RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 GSTA1P08263 222 aa15.82■□□□□ 0.12
COL6A2-201ENST00000300527 CALCOCO2Q13137 446 aa15.82■□□□□ 0.12
COL6A2-201ENST00000300527 PRR16Q569H4 304 aa15.82■□□□□ 0.12
COL6A2-201ENST00000300527 ZDHHC24Q6UX98 284 aa15.82■□□□□ 0.12
COL6A2-201ENST00000300527 TBC1D22AQ8WUA7 517 aa15.82■□□□□ 0.12
COL6A2-201ENST00000300527 TMEM237Q96Q45 408 aa15.82■□□□□ 0.12
COL6A2-201ENST00000300527 AFF2P51816 1311 aa15.82■□□□□ 0.12
COL6A2-201ENST00000300527 RPTORQ8N122 1335 aa15.82■□□□□ 0.12
COL6A2-201ENST00000300527 CES2O00748 559 aa15.82■□□□□ 0.12
COL6A2-201ENST00000300527 TBCAO75347 108 aaKnown RBP15.82■□□□□ 0.12
COL6A2-201ENST00000300527 AGTP01019 485 aa15.82■□□□□ 0.12
COL6A2-201ENST00000300527 BTDP43251 543 aa15.82■□□□□ 0.12
COL6A2-201ENST00000300527 IRX1P78414 480 aaPredicted RBP15.82■□□□□ 0.12
COL6A2-201ENST00000300527 AUHQ13825 339 aaKnown RBP15.82■□□□□ 0.12
COL6A2-201ENST00000300527 PDIA5Q14554 519 aa15.82■□□□□ 0.12
COL6A2-201ENST00000300527 CAPN12Q6ZSI9 719 aa15.82■□□□□ 0.12
COL6A2-201ENST00000300527 SPATA21Q7Z572 469 aa15.82■□□□□ 0.12
COL6A2-201ENST00000300527 EXOC3L1Q86VI1 746 aa15.82■□□□□ 0.12
COL6A2-201ENST00000300527 RASGEF1CQ8N431 466 aa15.82■□□□□ 0.12
COL6A2-201ENST00000300527 RFFLQ8WZ73 363 aa15.82■□□□□ 0.12
COL6A2-201ENST00000300527 RMDN2Q96LZ7 410 aa15.82■□□□□ 0.12
COL6A2-201ENST00000300527 PWWP2AQ96N64 755 aa15.82■□□□□ 0.12
COL6A2-201ENST00000300527 NAP1L3Q99457 506 aaPredicted RBP15.82■□□□□ 0.12
COL6A2-201ENST00000300527 KCNG1Q9UIX4 513 aa15.82■□□□□ 0.12
COL6A2-201ENST00000300527 STXBP5LQ9Y2K9 1186 aa15.82■□□□□ 0.12
COL6A2-201ENST00000300527 KIF13AQ9H1H9 1805 aa15.82■□□□□ 0.12
COL6A2-201ENST00000300527 HIP1RO75146 1068 aa15.81■□□□□ 0.12
COL6A2-201ENST00000300527 KNOP1Q1ED39 458 aaKnown RBP15.81■□□□□ 0.12
COL6A2-201ENST00000300527 SAMD1Q6SPF0 538 aaPredicted RBP15.81■□□□□ 0.12
COL6A2-201ENST00000300527 BRINP3Q76B58 766 aa15.81■□□□□ 0.12
COL6A2-201ENST00000300527 PHLDB2Q86SQ0 1253 aa15.81■□□□□ 0.12
COL6A2-201ENST00000300527 SRRM1Q8IYB3 904 aaKnown RBP15.81■□□□□ 0.12
COL6A2-201ENST00000300527 REEP2Q9BRK0 252 aa15.81■□□□□ 0.12
COL6A2-201ENST00000300527 NT5C3AQ9H0P0 336 aa15.81■□□□□ 0.12
COL6A2-201ENST00000300527 ALG6Q9Y672 507 aa15.81■□□□□ 0.12
COL6A2-201ENST00000300527 GSTTP1A0A1W2PQM5 241 aa15.81■□□□□ 0.12
COL6A2-201ENST00000300527 SPOPO43791 374 aa15.81■□□□□ 0.12
COL6A2-201ENST00000300527 FERP16591 822 aa15.81■□□□□ 0.12
COL6A2-201ENST00000300527 AP1ARQ63HQ0 302 aa15.81■□□□□ 0.12
COL6A2-201ENST00000300527 NSMFQ6X4W1 530 aa15.81■□□□□ 0.12
COL6A2-201ENST00000300527 INTS8Q75QN2 995 aaKnown RBP15.81■□□□□ 0.12
COL6A2-201ENST00000300527 FITM2Q8N6M3 262 aa15.81■□□□□ 0.12
COL6A2-201ENST00000300527 CCHCR1Q8TD31 782 aa15.81■□□□□ 0.12
COL6A2-201ENST00000300527 C1orf54Q8WWF1 131 aa15.81■□□□□ 0.12
COL6A2-201ENST00000300527 PGM2Q96G03 612 aa15.81■□□□□ 0.12
COL6A2-201ENST00000300527 L3MBTL3Q96JM7 780 aaPredicted RBP15.81■□□□□ 0.12
COL6A2-201ENST00000300527 TGS1Q96RS0 853 aaKnown RBP15.81■□□□□ 0.12
COL6A2-201ENST00000300527 COL5A2P05997 1499 aaPredicted RBP15.81■□□□□ 0.12
COL6A2-201ENST00000300527 DDX3YO15523 660 aaKnown RBP15.81■□□□□ 0.12
COL6A2-201ENST00000300527 CALUO43852 315 aaPredicted RBP15.81■□□□□ 0.12
COL6A2-201ENST00000300527 EDIL3O43854 480 aa15.81■□□□□ 0.12
COL6A2-201ENST00000300527 SLURP2P0DP57 97 aa15.81■□□□□ 0.12
COL6A2-201ENST00000300527 ITPK1Q13572 414 aa15.81■□□□□ 0.12
COL6A2-201ENST00000300527 CTTNQ14247 550 aaKnown RBP15.81■□□□□ 0.12
COL6A2-201ENST00000300527 ZNF483Q8TF39 744 aaPredicted RBP15.81■□□□□ 0.12
COL6A2-201ENST00000300527 CENPTQ96BT3 561 aa15.81■□□□□ 0.12
COL6A2-201ENST00000300527 FAM118BQ9BPY3 351 aa15.81■□□□□ 0.12
COL6A2-201ENST00000300527 TAOK3Q9H2K8 898 aa15.81■□□□□ 0.12
COL6A2-201ENST00000300527 DHX36Q9H2U1 1008 aaKnown RBP15.81■□□□□ 0.12
COL6A2-201ENST00000300527 PSTPIP2Q9H939 334 aa15.81■□□□□ 0.12
COL6A2-201ENST00000300527 KLHL14Q9P2G3 628 aa15.81■□□□□ 0.12
COL6A2-201ENST00000300527 ZNF652Q9Y2D9 606 aa15.81■□□□□ 0.12
COL6A2-201ENST00000300527 SLIT2O94813 1529 aa15.8■□□□□ 0.12
COL6A2-201ENST00000300527 RIPK2O43353 540 aa15.8■□□□□ 0.12
COL6A2-201ENST00000300527 BRAFP15056 766 aa15.8■□□□□ 0.12
COL6A2-201ENST00000300527 EPHA7Q15375 998 aa15.8■□□□□ 0.12
COL6A2-201ENST00000300527 SEL1L2Q5TEA6 688 aa15.8■□□□□ 0.12
COL6A2-201ENST00000300527 TTC27Q6P3X3 843 aa15.8■□□□□ 0.12
COL6A2-201ENST00000300527 STMN4Q9H169 189 aaPredicted RBP15.8■□□□□ 0.12
COL6A2-201ENST00000300527 ZNF287Q9HBT7 754 aa15.8■□□□□ 0.12
COL6A2-201ENST00000300527 LOC102724428A0A0B4J2F2 783 aa15.8■□□□□ 0.12
COL6A2-201ENST00000300527 CHMP2AO43633 222 aa15.8■□□□□ 0.12
COL6A2-201ENST00000300527 CCND1P24385 295 aa15.8■□□□□ 0.12
COL6A2-201ENST00000300527 SIK1P57059 783 aa15.8■□□□□ 0.12
COL6A2-201ENST00000300527 POU5F1Q01860 360 aaKnown RBP15.8■□□□□ 0.12
COL6A2-201ENST00000300527 ZC2HC1CQ53FD0 456 aaPredicted RBP15.8■□□□□ 0.12
COL6A2-201ENST00000300527 ARSHQ5FYA8 562 aa15.8■□□□□ 0.12
COL6A2-201ENST00000300527 DPP8Q6V1X1 898 aaPredicted RBP15.8■□□□□ 0.12
COL6A2-201ENST00000300527 SLC20A1Q8WUM9 679 aa15.8■□□□□ 0.12
COL6A2-201ENST00000300527 BHMT2Q9H2M3 363 aa15.8■□□□□ 0.12
COL6A2-201ENST00000300527 ADAM22Q9P0K1 906 aa15.8■□□□□ 0.12
COL6A2-201ENST00000300527 USP17L10C9JJH3 530 aa15.8■□□□□ 0.12
COL6A2-201ENST00000300527 TAL1P17542 331 aaPredicted RBP15.8■□□□□ 0.12
COL6A2-201ENST00000300527 RAD23BP54727 409 aa15.8■□□□□ 0.12
COL6A2-201ENST00000300527 ZNF268Q14587 947 aaPredicted RBP15.8■□□□□ 0.12
COL6A2-201ENST00000300527 TBC1D10BQ4KMP7 808 aaPredicted RBP15.8■□□□□ 0.12
COL6A2-201ENST00000300527 HP1BP3Q5SSJ5 553 aaPredicted RBP15.8■□□□□ 0.12
COL6A2-201ENST00000300527 CRELD2Q6UXH1 353 aaPredicted RBP15.8■□□□□ 0.12
COL6A2-201ENST00000300527 FAM186BQ8IYM0 893 aa15.8■□□□□ 0.12
COL6A2-201ENST00000300527 PIGOQ8TEQ8 1089 aa15.8■□□□□ 0.12
COL6A2-201ENST00000300527 BATF3Q9NR55 127 aa15.8■□□□□ 0.12
COL6A2-201ENST00000300527 COG5Q9UP83 839 aa15.8■□□□□ 0.12
COL6A2-201ENST00000300527 MYH1P12882 1939 aa15.79■□□□□ 0.12
COL6A2-201ENST00000300527 MYH4Q9Y623 1939 aa15.79■□□□□ 0.12
COL6A2-201ENST00000300527 NUDT17P0C025 328 aa15.79■□□□□ 0.12
COL6A2-201ENST00000300527 DLATP10515 647 aaKnown RBP15.79■□□□□ 0.12
COL6A2-201ENST00000300527 TARSP26639 723 aaKnown RBP15.79■□□□□ 0.12
COL6A2-201ENST00000300527 NMT1P30419 496 aaKnown RBP15.79■□□□□ 0.12
COL6A2-201ENST00000300527 ERFP50548 548 aa15.79■□□□□ 0.12
COL6A2-201ENST00000300527 COG2Q14746 738 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms