RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 FGFR4P22455 802 aa15.81■□□□□ 0.12
SCN3B-201ENST00000299333 ICA1Q05084 483 aa15.81■□□□□ 0.12
SCN3B-201ENST00000299333 POU5F1BQ06416 359 aa15.81■□□□□ 0.12
SCN3B-201ENST00000299333 PDIA2Q13087 525 aaKnown RBP15.81■□□□□ 0.12
SCN3B-201ENST00000299333 SMAD1Q15797 465 aaKnown RBP15.81■□□□□ 0.12
SCN3B-201ENST00000299333 CERKLQ49MI3 558 aaPredicted RBP15.81■□□□□ 0.12
SCN3B-201ENST00000299333 CDR2LQ86X02 465 aaPredicted RBP15.81■□□□□ 0.12
SCN3B-201ENST00000299333 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.81■□□□□ 0.12
SCN3B-201ENST00000299333 CNOT8Q9UFF9 292 aaKnown RBP15.81■□□□□ 0.12
SCN3B-201ENST00000299333 SUGT1Q9Y2Z0 365 aa15.81■□□□□ 0.12
SCN3B-201ENST00000299333 KIAA0232Q92628 1395 aa15.81■□□□□ 0.12
SCN3B-201ENST00000299333 LGALS16A8MUM7 142 aa15.81■□□□□ 0.12
SCN3B-201ENST00000299333 ESRRBO95718 433 aa15.81■□□□□ 0.12
SCN3B-201ENST00000299333 KRT39Q6A163 491 aa15.81■□□□□ 0.12
SCN3B-201ENST00000299333 ERICH1Q86X53 443 aa15.81■□□□□ 0.12
SCN3B-201ENST00000299333 ASZ1Q8WWH4 475 aa15.81■□□□□ 0.12
SCN3B-201ENST00000299333 DNAJC12Q9UKB3 198 aa15.81■□□□□ 0.12
SCN3B-201ENST00000299333 SNX2O60749 519 aa15.81■□□□□ 0.12
SCN3B-201ENST00000299333 CCND1P24385 295 aa15.81■□□□□ 0.12
SCN3B-201ENST00000299333 NCAPHQ15003 741 aa15.81■□□□□ 0.12
SCN3B-201ENST00000299333 ZBTB33Q86T24 672 aa15.81■□□□□ 0.12
SCN3B-201ENST00000299333 HEXIM2Q96MH2 286 aaKnown RBP15.81■□□□□ 0.12
SCN3B-201ENST00000299333 FAM193BQ96PV7 902 aaPredicted RBP15.81■□□□□ 0.12
SCN3B-201ENST00000299333 TEX12Q9BXU0 123 aa15.81■□□□□ 0.12
SCN3B-201ENST00000299333 CDV3Q9UKY7 258 aaKnown RBP15.81■□□□□ 0.12
SCN3B-201ENST00000299333 ABCC10Q5T3U5 1492 aa15.8■□□□□ 0.12
SCN3B-201ENST00000299333 ZBTB24O43167 697 aaPredicted RBP15.8■□□□□ 0.12
SCN3B-201ENST00000299333 CASP1P29466 404 aa15.8■□□□□ 0.12
SCN3B-201ENST00000299333 S100A5P33763 92 aa15.8■□□□□ 0.12
SCN3B-201ENST00000299333 MTBPQ96DY7 904 aa15.8■□□□□ 0.12
SCN3B-201ENST00000299333 ASPSCR1Q9BZE9 553 aa15.8■□□□□ 0.12
SCN3B-201ENST00000299333 POLD4Q9HCU8 107 aa15.8■□□□□ 0.12
SCN3B-201ENST00000299333 TSPAN9O75954 239 aa15.8■□□□□ 0.12
SCN3B-201ENST00000299333 TFDP1Q14186 410 aa15.8■□□□□ 0.12
SCN3B-201ENST00000299333 CEP78Q5JTW2 689 aa15.8■□□□□ 0.12
SCN3B-201ENST00000299333 RESP18Q5W5W9 173 aa15.8■□□□□ 0.12
SCN3B-201ENST00000299333 WDR24Q96S15 920 aa15.8■□□□□ 0.12
SCN3B-201ENST00000299333 ZFYVE1Q9HBF4 777 aa15.8■□□□□ 0.12
SCN3B-201ENST00000299333 INO80B-WBP1J3KQ70 363 aa15.8■□□□□ 0.12
SCN3B-201ENST00000299333 PAMP19021 973 aa15.8■□□□□ 0.12
SCN3B-201ENST00000299333 KIF2BQ8N4N8 673 aa15.8■□□□□ 0.12
SCN3B-201ENST00000299333 RBM41Q96IZ5 413 aaKnown RBP15.8■□□□□ 0.12
SCN3B-201ENST00000299333 INO80BQ9C086 356 aaPredicted RBP15.8■□□□□ 0.12
SCN3B-201ENST00000299333 C10orf88Q9H8K7 445 aa15.8■□□□□ 0.12
SCN3B-201ENST00000299333 F5H423 210 aaPredicted RBP15.8■□□□□ 0.12
SCN3B-201ENST00000299333 CAND2O75155 1236 aa15.8■□□□□ 0.12
SCN3B-201ENST00000299333 CHN1P15882 459 aa15.8■□□□□ 0.12
SCN3B-201ENST00000299333 PAPOLAP51003 745 aaKnown RBP15.8■□□□□ 0.12
SCN3B-201ENST00000299333 PARVGQ9HBI0 331 aa15.8■□□□□ 0.12
SCN3B-201ENST00000299333 LRRC4Q9HBW1 653 aa15.8■□□□□ 0.12
SCN3B-201ENST00000299333 OLFML3Q9NRN5 406 aa15.8■□□□□ 0.12
SCN3B-201ENST00000299333 PRR23D1E9PI22 279 aaPredicted RBP15.79■□□□□ 0.12
SCN3B-201ENST00000299333 PRR23D2P0DMB1 279 aaPredicted RBP15.79■□□□□ 0.12
SCN3B-201ENST00000299333 HNRNPH1P31943 449 aaKnown RBP15.79■□□□□ 0.12
SCN3B-201ENST00000299333 OSTNP61366 133 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 IMPG1Q17R60 797 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 DEPDC1Q5TB30 811 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 LRRC8BQ6P9F7 803 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 TMC5Q6UXY8 1006 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 INPP5DQ92835 1189 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 CYFIP2Q96F07 1278 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 PPP1R36Q96LQ0 422 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 NACC1Q96RE7 527 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 WWP1Q9H0M0 922 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 CD248Q9HCU0 757 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 BTDP43251 543 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 DMC1Q14565 340 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 UBE3CQ15386 1083 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 GOLPH3LQ9H4A5 285 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 NGRNQ9NPE2 291 aaKnown RBP15.79■□□□□ 0.12
SCN3B-201ENST00000299333 CHMP2BQ9UQN3 213 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 HEY1Q9Y5J3 304 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 TARSL2A2RTX5 802 aaKnown RBP15.79■□□□□ 0.12
SCN3B-201ENST00000299333 FAM160B1Q5W0V3 765 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 SCG3Q8WXD2 468 aaKnown RBP15.79■□□□□ 0.12
SCN3B-201ENST00000299333 RNF25Q96BH1 459 aaPredicted RBP15.79■□□□□ 0.12
SCN3B-201ENST00000299333 ZNF496Q96IT1 587 aaPredicted RBP15.79■□□□□ 0.12
SCN3B-201ENST00000299333 ZFYVE19Q96K21 471 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 LRRC1Q9BTT6 524 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 AMNQ9BXJ7 453 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 SESN1Q9Y6P5 492 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 TYW5A2RUC4 315 aaKnown RBP15.79■□□□□ 0.12
SCN3B-201ENST00000299333 XPO1O14980 1071 aaKnown RBP15.79■□□□□ 0.12
SCN3B-201ENST00000299333 PDE5AO76074 875 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 GPC5P78333 572 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 GPS1Q13098 491 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 MARCH10Q8NA82 808 aaPredicted RBP15.79■□□□□ 0.12
SCN3B-201ENST00000299333 LZICQ8WZA0 190 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 IQCA1LA6NCM1 817 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 ADORA1P30542 326 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 SERPINB1P30740 379 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 CHRNA3P32297 505 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 KIAA0825Q8IV33 1275 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 EXOC8Q8IYI6 725 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 AGGF1Q8N302 714 aaeCLIP15.79■□□□□ 0.12
SCN3B-201ENST00000299333 SLC7A3Q8WY07 619 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 SEC16BQ96JE7 1060 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 PIGSQ96S52 555 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 ADAMTS12P58397 1594 aa15.79■□□□□ 0.12
SCN3B-201ENST00000299333 ABCC2Q92887 1545 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms