RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 PSMD2Q13200 908 aa24.08■■□□□ 1.45
PDLIM3-203ENST00000284771 SASS6Q6UVJ0 657 aa24.08■■□□□ 1.45
PDLIM3-203ENST00000284771 FAM178BQ8IXR5 827 aa24.08■■□□□ 1.45
PDLIM3-203ENST00000284771 MRPL44Q9H9J2 332 aaKnown RBP24.08■■□□□ 1.45
PDLIM3-203ENST00000284771 SEL1LQ9UBV2 794 aa24.08■■□□□ 1.45
PDLIM3-203ENST00000284771 MAPK8IP1Q9UQF2 711 aa24.08■■□□□ 1.45
PDLIM3-203ENST00000284771 AKT3Q9Y243 479 aa24.08■■□□□ 1.45
PDLIM3-203ENST00000284771 SLC16A4O15374 487 aa24.08■■□□□ 1.44
PDLIM3-203ENST00000284771 NLRP12P59046 1061 aa24.08■■□□□ 1.44
PDLIM3-203ENST00000284771 TYRO3Q06418 890 aa24.08■■□□□ 1.44
PDLIM3-203ENST00000284771 TMEM62Q0P6H9 643 aa24.08■■□□□ 1.44
PDLIM3-203ENST00000284771 MXD4Q14582 209 aaPredicted RBP24.08■■□□□ 1.44
PDLIM3-203ENST00000284771 ZC2HC1CQ53FD0 456 aaPredicted RBP24.08■■□□□ 1.44
PDLIM3-203ENST00000284771 SPIRE2Q8WWL2 714 aa24.08■■□□□ 1.44
PDLIM3-203ENST00000284771 PPP1R16BQ96T49 567 aa24.08■■□□□ 1.44
PDLIM3-203ENST00000284771 STRA6Q9BX79 667 aa24.08■■□□□ 1.44
PDLIM3-203ENST00000284771 CCDC169A6NNP5 214 aa24.07■■□□□ 1.44
PDLIM3-203ENST00000284771 SRGAP2CP0DJJ0 459 aa24.07■■□□□ 1.44
PDLIM3-203ENST00000284771 MYBP10242 640 aa24.07■■□□□ 1.44
PDLIM3-203ENST00000284771 NCKAP1LP55160 1127 aa24.07■■□□□ 1.44
PDLIM3-203ENST00000284771 KCNA1Q09470 495 aa24.07■■□□□ 1.44
PDLIM3-203ENST00000284771 DMP1Q13316 513 aaPredicted RBP24.07■■□□□ 1.44
PDLIM3-203ENST00000284771 TAF2Q6P1X5 1199 aa24.07■■□□□ 1.44
PDLIM3-203ENST00000284771 FAM126BQ8IXS8 530 aa24.07■■□□□ 1.44
PDLIM3-203ENST00000284771 RNF149Q8NC42 400 aa24.07■■□□□ 1.44
PDLIM3-203ENST00000284771 TMEM161BQ8NDZ6 487 aa24.07■■□□□ 1.44
PDLIM3-203ENST00000284771 DHX38Q92620 1227 aaKnown RBP24.07■■□□□ 1.44
PDLIM3-203ENST00000284771 IFT122Q9HBG6 1241 aa24.07■■□□□ 1.44
PDLIM3-203ENST00000284771 PPP1R3GB7ZBB8 358 aa24.06■■□□□ 1.44
PDLIM3-203ENST00000284771 GPR32O75388 356 aa24.06■■□□□ 1.44
PDLIM3-203ENST00000284771 PPP1R37O75864 691 aa24.06■■□□□ 1.44
PDLIM3-203ENST00000284771 PRCPP42785 496 aa24.06■■□□□ 1.44
PDLIM3-203ENST00000284771 NAMPTP43490 491 aa24.06■■□□□ 1.44
PDLIM3-203ENST00000284771 NLRP11P59045 1033 aaKnown RBP24.06■■□□□ 1.44
PDLIM3-203ENST00000284771 SNX17Q15036 470 aa24.06■■□□□ 1.44
PDLIM3-203ENST00000284771 EPM2AIP1Q7L775 607 aaPredicted RBP24.06■■□□□ 1.44
PDLIM3-203ENST00000284771 UBE2Q1Q7Z7E8 422 aa24.06■■□□□ 1.44
PDLIM3-203ENST00000284771 CCDC47Q96A33 483 aaKnown RBP24.06■■□□□ 1.44
PDLIM3-203ENST00000284771 IFT74Q96LB3 600 aa24.06■■□□□ 1.44
PDLIM3-203ENST00000284771 C11orf49Q9H6J7 331 aa24.06■■□□□ 1.44
PDLIM3-203ENST00000284771 CDHR5Q9HBB8 845 aa24.06■■□□□ 1.44
PDLIM3-203ENST00000284771 KMT5AQ9NQR1 393 aa24.06■■□□□ 1.44
PDLIM3-203ENST00000284771 ARHGAP28Q9P2N2 729 aa24.06■■□□□ 1.44
PDLIM3-203ENST00000284771 ASAP2O43150 1006 aa24.05■■□□□ 1.44
PDLIM3-203ENST00000284771 CD4P01730 458 aa24.05■■□□□ 1.44
PDLIM3-203ENST00000284771 HOXD13P35453 343 aa24.05■■□□□ 1.44
PDLIM3-203ENST00000284771 GPC3P51654 580 aa24.05■■□□□ 1.44
PDLIM3-203ENST00000284771 ZNF445P59923 1031 aa24.05■■□□□ 1.44
PDLIM3-203ENST00000284771 C1orf53Q5VUE5 145 aa24.05■■□□□ 1.44
PDLIM3-203ENST00000284771 HAUS6Q7Z4H7 955 aa24.05■■□□□ 1.44
PDLIM3-203ENST00000284771 SCFD1Q8WVM8 642 aa24.05■■□□□ 1.44
PDLIM3-203ENST00000284771 NLRP4Q96MN2 994 aa24.05■■□□□ 1.44
PDLIM3-203ENST00000284771 MAP7D2Q96T17 732 aa24.05■■□□□ 1.44
PDLIM3-203ENST00000284771 SEZ6LQ9BYH1 1024 aa24.05■■□□□ 1.44
PDLIM3-203ENST00000284771 ADAMTS10Q9H324 1103 aa24.05■■□□□ 1.44
PDLIM3-203ENST00000284771 A0A087WZ62 844 aa24.05■■□□□ 1.44
PDLIM3-203ENST00000284771 LRRIQ4A6NIV6 560 aa24.05■■□□□ 1.44
PDLIM3-203ENST00000284771 MAPTP10636 758 aaKnown RBP24.05■■□□□ 1.44
PDLIM3-203ENST00000284771 CAPN2P17655 700 aa24.05■■□□□ 1.44
PDLIM3-203ENST00000284771 KIZQ2M2Z5 673 aa24.05■■□□□ 1.44
PDLIM3-203ENST00000284771 TRIM71Q2Q1W2 868 aaKnown RBP24.05■■□□□ 1.44
PDLIM3-203ENST00000284771 TAS1R3Q7RTX0 852 aa24.05■■□□□ 1.44
PDLIM3-203ENST00000284771 FDXACB1Q9BRP7 624 aaPredicted RBP24.05■■□□□ 1.44
PDLIM3-203ENST00000284771 ST6GALNAC4Q9H4F1 302 aa24.05■■□□□ 1.44
PDLIM3-203ENST00000284771 K7ENM7 598 aa24.04■■□□□ 1.44
PDLIM3-203ENST00000284771 PRPF6O94906 941 aaKnown RBP24.04■■□□□ 1.44
PDLIM3-203ENST00000284771 GCNT3O95395 438 aa24.04■■□□□ 1.44
PDLIM3-203ENST00000284771 CCDC192P0DO97 292 aa24.04■■□□□ 1.44
PDLIM3-203ENST00000284771 SMTNP53814 917 aa24.04■■□□□ 1.44
PDLIM3-203ENST00000284771 GTF2BQ00403 316 aa24.04■■□□□ 1.44
PDLIM3-203ENST00000284771 PTK7Q13308 1070 aa24.04■■□□□ 1.44
PDLIM3-203ENST00000284771 PPP2R5AQ15172 486 aa24.04■■□□□ 1.44
PDLIM3-203ENST00000284771 LRSAM1Q6UWE0 723 aa24.04■■□□□ 1.44
PDLIM3-203ENST00000284771 C11orf57Q6ZUT1 292 aaPredicted RBP24.04■■□□□ 1.44
PDLIM3-203ENST00000284771 ANKRD33Q7Z3H0 272 aa24.04■■□□□ 1.44
PDLIM3-203ENST00000284771 RPAINQ86UA6 219 aa24.04■■□□□ 1.44
PDLIM3-203ENST00000284771 ADSSL1Q8N142 457 aa24.04■■□□□ 1.44
PDLIM3-203ENST00000284771 IKZF4Q9H2S9 585 aa24.04■■□□□ 1.44
PDLIM3-203ENST00000284771 MINDY3Q9H8M7 445 aa24.04■■□□□ 1.44
PDLIM3-203ENST00000284771 CSDE1O75534 798 aaKnown RBP24.03■■□□□ 1.44
PDLIM3-203ENST00000284771 IQCF3P0C7M6 154 aa24.03■■□□□ 1.44
PDLIM3-203ENST00000284771 CDCA2Q69YH5 1023 aaPredicted RBP24.03■■□□□ 1.44
PDLIM3-203ENST00000284771 NECAB2Q7Z6G3 386 aa24.03■■□□□ 1.44
PDLIM3-203ENST00000284771 NME8Q8N427 588 aa24.03■■□□□ 1.44
PDLIM3-203ENST00000284771 ZNF507Q8TCN5 953 aa24.03■■□□□ 1.44
PDLIM3-203ENST00000284771 MED15Q96RN5 788 aa24.03■■□□□ 1.44
PDLIM3-203ENST00000284771 NOD1Q9Y239 953 aa24.03■■□□□ 1.44
PDLIM3-203ENST00000284771 PQBP1O60828 265 aaKnown RBP24.02■■□□□ 1.44
PDLIM3-203ENST00000284771 PTENP60484 403 aa24.02■■□□□ 1.44
PDLIM3-203ENST00000284771 POU5F1BQ06416 359 aa24.02■■□□□ 1.44
PDLIM3-203ENST00000284771 STX1AQ16623 288 aa24.02■■□□□ 1.44
PDLIM3-203ENST00000284771 LRRC26Q2I0M4 334 aa24.02■■□□□ 1.44
PDLIM3-203ENST00000284771 TRIM60Q495X7 471 aa24.02■■□□□ 1.44
PDLIM3-203ENST00000284771 COBLL1Q53SF7 1204 aa24.02■■□□□ 1.44
PDLIM3-203ENST00000284771 KCNN1Q92952 543 aa24.02■■□□□ 1.44
PDLIM3-203ENST00000284771 DNAJC25Q9H1X3 360 aa24.02■■□□□ 1.44
PDLIM3-203ENST00000284771 ANO10Q9NW15 660 aa24.02■■□□□ 1.44
PDLIM3-203ENST00000284771 DENND3A2RUS2 1198 aa24.02■■□□□ 1.44
PDLIM3-203ENST00000284771 ANO6Q4KMQ2 910 aa24.02■■□□□ 1.44
PDLIM3-203ENST00000284771 MLKLQ8NB16 471 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms