RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 IQCEQ6IPM2 695 aa23.89■■□□□ 1.41
TPM4-201ENST00000300933 CNKSR2Q8WXI2 1034 aa23.89■■□□□ 1.41
TPM4-201ENST00000300933 MS4A14Q96JA4 679 aa23.89■■□□□ 1.41
TPM4-201ENST00000300933 SNX12Q9UMY4 172 aa23.89■■□□□ 1.41
TPM4-201ENST00000300933 PEX3P56589 373 aa23.88■■□□□ 1.41
TPM4-201ENST00000300933 RNASE9P60153 205 aaKnown RBP23.88■■□□□ 1.41
TPM4-201ENST00000300933 ARHGAP27Q6ZUM4 889 aa23.88■■□□□ 1.41
TPM4-201ENST00000300933 FRMD4BQ9Y2L6 1034 aa23.88■■□□□ 1.41
TPM4-201ENST00000300933 NR3C2P08235 984 aa23.88■■□□□ 1.41
TPM4-201ENST00000300933 MYBL2P10244 700 aa23.88■■□□□ 1.41
TPM4-201ENST00000300933 AARSP49588 968 aaKnown RBP eCLIP23.88■■□□□ 1.41
TPM4-201ENST00000300933 KCTD19Q17RG1 926 aaPredicted RBP23.88■■□□□ 1.41
TPM4-201ENST00000300933 XKR9Q5GH70 373 aa23.88■■□□□ 1.41
TPM4-201ENST00000300933 FAM102BQ5T8I3 360 aa23.88■■□□□ 1.41
TPM4-201ENST00000300933 CREG2Q8IUH2 290 aa23.88■■□□□ 1.41
TPM4-201ENST00000300933 SYN2Q92777 582 aaPredicted RBP23.88■■□□□ 1.41
TPM4-201ENST00000300933 NUCKS1Q9H1E3 243 aaKnown RBP23.88■■□□□ 1.41
TPM4-201ENST00000300933 GOLGA8IPA6NC78 632 aa23.87■■□□□ 1.41
TPM4-201ENST00000300933 GOLGA8JA6NMD2 632 aa23.87■■□□□ 1.41
TPM4-201ENST00000300933 SLC16A3O15427 465 aaKnown RBP23.87■■□□□ 1.41
TPM4-201ENST00000300933 PALMO75781 387 aa23.87■■□□□ 1.41
TPM4-201ENST00000300933 EFCAB13Q8IY85 973 aa23.87■■□□□ 1.41
TPM4-201ENST00000300933 VIPAS39Q9H9C1 493 aa23.87■■□□□ 1.41
TPM4-201ENST00000300933 POLR2AP24928 1970 aaKnown RBP23.87■■□□□ 1.41
TPM4-201ENST00000300933 BRCA1P38398 1863 aaKnown RBP23.87■■□□□ 1.41
TPM4-201ENST00000300933 CCT5P48643 541 aa23.87■■□□□ 1.41
TPM4-201ENST00000300933 FMO5P49326 533 aa23.87■■□□□ 1.41
TPM4-201ENST00000300933 ELMO3Q96BJ8 720 aa23.87■■□□□ 1.41
TPM4-201ENST00000300933 SGIP1Q9BQI5 828 aa23.87■■□□□ 1.41
TPM4-201ENST00000300933 SEL1LQ9UBV2 794 aa23.87■■□□□ 1.41
TPM4-201ENST00000300933 ZNF214Q9UL59 606 aaPredicted RBP23.87■■□□□ 1.41
TPM4-201ENST00000300933 MAP9Q49MG5 647 aa23.87■■□□□ 1.41
TPM4-201ENST00000300933 TADA2BQ86TJ2 420 aa23.87■■□□□ 1.41
TPM4-201ENST00000300933 NOX5Q96PH1 765 aa23.87■■□□□ 1.41
TPM4-201ENST00000300933 OSBPL9Q96SU4 736 aa23.87■■□□□ 1.41
TPM4-201ENST00000300933 TLR10Q9BXR5 811 aa23.87■■□□□ 1.41
TPM4-201ENST00000300933 PLCB1Q9NQ66 1216 aa23.87■■□□□ 1.41
TPM4-201ENST00000300933 LARSQ9P2J5 1176 aaKnown RBP23.87■■□□□ 1.41
TPM4-201ENST00000300933 TMCO5BA8MYB1 307 aa23.86■■□□□ 1.41
TPM4-201ENST00000300933 RGS20O76081 388 aa23.86■■□□□ 1.41
TPM4-201ENST00000300933 LIG3P49916 1009 aa23.86■■□□□ 1.41
TPM4-201ENST00000300933 FSTL1Q12841 308 aa23.86■■□□□ 1.41
TPM4-201ENST00000300933 KLRG1Q96E93 195 aa23.86■■□□□ 1.41
TPM4-201ENST00000300933 ALS2CR12Q96Q35 445 aa23.86■■□□□ 1.41
TPM4-201ENST00000300933 TBC1D22BQ9NU19 505 aa23.86■■□□□ 1.41
TPM4-201ENST00000300933 ANO9A1A5B4 782 aa23.86■■□□□ 1.41
TPM4-201ENST00000300933 RBAK-RBAKDNI3L0D1 243 aa23.86■■□□□ 1.41
TPM4-201ENST00000300933 PJA2O43164 708 aa23.86■■□□□ 1.41
TPM4-201ENST00000300933 ARHGAP44Q17R89 818 aa23.86■■□□□ 1.41
TPM4-201ENST00000300933 TEX2Q8IWB9 1127 aa23.86■■□□□ 1.41
TPM4-201ENST00000300933 CCDC169A6NNP5 214 aa23.85■■□□□ 1.41
TPM4-201ENST00000300933 PPP1R37O75864 691 aa23.85■■□□□ 1.41
TPM4-201ENST00000300933 KCTD17Q8N5Z5 321 aa23.85■■□□□ 1.41
TPM4-201ENST00000300933 HDAC7Q8WUI4 952 aa23.85■■□□□ 1.41
TPM4-201ENST00000300933 DMAC2Q9NW81 257 aa23.85■■□□□ 1.41
TPM4-201ENST00000300933 GPRC5DQ9NZD1 345 aa23.85■■□□□ 1.41
TPM4-201ENST00000300933 ZNF112Q9UJU3 913 aa23.85■■□□□ 1.41
TPM4-201ENST00000300933 ZC3H4Q9UPT8 1303 aaKnown RBP23.85■■□□□ 1.41
TPM4-201ENST00000300933 PPP1R12BO60237 982 aaPredicted RBP23.85■■□□□ 1.41
TPM4-201ENST00000300933 TTC19Q6DKK2 380 aaPredicted RBP23.85■■□□□ 1.41
TPM4-201ENST00000300933 ANO5Q75V66 913 aa23.85■■□□□ 1.41
TPM4-201ENST00000300933 NIPA1Q7RTP0 329 aa23.85■■□□□ 1.41
TPM4-201ENST00000300933 HAUS6Q7Z4H7 955 aa23.85■■□□□ 1.41
TPM4-201ENST00000300933 REPS2Q8NFH8 660 aa23.85■■□□□ 1.41
TPM4-201ENST00000300933 KCND2Q9NZV8 630 aa23.85■■□□□ 1.41
TPM4-201ENST00000300933 CD2APQ9Y5K6 639 aa23.85■■□□□ 1.41
TPM4-201ENST00000300933 MUTP22033 750 aa23.84■■□□□ 1.41
TPM4-201ENST00000300933 DSG3P32926 999 aa23.84■■□□□ 1.41
TPM4-201ENST00000300933 STXBP4Q6ZWJ1 553 aa23.84■■□□□ 1.41
TPM4-201ENST00000300933 VSIG10LQ86VR7 867 aa23.84■■□□□ 1.41
TPM4-201ENST00000300933 SELENOOQ9BVL4 669 aa23.84■■□□□ 1.41
TPM4-201ENST00000300933 STRA6Q9BX79 667 aa23.84■■□□□ 1.41
TPM4-201ENST00000300933 AS3MTQ9HBK9 375 aa23.84■■□□□ 1.41
TPM4-201ENST00000300933 GABBR1Q9UBS5 961 aa23.84■■□□□ 1.41
TPM4-201ENST00000300933 USP20Q9Y2K6 914 aa23.84■■□□□ 1.41
TPM4-201ENST00000300933 LOC102724159A0A0B4J2E5 919 aa23.84■■□□□ 1.41
TPM4-201ENST00000300933 PWP2Q15269 919 aaKnown RBP23.84■■□□□ 1.41
TPM4-201ENST00000300933 NLRX1Q86UT6 975 aa23.84■■□□□ 1.41
TPM4-201ENST00000300933 FAM84AQ96KN4 292 aa23.84■■□□□ 1.41
TPM4-201ENST00000300933 DNAJC12Q9UKB3 198 aa23.84■■□□□ 1.41
TPM4-201ENST00000300933 COL11A1P12107 1806 aaPredicted RBP23.84■■□□□ 1.41
TPM4-201ENST00000300933 AGPSO00116 658 aa23.83■■□□□ 1.41
TPM4-201ENST00000300933 SLC7A5Q01650 507 aa23.83■■□□□ 1.41
TPM4-201ENST00000300933 GHRHRQ02643 423 aa23.83■■□□□ 1.41
TPM4-201ENST00000300933 FAM76AQ8TAV0 307 aa23.83■■□□□ 1.41
TPM4-201ENST00000300933 NEK9Q8TD19 979 aa23.83■■□□□ 1.41
TPM4-201ENST00000300933 YY1AP1Q9H869 796 aa23.83■■□□□ 1.41
TPM4-201ENST00000300933 A1CFQ9NQ94 594 aaKnown RBP23.83■■□□□ 1.41
TPM4-201ENST00000300933 ZNF862O60290 1169 aa23.83■■□□□ 1.4
TPM4-201ENST00000300933 DDNO94850 711 aaPredicted RBP23.83■■□□□ 1.4
TPM4-201ENST00000300933 PLS3P13797 630 aa23.83■■□□□ 1.4
TPM4-201ENST00000300933 GCLMP48507 274 aa23.83■■□□□ 1.4
TPM4-201ENST00000300933 PSMC5P62195 406 aa23.83■■□□□ 1.4
TPM4-201ENST00000300933 DRAP1Q14919 205 aaPredicted RBP23.83■■□□□ 1.4
TPM4-201ENST00000300933 NAB2Q15742 525 aa23.83■■□□□ 1.4
TPM4-201ENST00000300933 SWSAP1Q6NVH7 229 aa23.83■■□□□ 1.4
TPM4-201ENST00000300933 GPATCH11Q8N954 259 aa23.83■■□□□ 1.4
TPM4-201ENST00000300933 A0A087WUV0 522 aaPredicted RBP23.82■■□□□ 1.4
TPM4-201ENST00000300933 GOLGA6CA6NDK9 693 aa23.82■■□□□ 1.4
TPM4-201ENST00000300933 WDR64B1ANS9 1081 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms