RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 PPM1NQ8N819 430 aa16.52■□□□□ 0.23
FNDC1-201ENST00000297267 BTBD6Q96KE9 485 aa16.52■□□□□ 0.23
FNDC1-201ENST00000297267 IL25Q9H293 177 aa16.52■□□□□ 0.23
FNDC1-201ENST00000297267 CAPN11Q9UMQ6 739 aa16.52■□□□□ 0.23
FNDC1-201ENST00000297267 NLRP1Q9C000 1473 aa16.52■□□□□ 0.23
FNDC1-201ENST00000297267 ZNF564Q8TBZ8 553 aaPredicted RBP16.52■□□□□ 0.23
FNDC1-201ENST00000297267 INTS2Q9H0H0 1204 aaKnown RBP16.52■□□□□ 0.23
FNDC1-201ENST00000297267 TMEM206Q9H813 350 aa16.52■□□□□ 0.23
FNDC1-201ENST00000297267 FAM217BQ9NTX9 383 aaPredicted RBP16.52■□□□□ 0.23
FNDC1-201ENST00000297267 ADAM22Q9P0K1 906 aa16.52■□□□□ 0.23
FNDC1-201ENST00000297267 NEMP1O14524 444 aa16.51■□□□□ 0.23
FNDC1-201ENST00000297267 CYP26A1O43174 497 aa16.51■□□□□ 0.23
FNDC1-201ENST00000297267 GRAPQ13588 217 aa16.51■□□□□ 0.23
FNDC1-201ENST00000297267 LONRF1Q17RB8 773 aa16.51■□□□□ 0.23
FNDC1-201ENST00000297267 PADI6Q6TGC4 694 aa16.51■□□□□ 0.23
FNDC1-201ENST00000297267 GRAPLQ8TC17 118 aaPredicted RBP16.51■□□□□ 0.23
FNDC1-201ENST00000297267 WRNIP1Q96S55 665 aa16.51■□□□□ 0.23
FNDC1-201ENST00000297267 ZNF699Q32M78 642 aa16.51■□□□□ 0.23
FNDC1-201ENST00000297267 ZNF568Q3ZCX4 644 aa16.51■□□□□ 0.23
FNDC1-201ENST00000297267 KLHL8Q9P2G9 620 aaPredicted RBP16.51■□□□□ 0.23
FNDC1-201ENST00000297267 SUGT1Q9Y2Z0 365 aa16.51■□□□□ 0.23
FNDC1-201ENST00000297267 NOC2LQ9Y3T9 749 aaKnown RBP16.51■□□□□ 0.23
FNDC1-201ENST00000297267 ATP9BO43861 1147 aa16.51■□□□□ 0.23
FNDC1-201ENST00000297267 HMBSP08397 361 aa16.51■□□□□ 0.23
FNDC1-201ENST00000297267 RGS7P49802 495 aa16.51■□□□□ 0.23
FNDC1-201ENST00000297267 FOXO4P98177 505 aa16.51■□□□□ 0.23
FNDC1-201ENST00000297267 RWDD2BP57060 319 aa16.51■□□□□ 0.23
FNDC1-201ENST00000297267 KRT33BQ14525 404 aa16.51■□□□□ 0.23
FNDC1-201ENST00000297267 PFKFB3Q16875 520 aaPredicted RBP16.51■□□□□ 0.23
FNDC1-201ENST00000297267 FBXW10Q5XX13 1052 aa16.51■□□□□ 0.23
FNDC1-201ENST00000297267 CCNYL1Q8N7R7 359 aa16.51■□□□□ 0.23
FNDC1-201ENST00000297267 AGPAT5Q9NUQ2 364 aa16.51■□□□□ 0.23
FNDC1-201ENST00000297267 ADAM21Q9UKJ8 722 aa16.51■□□□□ 0.23
FNDC1-201ENST00000297267 EFCAB13Q8IY85 973 aa16.51■□□□□ 0.23
FNDC1-201ENST00000297267 POLR3FQ9H1D9 316 aaPredicted RBP16.51■□□□□ 0.23
FNDC1-201ENST00000297267 ZFP69BQ9UJL9 534 aa16.51■□□□□ 0.23
FNDC1-201ENST00000297267 MED7O43513 233 aa16.5■□□□□ 0.23
FNDC1-201ENST00000297267 DTX3LQ8TDB6 740 aa16.5■□□□□ 0.23
FNDC1-201ENST00000297267 HAUS2Q9NVX0 235 aa16.5■□□□□ 0.23
FNDC1-201ENST00000297267 PDIA2Q13087 525 aaKnown RBP16.5■□□□□ 0.23
FNDC1-201ENST00000297267 RNF139Q8WU17 664 aa16.5■□□□□ 0.23
FNDC1-201ENST00000297267 TGS1Q96RS0 853 aaKnown RBP16.5■□□□□ 0.23
FNDC1-201ENST00000297267 BSDC1Q9NW68 430 aaPredicted RBP16.5■□□□□ 0.23
FNDC1-201ENST00000297267 MARCOQ9UEW3 520 aaPredicted RBP16.5■□□□□ 0.23
FNDC1-201ENST00000297267 EIF3CLB5ME19 914 aaKnown RBP16.5■□□□□ 0.23
FNDC1-201ENST00000297267 EVI5O60447 810 aa16.5■□□□□ 0.23
FNDC1-201ENST00000297267 PRELPP51888 382 aa16.5■□□□□ 0.23
FNDC1-201ENST00000297267 EIF3CQ99613 913 aaKnown RBP16.5■□□□□ 0.23
FNDC1-201ENST00000297267 SPZ1Q9BXG8 430 aa16.5■□□□□ 0.23
FNDC1-201ENST00000297267 SEZ6Q53EL9 994 aa16.5■□□□□ 0.23
FNDC1-201ENST00000297267 SLC5A4Q9NY91 659 aa16.5■□□□□ 0.23
FNDC1-201ENST00000297267 EFCAB6Q5THR3 1501 aa16.49■□□□□ 0.23
FNDC1-201ENST00000297267 GNA15P30679 374 aa16.49■□□□□ 0.23
FNDC1-201ENST00000297267 GPC3P51654 580 aa16.49■□□□□ 0.23
FNDC1-201ENST00000297267 GRIN1Q05586 938 aa16.49■□□□□ 0.23
FNDC1-201ENST00000297267 MYO1EQ12965 1108 aa16.49■□□□□ 0.23
FNDC1-201ENST00000297267 FRA10AC1Q70Z53 315 aa16.49■□□□□ 0.23
FNDC1-201ENST00000297267 BBOF1Q8ND07 529 aa16.49■□□□□ 0.23
FNDC1-201ENST00000297267 A6NNZ2 444 aa16.49■□□□□ 0.23
FNDC1-201ENST00000297267 TUBB8Q3ZCM7 444 aa16.49■□□□□ 0.23
FNDC1-201ENST00000297267 C2CD6Q53TS8 623 aa16.49■□□□□ 0.23
FNDC1-201ENST00000297267 CC2D2BQ6DHV5 1058 aa16.49■□□□□ 0.23
FNDC1-201ENST00000297267 EIF2AK1Q9BQI3 630 aaKnown RBP16.49■□□□□ 0.23
FNDC1-201ENST00000297267 ZNF233A6NK53 670 aa16.49■□□□□ 0.23
FNDC1-201ENST00000297267 NPR1P16066 1061 aa16.49■□□□□ 0.23
FNDC1-201ENST00000297267 ACOT2P49753 483 aa16.49■□□□□ 0.23
FNDC1-201ENST00000297267 VAMP7P51809 220 aa16.49■□□□□ 0.23
FNDC1-201ENST00000297267 ZC2HC1CQ53FD0 456 aaPredicted RBP16.49■□□□□ 0.23
FNDC1-201ENST00000297267 CENPUQ71F23 418 aa16.49■□□□□ 0.23
FNDC1-201ENST00000297267 PI4K2AQ9BTU6 479 aa16.49■□□□□ 0.23
FNDC1-201ENST00000297267 Q9H521 79 aa16.49■□□□□ 0.23
FNDC1-201ENST00000297267 GYG2O15488 501 aa16.49■□□□□ 0.23
FNDC1-201ENST00000297267 PTPREP23469 700 aa16.49■□□□□ 0.23
FNDC1-201ENST00000297267 COBLL1Q53SF7 1204 aa16.49■□□□□ 0.23
FNDC1-201ENST00000297267 OTULINQ96BN8 352 aa16.49■□□□□ 0.23
FNDC1-201ENST00000297267 TTC1Q99614 292 aa16.49■□□□□ 0.23
FNDC1-201ENST00000297267 STRIP2Q9ULQ0 834 aa16.49■□□□□ 0.23
FNDC1-201ENST00000297267 UBE4BO95155 1302 aa16.49■□□□□ 0.23
FNDC1-201ENST00000297267 COPEO14579 308 aa16.49■□□□□ 0.23
FNDC1-201ENST00000297267 FOSP01100 380 aaPredicted RBP16.49■□□□□ 0.23
FNDC1-201ENST00000297267 OTUD5Q96G74 571 aa16.49■□□□□ 0.23
FNDC1-201ENST00000297267 ADA2Q9NZK5 511 aa16.49■□□□□ 0.23
FNDC1-201ENST00000297267 SEPT12Q8IYM1 358 aa16.48■□□□□ 0.23
FNDC1-201ENST00000297267 TMEM143Q96AN5 459 aa16.48■□□□□ 0.23
FNDC1-201ENST00000297267 LXNQ9BS40 222 aa16.48■□□□□ 0.23
FNDC1-201ENST00000297267 V9GYQ6 96 aa16.48■□□□□ 0.23
FNDC1-201ENST00000297267 EMSYQ7Z589 1322 aa16.48■□□□□ 0.23
FNDC1-201ENST00000297267 POLRMTO00411 1230 aaKnown RBP16.48■□□□□ 0.23
FNDC1-201ENST00000297267 STK25O00506 426 aa16.48■□□□□ 0.23
FNDC1-201ENST00000297267 CLDN3O15551 220 aa16.48■□□□□ 0.23
FNDC1-201ENST00000297267 IRF1P10914 325 aa16.48■□□□□ 0.23
FNDC1-201ENST00000297267 AKR1B1P15121 316 aa16.48■□□□□ 0.23
FNDC1-201ENST00000297267 SMTNL2Q2TAL5 461 aa16.48■□□□□ 0.23
FNDC1-201ENST00000297267 ANKRD20A4Q4UJ75 823 aa16.48■□□□□ 0.23
FNDC1-201ENST00000297267 ANKRD20A8PQ5CZ79 823 aa16.48■□□□□ 0.23
FNDC1-201ENST00000297267 ANKRD20A2Q5SQ80 823 aa16.48■□□□□ 0.23
FNDC1-201ENST00000297267 ANKRD20A1Q5TYW2 823 aa16.48■□□□□ 0.23
FNDC1-201ENST00000297267 CATSPER4Q7RTX7 472 aa16.48■□□□□ 0.23
FNDC1-201ENST00000297267 METTL16Q86W50 562 aaKnown RBP16.48■□□□□ 0.23
FNDC1-201ENST00000297267 NUDCD1Q96RS6 583 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms