RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 MINDY3Q9H8M7 445 aa9.94□□□□□ -0.82
TFF1-201ENST00000291527 BMP2KQ9NSY1 1161 aaPredicted RBP9.94□□□□□ -0.82
TFF1-201ENST00000291527 SEPT9Q9UHD8 586 aaPredicted RBP9.94□□□□□ -0.82
TFF1-201ENST00000291527 PCDHA4Q9UN74 947 aa9.94□□□□□ -0.82
TFF1-201ENST00000291527 RBM19Q9Y4C8 960 aaKnown RBP9.94□□□□□ -0.82
TFF1-201ENST00000291527 CYP3A7-CYP3A51PA0A087WV96 503 aa9.93□□□□□ -0.82
TFF1-201ENST00000291527 CCDC196A0A1B0GTZ2 297 aa9.93□□□□□ -0.82
TFF1-201ENST00000291527 C2orf71A6NGG8 1288 aa9.93□□□□□ -0.82
TFF1-201ENST00000291527 DDX11L8A8MPP1 907 aa9.93□□□□□ -0.82
TFF1-201ENST00000291527 MAGEB2O15479 319 aa9.93□□□□□ -0.82
TFF1-201ENST00000291527 CLASP2O75122 1294 aaKnown RBP9.93□□□□□ -0.82
TFF1-201ENST00000291527 CTDNEP1O95476 244 aa9.93□□□□□ -0.82
TFF1-201ENST00000291527 RPLP2P05387 115 aaKnown RBP9.93□□□□□ -0.82
TFF1-201ENST00000291527 CYP3A7P24462 503 aa9.93□□□□□ -0.82
TFF1-201ENST00000291527 GNA11P29992 359 aa9.93□□□□□ -0.82
TFF1-201ENST00000291527 MRE11P49959 708 aa9.93□□□□□ -0.82
TFF1-201ENST00000291527 USP11P51784 963 aa9.93□□□□□ -0.82
TFF1-201ENST00000291527 BCAR1P56945 870 aa9.93□□□□□ -0.82
TFF1-201ENST00000291527 PLCB3Q01970 1234 aa9.93□□□□□ -0.82
TFF1-201ENST00000291527 INF2Q27J81 1249 aa9.93□□□□□ -0.82
TFF1-201ENST00000291527 Q4G0T1 1027 aa9.93□□□□□ -0.82
TFF1-201ENST00000291527 TRIM67Q6ZTA4 783 aa9.93□□□□□ -0.82
TFF1-201ENST00000291527 MIER3Q7Z3K6 550 aa9.93□□□□□ -0.82
TFF1-201ENST00000291527 ZNF280BQ86YH2 543 aa9.93□□□□□ -0.82
TFF1-201ENST00000291527 BLIDQ8IZY5 108 aa9.93□□□□□ -0.82
TFF1-201ENST00000291527 SLC39A11Q8N1S5 342 aa9.93□□□□□ -0.82
TFF1-201ENST00000291527 NLRP7Q8WX94 980 aa9.93□□□□□ -0.82
TFF1-201ENST00000291527 TNPO1Q92973 898 aaKnown RBP9.93□□□□□ -0.82
TFF1-201ENST00000291527 ASIC4Q96FT7 647 aa9.93□□□□□ -0.82
TFF1-201ENST00000291527 PHF7Q9BWX1 381 aaPredicted RBP9.93□□□□□ -0.82
TFF1-201ENST00000291527 TEKT3Q9BXF9 490 aa9.93□□□□□ -0.82
TFF1-201ENST00000291527 NIFKQ9BYG3 293 aaKnown RBP9.93□□□□□ -0.82
TFF1-201ENST00000291527 NRDE2Q9H7Z3 1164 aa9.93□□□□□ -0.82
TFF1-201ENST00000291527 AAASQ9NRG9 546 aa9.93□□□□□ -0.82
TFF1-201ENST00000291527 NRBP2Q9NSY0 501 aa9.93□□□□□ -0.82
TFF1-201ENST00000291527 DNAJB4Q9UDY4 337 aa9.93□□□□□ -0.82
TFF1-201ENST00000291527 VAV3Q9UKW4 847 aa9.93□□□□□ -0.82
TFF1-201ENST00000291527 FAM50BQ9Y247 325 aa9.93□□□□□ -0.82
TFF1-201ENST00000291527 SPTBN4Q9H254 2564 aa9.92□□□□□ -0.82
TFF1-201ENST00000291527 TRIP11Q15643 1979 aa9.92□□□□□ -0.82
TFF1-201ENST00000291527 DENND4AQ7Z401 1863 aa9.92□□□□□ -0.82
TFF1-201ENST00000291527 A0A0U1RQF3 1178 aa9.92□□□□□ -0.82
TFF1-201ENST00000291527 F8W810 466 aa9.92□□□□□ -0.82
TFF1-201ENST00000291527 LARGE1O95461 756 aa9.92□□□□□ -0.82
TFF1-201ENST00000291527 EPCAMP16422 314 aa9.92□□□□□ -0.82
TFF1-201ENST00000291527 LAG3P18627 525 aa9.92□□□□□ -0.82
TFF1-201ENST00000291527 PHKA2P46019 1235 aa9.92□□□□□ -0.82
TFF1-201ENST00000291527 AKAP17AQ02040 695 aaKnown RBP9.92□□□□□ -0.82
TFF1-201ENST00000291527 UBE3AQ05086 875 aa9.92□□□□□ -0.82
TFF1-201ENST00000291527 SSRP1Q08945 709 aaKnown RBP9.92□□□□□ -0.82
TFF1-201ENST00000291527 TBC1D8BQ0IIM8 1120 aa9.92□□□□□ -0.82
TFF1-201ENST00000291527 SCRN1Q12765 414 aa9.92□□□□□ -0.82
TFF1-201ENST00000291527 TCF15Q12870 199 aa9.92□□□□□ -0.82
TFF1-201ENST00000291527 UBXN11Q5T124 520 aa9.92□□□□□ -0.82
TFF1-201ENST00000291527 TMEM184AQ6ZMB5 413 aa9.92□□□□□ -0.82
TFF1-201ENST00000291527 TAS1R1Q7RTX1 841 aa9.92□□□□□ -0.82
TFF1-201ENST00000291527 TMC7Q7Z402 723 aa9.92□□□□□ -0.82
TFF1-201ENST00000291527 RHPN2Q8IUC4 686 aa9.92□□□□□ -0.82
TFF1-201ENST00000291527 TEX2Q8IWB9 1127 aa9.92□□□□□ -0.82
TFF1-201ENST00000291527 HAS1Q92839 578 aa9.92□□□□□ -0.82
TFF1-201ENST00000291527 TMEM143Q96AN5 459 aa9.92□□□□□ -0.82
TFF1-201ENST00000291527 ZNF558Q96NG5 402 aa9.92□□□□□ -0.82
TFF1-201ENST00000291527 RIT2Q99578 217 aa9.92□□□□□ -0.82
TFF1-201ENST00000291527 POMKQ9H5K3 350 aa9.92□□□□□ -0.82
TFF1-201ENST00000291527 IFT122Q9HBG6 1241 aa9.92□□□□□ -0.82
TFF1-201ENST00000291527 ENTPD7Q9NQZ7 604 aa9.92□□□□□ -0.82
TFF1-201ENST00000291527 FAM86C1Q9NVL1 165 aa9.92□□□□□ -0.82
TFF1-201ENST00000291527 RGL1Q9NZL6 768 aa9.92□□□□□ -0.82
TFF1-201ENST00000291527 SUCLA2Q9P2R7 463 aaPredicted RBP9.92□□□□□ -0.82
TFF1-201ENST00000291527 DOCK8Q8NF50 2099 aa9.92□□□□□ -0.82
TFF1-201ENST00000291527 DCHS1Q96JQ0 3298 aa9.92□□□□□ -0.82
TFF1-201ENST00000291527 TDRD15B5MCY1 1934 aaKnown RBP9.92□□□□□ -0.82
TFF1-201ENST00000291527 C2CD4DB7Z1M9 353 aa9.91□□□□□ -0.82
TFF1-201ENST00000291527 OFD1O75665 1012 aa9.91□□□□□ -0.82
TFF1-201ENST00000291527 DDHD2O94830 711 aa9.91□□□□□ -0.82
TFF1-201ENST00000291527 CXCL14O95715 111 aa9.91□□□□□ -0.82
TFF1-201ENST00000291527 MYBP10242 640 aa9.91□□□□□ -0.82
TFF1-201ENST00000291527 ZSCAN20P17040 1043 aaPredicted RBP9.91□□□□□ -0.82
TFF1-201ENST00000291527 SLC11A1P49279 550 aa9.91□□□□□ -0.82
TFF1-201ENST00000291527 LETM2Q2VYF4 491 aa9.91□□□□□ -0.82
TFF1-201ENST00000291527 AGMOQ6ZNB7 445 aa9.91□□□□□ -0.82
TFF1-201ENST00000291527 MRPL43Q8N983 215 aaKnown RBP9.91□□□□□ -0.82
TFF1-201ENST00000291527 BICD2Q8TD16 824 aa9.91□□□□□ -0.82
TFF1-201ENST00000291527 CCDC12Q8WUD4 166 aaPredicted RBP9.91□□□□□ -0.82
TFF1-201ENST00000291527 PBXIP1Q96AQ6 731 aa9.91□□□□□ -0.82
TFF1-201ENST00000291527 FAM167AQ96KS9 214 aa9.91□□□□□ -0.82
TFF1-201ENST00000291527 NLRP4Q96MN2 994 aa9.91□□□□□ -0.82
TFF1-201ENST00000291527 MAP7D2Q96T17 732 aa9.91□□□□□ -0.82
TFF1-201ENST00000291527 PHF20Q9BVI0 1012 aa9.91□□□□□ -0.82
TFF1-201ENST00000291527 RNF39Q9H2S5 420 aa9.91□□□□□ -0.82
TFF1-201ENST00000291527 SH3GLB2Q9NR46 395 aa9.91□□□□□ -0.82
TFF1-201ENST00000291527 MIOSQ9NXC5 875 aa9.91□□□□□ -0.82
TFF1-201ENST00000291527 SPG21Q9NZD8 308 aa9.91□□□□□ -0.82
TFF1-201ENST00000291527 TPCN1Q9ULQ1 816 aa9.91□□□□□ -0.82
TFF1-201ENST00000291527 CEP131Q9UPN4 1083 aa9.91□□□□□ -0.82
TFF1-201ENST00000291527 LZTS1Q9Y250 596 aa9.91□□□□□ -0.82
TFF1-201ENST00000291527 INPP5FQ9Y2H2 1132 aa9.91□□□□□ -0.82
TFF1-201ENST00000291527 HCFC2Q9Y5Z7 792 aa9.91□□□□□ -0.82
TFF1-201ENST00000291527 MTCL1Q9Y4B5 1905 aaKnown RBP9.9□□□□□ -0.82
TFF1-201ENST00000291527 RIF1Q5UIP0 2472 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms