RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 SLC28A3Q9HAS3 691 aa7.25□□□□□ -1.25
CD44-204ENST00000279452 POLD4Q9HCU8 107 aa7.25□□□□□ -1.25
CD44-204ENST00000279452 XPNPEP1Q9NQW7 623 aa7.25□□□□□ -1.25
CD44-204ENST00000279452 CFAP45Q9UL16 551 aa7.25□□□□□ -1.25
CD44-204ENST00000279452 SRPRBQ9Y5M8 271 aaKnown RBP7.25□□□□□ -1.25
CD44-204ENST00000279452 SQORQ9Y6N5 450 aa7.25□□□□□ -1.25
CD44-204ENST00000279452 MKI67P46013 3256 aaKnown RBP7.25□□□□□ -1.25
CD44-204ENST00000279452 SCN5AQ14524 2016 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 CCDC169A6NNP5 214 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 ASAP2O43150 1006 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 HIP1RO75146 1068 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 YEATS4O95619 227 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 BRD1O95696 1058 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 CA3P07451 260 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 PLA2G4BP0C869 781 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 CYP11B2P19099 503 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 GLRA2P23416 452 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 STAT6P42226 847 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 NUCB2P80303 420 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 NCBP1Q09161 790 aaKnown RBP7.24□□□□□ -1.25
CD44-204ENST00000279452 CAPSQ13938 189 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 PAN2Q504Q3 1202 aaKnown RBP7.24□□□□□ -1.25
CD44-204ENST00000279452 RASIP1Q5U651 963 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 RRAGBQ5VZM2 374 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 TWF2Q6IBS0 349 aaKnown RBP7.24□□□□□ -1.25
CD44-204ENST00000279452 Q7L0L9 218 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 KCNK18Q7Z418 384 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 GPBP1Q86WP2 473 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 PDILTQ8N807 584 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 LINC00301Q8NCQ3 95 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 DEPTORQ8TB45 409 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 PHOSPHO2Q8TCD6 241 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 KCNG4Q8TDN1 519 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 EPSTI1Q96J88 318 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 CHAMP1Q96JM3 812 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 IFT74Q96LB3 600 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 SPATA32Q96LK8 384 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 DRC1Q96MC2 740 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 PNMA5Q96PV4 448 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 RUSC1Q9BVN2 902 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 PANK2Q9BZ23 570 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 CERS4Q9HA82 394 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 ERVK-5Q9HDB9 667 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 MTUS1Q9ULD2 1270 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 YBX2Q9Y2T7 364 aaKnown RBP7.24□□□□□ -1.25
CD44-204ENST00000279452 PCDHA11Q9Y5I1 949 aa7.24□□□□□ -1.25
CD44-204ENST00000279452 TNRC18O15417 2968 aaPredicted RBP7.23□□□□□ -1.25
CD44-204ENST00000279452 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.23□□□□□ -1.25
CD44-204ENST00000279452 NPHP3-ACAD11A0A0J9YXS1 232 aa7.23□□□□□ -1.25
CD44-204ENST00000279452 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.23□□□□□ -1.25
CD44-204ENST00000279452 ENPP3O14638 875 aa7.23□□□□□ -1.25
CD44-204ENST00000279452 CUTAO60888 179 aa7.23□□□□□ -1.25
CD44-204ENST00000279452 PPP6R2O75170 966 aa7.23□□□□□ -1.25
CD44-204ENST00000279452 TBCAO75347 108 aaKnown RBP7.23□□□□□ -1.25
CD44-204ENST00000279452 FAM13AO94988 1023 aa7.23□□□□□ -1.25
CD44-204ENST00000279452 GJB5O95377 273 aa7.23□□□□□ -1.25
CD44-204ENST00000279452 STAG3L1P0CL83 205 aa7.23□□□□□ -1.25
CD44-204ENST00000279452 ARL2P36404 184 aa7.23□□□□□ -1.25
CD44-204ENST00000279452 PEX3P56589 373 aa7.23□□□□□ -1.25
CD44-204ENST00000279452 DMP1Q13316 513 aaPredicted RBP7.23□□□□□ -1.25
CD44-204ENST00000279452 MCM6Q14566 821 aa7.23□□□□□ -1.25
CD44-204ENST00000279452 PPP2R5AQ15172 486 aa7.23□□□□□ -1.25
CD44-204ENST00000279452 LONRF3Q496Y0 759 aa7.23□□□□□ -1.25
CD44-204ENST00000279452 TMEM119Q4V9L6 283 aa7.23□□□□□ -1.25
CD44-204ENST00000279452 SPOUT1Q5T280 376 aaKnown RBP7.23□□□□□ -1.25
CD44-204ENST00000279452 ATL3Q6DD88 541 aa7.23□□□□□ -1.25
CD44-204ENST00000279452 CCDC73Q6ZRK6 1079 aa7.23□□□□□ -1.25
CD44-204ENST00000279452 USP49Q70CQ1 688 aa7.23□□□□□ -1.25
CD44-204ENST00000279452 SRGAP1Q7Z6B7 1085 aa7.23□□□□□ -1.25
CD44-204ENST00000279452 ABI1Q8IZP0 508 aa7.23□□□□□ -1.25
CD44-204ENST00000279452 DEFB123Q8N688 67 aa7.23□□□□□ -1.25
CD44-204ENST00000279452 LINC01599Q8WXQ3 324 aa7.23□□□□□ -1.25
CD44-204ENST00000279452 LARP4BQ92615 738 aaKnown RBP7.23□□□□□ -1.25
CD44-204ENST00000279452 RAD54LQ92698 747 aa7.23□□□□□ -1.25
CD44-204ENST00000279452 KIFAP3Q92845 792 aa7.23□□□□□ -1.25
CD44-204ENST00000279452 KIFC3Q9BVG8 833 aa7.23□□□□□ -1.25
CD44-204ENST00000279452 TRIM6Q9C030 488 aaPredicted RBP7.23□□□□□ -1.25
CD44-204ENST00000279452 TMX1Q9H3N1 280 aa7.23□□□□□ -1.25
CD44-204ENST00000279452 C1orf112Q9NSG2 853 aa7.23□□□□□ -1.25
CD44-204ENST00000279452 DACT1Q9NYF0 836 aa7.23□□□□□ -1.25
CD44-204ENST00000279452 FAM13BQ9NYF5 915 aa7.23□□□□□ -1.25
CD44-204ENST00000279452 PCDHB7Q9Y5E2 793 aa7.23□□□□□ -1.25
CD44-204ENST00000279452 SIP14410 1827 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 ARID2Q68CP9 1835 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 LCHNA4D1U4 455 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 GOLGA6L4A6NEF3 574 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 SFI1A8K8P3 1242 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 SLC26A4O43511 780 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 MGEA5O60502 916 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 CSPG5O95196 566 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 NAMPTP43490 491 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 SARSP49591 514 aaKnown RBP7.22□□□□□ -1.25
CD44-204ENST00000279452 MBTD1Q05BQ5 628 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 BTG3Q14201 252 aaPredicted RBP7.22□□□□□ -1.25
CD44-204ENST00000279452 HYIQ5T013 277 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 RINT1Q6NUQ1 792 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 SLC24A5Q71RS6 500 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 DYMQ7RTS9 669 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 NPAS4Q8IUM7 802 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 FIBCD1Q8N539 461 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms