ENST00000301019 TMOD3Q9NYL9 352 aa15.49■□□□□ 0.07
CDT1-201ENST00000301019 TNS2Q63HR2 1409 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms