RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 SYNGAP1Q96PV0 1343 aa10.47□□□□□ -0.73
TRIM55-201ENST00000276573 TISP43B9A030 160 aa10.47□□□□□ -0.73
TRIM55-201ENST00000276573 MAPK13O15264 365 aa10.47□□□□□ -0.73
TRIM55-201ENST00000276573 PJA2O43164 708 aa10.47□□□□□ -0.73
TRIM55-201ENST00000276573 KRT13P13646 458 aa10.47□□□□□ -0.73
TRIM55-201ENST00000276573 ATP4AP20648 1035 aa10.47□□□□□ -0.73
TRIM55-201ENST00000276573 COPB2P35606 906 aa10.47□□□□□ -0.73
TRIM55-201ENST00000276573 RTP1P59025 263 aa10.47□□□□□ -0.73
TRIM55-201ENST00000276573 GFPT1Q06210 699 aaPredicted RBP10.47□□□□□ -0.73
TRIM55-201ENST00000276573 KLHL30Q0D2K2 578 aa10.47□□□□□ -0.73
TRIM55-201ENST00000276573 BFSP1Q12934 665 aa10.47□□□□□ -0.73
TRIM55-201ENST00000276573 PDCL2Q8N4E4 241 aa10.47□□□□□ -0.73
TRIM55-201ENST00000276573 XXYLT1Q8NBI6 393 aa10.47□□□□□ -0.73
TRIM55-201ENST00000276573 HVCN1Q96D96 273 aa10.47□□□□□ -0.73
TRIM55-201ENST00000276573 SPAG5Q96R06 1193 aa10.47□□□□□ -0.73
TRIM55-201ENST00000276573 TXNRD2Q9NNW7 524 aa10.47□□□□□ -0.73
TRIM55-201ENST00000276573 KMT5AQ9NQR1 393 aa10.47□□□□□ -0.73
TRIM55-201ENST00000276573 GCNT4Q9P109 453 aa10.47□□□□□ -0.73
TRIM55-201ENST00000276573 TBX20Q9UMR3 447 aa10.47□□□□□ -0.73
TRIM55-201ENST00000276573 EXOC7Q9UPT5 735 aa10.47□□□□□ -0.73
TRIM55-201ENST00000276573 MAFBQ9Y5Q3 323 aaPredicted RBP10.47□□□□□ -0.73
TRIM55-201ENST00000276573 ZC3H4Q9UPT8 1303 aaKnown RBP10.47□□□□□ -0.73
TRIM55-201ENST00000276573 IGKV6D-21A0A0A0MT36 114 aa10.46□□□□□ -0.73
TRIM55-201ENST00000276573 GSTTP1A0A1W2PQM5 241 aa10.46□□□□□ -0.73
TRIM55-201ENST00000276573 IQCA1LA6NCM1 817 aa10.46□□□□□ -0.73
TRIM55-201ENST00000276573 ANKRD63C9JTQ0 380 aa10.46□□□□□ -0.73
TRIM55-201ENST00000276573 RRP9O43818 475 aaKnown RBP10.46□□□□□ -0.73
TRIM55-201ENST00000276573 TGFB3P10600 412 aa10.46□□□□□ -0.73
TRIM55-201ENST00000276573 GJA5P36382 358 aa10.46□□□□□ -0.73
TRIM55-201ENST00000276573 SOX10P56693 466 aa10.46□□□□□ -0.73
TRIM55-201ENST00000276573 MCCD1P59942 119 aaPredicted RBP10.46□□□□□ -0.73
TRIM55-201ENST00000276573 AMPD2Q01433 879 aa10.46□□□□□ -0.73
TRIM55-201ENST00000276573 ARID5AQ03989 594 aa10.46□□□□□ -0.73
TRIM55-201ENST00000276573 GPR162Q16538 588 aa10.46□□□□□ -0.73
TRIM55-201ENST00000276573 INTS8Q75QN2 995 aaKnown RBP10.46□□□□□ -0.73
TRIM55-201ENST00000276573 MCPH1Q8NEM0 835 aa10.46□□□□□ -0.73
TRIM55-201ENST00000276573 BSNDQ8WZ55 320 aa10.46□□□□□ -0.73
TRIM55-201ENST00000276573 SLC10A4Q96EP9 437 aa10.46□□□□□ -0.73
TRIM55-201ENST00000276573 CBWD1Q9BRT8 395 aa10.46□□□□□ -0.73
TRIM55-201ENST00000276573 PDCL3Q9H2J4 239 aa10.46□□□□□ -0.73
TRIM55-201ENST00000276573 XPNPEP1Q9NQW7 623 aa10.46□□□□□ -0.73
TRIM55-201ENST00000276573 ZNF302Q9NR11 478 aa10.46□□□□□ -0.73
TRIM55-201ENST00000276573 HSPBP1Q9NZL4 362 aa10.46□□□□□ -0.73
TRIM55-201ENST00000276573 SEPT9Q9UHD8 586 aaPredicted RBP10.46□□□□□ -0.73
TRIM55-201ENST00000276573 BZW2Q9Y6E2 419 aaKnown RBP10.46□□□□□ -0.73
TRIM55-201ENST00000276573 IGSF9BQ9UPX0 1349 aa10.46□□□□□ -0.73
TRIM55-201ENST00000276573 DENND3A2RUS2 1198 aa10.46□□□□□ -0.74
TRIM55-201ENST00000276573 SOCS7O14512 581 aa10.46□□□□□ -0.74
TRIM55-201ENST00000276573 TRIM49P0CI25 452 aa10.46□□□□□ -0.74
TRIM55-201ENST00000276573 TRIM49CP0CI26 452 aa10.46□□□□□ -0.74
TRIM55-201ENST00000276573 CNGA1P29973 690 aa10.46□□□□□ -0.74
TRIM55-201ENST00000276573 PRKCIP41743 596 aa10.46□□□□□ -0.74
TRIM55-201ENST00000276573 VAMP7P51809 220 aa10.46□□□□□ -0.74
TRIM55-201ENST00000276573 JAM2P57087 298 aa10.46□□□□□ -0.74
TRIM55-201ENST00000276573 DMP1Q13316 513 aaPredicted RBP10.46□□□□□ -0.74
TRIM55-201ENST00000276573 NEDD9Q14511 834 aa10.46□□□□□ -0.74
TRIM55-201ENST00000276573 CBWD6Q4V339 395 aa10.46□□□□□ -0.74
TRIM55-201ENST00000276573 CBWD3Q5JTY5 395 aa10.46□□□□□ -0.74
TRIM55-201ENST00000276573 CBWD5Q5RIA9 395 aa10.46□□□□□ -0.74
TRIM55-201ENST00000276573 IQCEQ6IPM2 695 aa10.46□□□□□ -0.74
TRIM55-201ENST00000276573 RSRC2Q7L4I2 434 aaKnown RBP10.46□□□□□ -0.74
TRIM55-201ENST00000276573 SRGAP1Q7Z6B7 1085 aa10.46□□□□□ -0.74
TRIM55-201ENST00000276573 PNMA8AQ86V59 439 aaPredicted RBP10.46□□□□□ -0.74
TRIM55-201ENST00000276573 MAP4K3Q8IVH8 894 aa10.46□□□□□ -0.74
TRIM55-201ENST00000276573 TXLNBQ8N3L3 684 aa10.46□□□□□ -0.74
TRIM55-201ENST00000276573 CEP112Q8N8E3 955 aa10.46□□□□□ -0.74
TRIM55-201ENST00000276573 SECISBP2LQ93073 1101 aaKnown RBP10.46□□□□□ -0.74
TRIM55-201ENST00000276573 ATP6V0A4Q9HBG4 840 aa10.46□□□□□ -0.74
TRIM55-201ENST00000276573 AJAP1Q9UKB5 411 aaPredicted RBP10.46□□□□□ -0.74
TRIM55-201ENST00000276573 DOCK5Q9H7D0 1870 aa10.46□□□□□ -0.74
TRIM55-201ENST00000276573 WDR81Q562E7 1941 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 DNAJC25-GNG10A0A024R161 153 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 A0A087X0T9 212 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 FAM228BP0C875 321 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 UBA1P22314 1058 aaKnown RBP10.45□□□□□ -0.74
TRIM55-201ENST00000276573 DLG4P78352 724 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 SNAPC2Q13487 334 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 HSP90AA2PQ14568 343 aaPredicted RBP10.45□□□□□ -0.74
TRIM55-201ENST00000276573 SLC18A3Q16572 532 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 WHAMMP3Q1A5X7 153 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 MTERF2Q49AM1 385 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 PAPD7Q5XG87 772 aaKnown RBP10.45□□□□□ -0.74
TRIM55-201ENST00000276573 GJB7Q6PEY0 223 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 ZSWIM2Q8NEG5 633 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 ZNF526Q8TF50 670 aaPredicted RBP10.45□□□□□ -0.74
TRIM55-201ENST00000276573 IFT74Q96LB3 600 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 NIFKQ9BYG3 293 aaKnown RBP10.45□□□□□ -0.74
TRIM55-201ENST00000276573 INTS2Q9H0H0 1204 aaKnown RBP10.45□□□□□ -0.74
TRIM55-201ENST00000276573 ADAMTS1Q9UHI8 967 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 KCNG1Q9UIX4 513 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 CLEC11AQ9Y240 323 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 MACROD2A1Z1Q3 448 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 UNCXA6NJT0 531 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 P4HA2O15460 535 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 TACC1O75410 805 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 FARP2O94887 1054 aaPredicted RBP10.45□□□□□ -0.74
TRIM55-201ENST00000276573 OATP04181 439 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 ATP1A1P05023 1023 aaKnown RBP10.45□□□□□ -0.74
TRIM55-201ENST00000276573 PGK2P07205 417 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 ADSSP30520 456 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms