RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 LOC102724159A0A0B4J2E5 919 aa11.4□□□□□ -0.58
LRTM1-201ENST00000273286 TSPY2A6NKD2 308 aa11.4□□□□□ -0.58
LRTM1-201ENST00000273286 TMEM232C9JQI7 657 aa11.4□□□□□ -0.58
LRTM1-201ENST00000273286 M0R2C6 588 aa11.4□□□□□ -0.58
LRTM1-201ENST00000273286 PAX4O43316 350 aa11.4□□□□□ -0.58
LRTM1-201ENST00000273286 ASGR1P07306 291 aa11.4□□□□□ -0.58
LRTM1-201ENST00000273286 ITGB8P26012 769 aa11.4□□□□□ -0.58
LRTM1-201ENST00000273286 CDK7P50613 346 aa11.4□□□□□ -0.58
LRTM1-201ENST00000273286 TFAP4Q01664 338 aa11.4□□□□□ -0.58
LRTM1-201ENST00000273286 DSC3Q14574 896 aa11.4□□□□□ -0.58
LRTM1-201ENST00000273286 PWP2Q15269 919 aaKnown RBP11.4□□□□□ -0.58
LRTM1-201ENST00000273286 MFSD5Q6N075 450 aa11.4□□□□□ -0.58
LRTM1-201ENST00000273286 SEZ6L2Q6UXD5 910 aa11.4□□□□□ -0.58
LRTM1-201ENST00000273286 VSIG10LQ86VR7 867 aa11.4□□□□□ -0.58
LRTM1-201ENST00000273286 LRRC47Q8N1G4 583 aaKnown RBP11.4□□□□□ -0.58
LRTM1-201ENST00000273286 MAFAQ8NHW3 353 aaPredicted RBP11.4□□□□□ -0.58
LRTM1-201ENST00000273286 PI4K2BQ8TCG2 481 aa11.4□□□□□ -0.58
LRTM1-201ENST00000273286 PIDD1Q9HB75 910 aa11.4□□□□□ -0.58
LRTM1-201ENST00000273286 C1GALT1Q9NS00 363 aa11.4□□□□□ -0.58
LRTM1-201ENST00000273286 TBX21Q9UL17 535 aa11.4□□□□□ -0.58
LRTM1-201ENST00000273286 PNMA2Q9UL42 364 aa11.4□□□□□ -0.58
LRTM1-201ENST00000273286 ISY1Q9ULR0 285 aaKnown RBP11.4□□□□□ -0.58
LRTM1-201ENST00000273286 CDH23Q9H251 3354 aa11.39□□□□□ -0.59
LRTM1-201ENST00000273286 ARVCFO00192 962 aa11.39□□□□□ -0.59
LRTM1-201ENST00000273286 TREHO43280 583 aa11.39□□□□□ -0.59
LRTM1-201ENST00000273286 ZNF862O60290 1169 aa11.39□□□□□ -0.59
LRTM1-201ENST00000273286 ZEB2O60315 1214 aa11.39□□□□□ -0.59
LRTM1-201ENST00000273286 FOSL2P15408 326 aa11.39□□□□□ -0.59
LRTM1-201ENST00000273286 MX1P20591 662 aa11.39□□□□□ -0.59
LRTM1-201ENST00000273286 ID3Q02535 119 aa11.39□□□□□ -0.59
LRTM1-201ENST00000273286 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.39□□□□□ -0.59
LRTM1-201ENST00000273286 TSHZ3Q63HK5 1081 aa11.39□□□□□ -0.59
LRTM1-201ENST00000273286 RCSD1Q6JBY9 416 aa11.39□□□□□ -0.59
LRTM1-201ENST00000273286 PSRC1Q6PGN9 363 aaPredicted RBP11.39□□□□□ -0.59
LRTM1-201ENST00000273286 CCDC144CPQ8IYA2 1237 aa11.39□□□□□ -0.59
LRTM1-201ENST00000273286 FAM133AQ8N9E0 248 aa11.39□□□□□ -0.59
LRTM1-201ENST00000273286 MTIF3Q9H2K0 278 aaKnown RBP11.39□□□□□ -0.59
LRTM1-201ENST00000273286 A1CFQ9NQ94 594 aaKnown RBP11.39□□□□□ -0.59
LRTM1-201ENST00000273286 KRT82Q9NSB4 513 aa11.39□□□□□ -0.59
LRTM1-201ENST00000273286 RNF146Q9NTX7 359 aa11.39□□□□□ -0.59
LRTM1-201ENST00000273286 CRIM1Q9NZV1 1036 aa11.39□□□□□ -0.59
LRTM1-201ENST00000273286 STX8Q9UNK0 236 aa11.39□□□□□ -0.59
LRTM1-201ENST00000273286 Q9Y3F1 56 aa11.39□□□□□ -0.59
LRTM1-201ENST00000273286 PRNPP04156 253 aa11.38□□□□□ -0.59
LRTM1-201ENST00000273286 SLFN14P0C7P3 912 aa11.38□□□□□ -0.59
LRTM1-201ENST00000273286 PLCB3Q01970 1234 aa11.38□□□□□ -0.59
LRTM1-201ENST00000273286 TNFAIP2Q03169 654 aa11.38□□□□□ -0.59
LRTM1-201ENST00000273286 ENOX2Q16206 610 aaKnown RBP11.38□□□□□ -0.59
LRTM1-201ENST00000273286 ABI1Q8IZP0 508 aa11.38□□□□□ -0.59
LRTM1-201ENST00000273286 KCNB2Q92953 911 aa11.38□□□□□ -0.59
LRTM1-201ENST00000273286 FGD4Q96M96 766 aa11.38□□□□□ -0.59
LRTM1-201ENST00000273286 FANCD2OSQ96PS1 177 aa11.38□□□□□ -0.59
LRTM1-201ENST00000273286 AP5M1Q9H0R1 490 aa11.38□□□□□ -0.59
LRTM1-201ENST00000273286 TTYH1Q9H313 450 aaPredicted RBP11.38□□□□□ -0.59
LRTM1-201ENST00000273286 ATXN3LQ9H3M9 355 aa11.38□□□□□ -0.59
LRTM1-201ENST00000273286 HOMER2Q9NSB8 354 aa11.38□□□□□ -0.59
LRTM1-201ENST00000273286 ANAPC4Q9UJX5 808 aa11.38□□□□□ -0.59
LRTM1-201ENST00000273286 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.38□□□□□ -0.59
LRTM1-201ENST00000273286 ORC4O43929 436 aa11.37□□□□□ -0.59
LRTM1-201ENST00000273286 MCCP23508 829 aa11.37□□□□□ -0.59
LRTM1-201ENST00000273286 NT5C2P49902 561 aa11.37□□□□□ -0.59
LRTM1-201ENST00000273286 IQSEC1Q6DN90 963 aa11.37□□□□□ -0.59
LRTM1-201ENST00000273286 NXPE4Q6UWF7 544 aa11.37□□□□□ -0.59
LRTM1-201ENST00000273286 FAM126BQ8IXS8 530 aa11.37□□□□□ -0.59
LRTM1-201ENST00000273286 DCAF4Q8WV16 495 aa11.37□□□□□ -0.59
LRTM1-201ENST00000273286 EVI5LQ96CN4 794 aa11.37□□□□□ -0.59
LRTM1-201ENST00000273286 KRTAP4-12Q9BQ66 201 aa11.37□□□□□ -0.59
LRTM1-201ENST00000273286 KATNBL1Q9H079 304 aa11.37□□□□□ -0.59
LRTM1-201ENST00000273286 ADD3Q9UEY8 706 aaKnown RBP11.37□□□□□ -0.59
LRTM1-201ENST00000273286 ADGRE2Q9UHX3 823 aa11.37□□□□□ -0.59
LRTM1-201ENST00000273286 MCM3APO60318 1980 aa11.37□□□□□ -0.59
LRTM1-201ENST00000273286 ZNF536O15090 1300 aa11.36□□□□□ -0.59
LRTM1-201ENST00000273286 MYADML2A6NDP7 307 aa11.36□□□□□ -0.59
LRTM1-201ENST00000273286 ICAM1P05362 532 aa11.36□□□□□ -0.59
LRTM1-201ENST00000273286 PCP11498 1178 aaKnown RBP11.36□□□□□ -0.59
LRTM1-201ENST00000273286 ALAS1P13196 640 aa11.36□□□□□ -0.59
LRTM1-201ENST00000273286 NOVP48745 357 aa11.36□□□□□ -0.59
LRTM1-201ENST00000273286 EPHB4P54760 987 aa11.36□□□□□ -0.59
LRTM1-201ENST00000273286 CNTN2Q02246 1040 aa11.36□□□□□ -0.59
LRTM1-201ENST00000273286 NOL8Q76FK4 1167 aaKnown RBP11.36□□□□□ -0.59
LRTM1-201ENST00000273286 TLK2Q86UE8 772 aa11.36□□□□□ -0.59
LRTM1-201ENST00000273286 PDZD3Q86UT5 571 aa11.36□□□□□ -0.59
LRTM1-201ENST00000273286 SULF2Q8IWU5 870 aa11.36□□□□□ -0.59
LRTM1-201ENST00000273286 MYLIPQ8WY64 445 aa11.36□□□□□ -0.59
LRTM1-201ENST00000273286 TIFAQ96CG3 184 aa11.36□□□□□ -0.59
LRTM1-201ENST00000273286 SEC62Q99442 399 aaKnown RBP11.36□□□□□ -0.59
LRTM1-201ENST00000273286 MPHOSPH6Q99547 160 aaKnown RBP11.36□□□□□ -0.59
LRTM1-201ENST00000273286 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.36□□□□□ -0.59
LRTM1-201ENST00000273286 VTA1Q9NP79 307 aa11.36□□□□□ -0.59
LRTM1-201ENST00000273286 HELLSQ9NRZ9 838 aa11.36□□□□□ -0.59
LRTM1-201ENST00000273286 CYP39A1Q9NYL5 469 aa11.36□□□□□ -0.59
LRTM1-201ENST00000273286 PCDHGC5Q9Y5F6 944 aa11.36□□□□□ -0.59
LRTM1-201ENST00000273286 ZMYM6O95789 1325 aa11.36□□□□□ -0.59
LRTM1-201ENST00000273286 ADCY6O43306 1168 aa11.35□□□□□ -0.59
LRTM1-201ENST00000273286 RANBP6O60518 1105 aaKnown RBP11.35□□□□□ -0.59
LRTM1-201ENST00000273286 CD4P01730 458 aa11.35□□□□□ -0.59
LRTM1-201ENST00000273286 FGRP09769 529 aa11.35□□□□□ -0.59
LRTM1-201ENST00000273286 ALX1Q15699 326 aa11.35□□□□□ -0.59
LRTM1-201ENST00000273286 FSCN1Q16658 493 aaKnown RBP11.35□□□□□ -0.59
LRTM1-201ENST00000273286 RASIP1Q5U651 963 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms