RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 NHLH1Q02575 133 aa10.14□□□□□ -0.79
TPM3-201ENST00000271850 TOB2Q14106 344 aaPredicted RBP10.14□□□□□ -0.79
TPM3-201ENST00000271850 TARBP2Q15633 366 aaKnown RBP10.14□□□□□ -0.79
TPM3-201ENST00000271850 C6orf132Q5T0Z8 1188 aa10.14□□□□□ -0.79
TPM3-201ENST00000271850 SYCE2Q6PIF2 218 aa10.14□□□□□ -0.79
TPM3-201ENST00000271850 CENPQQ7L2Z9 268 aaPredicted RBP10.14□□□□□ -0.79
TPM3-201ENST00000271850 ZNF598Q86UK7 904 aaKnown RBP10.14□□□□□ -0.79
TPM3-201ENST00000271850 ALYREFQ86V81 257 aaKnown RBP10.14□□□□□ -0.79
TPM3-201ENST00000271850 SMAP1Q8IYB5 467 aaPredicted RBP10.14□□□□□ -0.79
TPM3-201ENST00000271850 REXO1Q8N1G1 1221 aaKnown RBP10.14□□□□□ -0.79
TPM3-201ENST00000271850 GLT8D2Q9H1C3 349 aa10.14□□□□□ -0.79
TPM3-201ENST00000271850 UNC45AQ9H3U1 944 aa10.14□□□□□ -0.79
TPM3-201ENST00000271850 TLR9Q9NR96 1032 aa10.14□□□□□ -0.79
TPM3-201ENST00000271850 C1orf112Q9NSG2 853 aa10.14□□□□□ -0.79
TPM3-201ENST00000271850 TMEM161AQ9NX61 479 aa10.14□□□□□ -0.79
TPM3-201ENST00000271850 LRFN2Q9ULH4 789 aa10.14□□□□□ -0.79
TPM3-201ENST00000271850 PCDHB7Q9Y5E2 793 aa10.14□□□□□ -0.79
TPM3-201ENST00000271850 PCDHA10Q9Y5I2 948 aa10.14□□□□□ -0.79
TPM3-201ENST00000271850 KMT2EQ8IZD2 1858 aa10.14□□□□□ -0.79
TPM3-201ENST00000271850 DENND3A2RUS2 1198 aa10.13□□□□□ -0.79
TPM3-201ENST00000271850 MEIS3P2A8K0S8 358 aa10.13□□□□□ -0.79
TPM3-201ENST00000271850 GPR182O15218 404 aa10.13□□□□□ -0.79
TPM3-201ENST00000271850 B4GALT3O60512 393 aa10.13□□□□□ -0.79
TPM3-201ENST00000271850 DTNBO60941 627 aa10.13□□□□□ -0.79
TPM3-201ENST00000271850 CSDE1O75534 798 aaKnown RBP10.13□□□□□ -0.79
TPM3-201ENST00000271850 OATP04181 439 aa10.13□□□□□ -0.79
TPM3-201ENST00000271850 PDIA3P30101 505 aaKnown RBP10.13□□□□□ -0.79
TPM3-201ENST00000271850 NLRP11P59045 1033 aaKnown RBP10.13□□□□□ -0.79
TPM3-201ENST00000271850 PRKCEQ02156 737 aa10.13□□□□□ -0.79
TPM3-201ENST00000271850 KRT32Q14532 448 aa10.13□□□□□ -0.79
TPM3-201ENST00000271850 PLPP4Q5VZY2 271 aa10.13□□□□□ -0.79
TPM3-201ENST00000271850 EFCAB12Q6NXP0 572 aa10.13□□□□□ -0.79
TPM3-201ENST00000271850 TMEM173Q86WV6 379 aaPredicted RBP10.13□□□□□ -0.79
TPM3-201ENST00000271850 ECHDC2Q86YB7 292 aa10.13□□□□□ -0.79
TPM3-201ENST00000271850 METTL13Q8N6R0 699 aa10.13□□□□□ -0.79
TPM3-201ENST00000271850 PRSS33Q8NF86 280 aa10.13□□□□□ -0.79
TPM3-201ENST00000271850 EDAQ92838 391 aa10.13□□□□□ -0.79
TPM3-201ENST00000271850 SLC5A5Q92911 643 aa10.13□□□□□ -0.79
TPM3-201ENST00000271850 TNPO1Q92973 898 aaKnown RBP10.13□□□□□ -0.79
TPM3-201ENST00000271850 AIFM3Q96NN9 605 aa10.13□□□□□ -0.79
TPM3-201ENST00000271850 SH2D3AQ9BRG2 576 aa10.13□□□□□ -0.79
TPM3-201ENST00000271850 ELAC1Q9H777 363 aaKnown RBP10.13□□□□□ -0.79
TPM3-201ENST00000271850 TBC1D22BQ9NU19 505 aa10.13□□□□□ -0.79
TPM3-201ENST00000271850 NAP1L2Q9ULW6 460 aaPredicted RBP10.13□□□□□ -0.79
TPM3-201ENST00000271850 FAM50BQ9Y247 325 aa10.13□□□□□ -0.79
TPM3-201ENST00000271850 CACNA1HO95180 2353 aa10.12□□□□□ -0.79
TPM3-201ENST00000271850 IGKV6-21A0A0C4DH24 114 aa10.12□□□□□ -0.79
TPM3-201ENST00000271850 PSMD10O75832 226 aa10.12□□□□□ -0.79
TPM3-201ENST00000271850 TDP2O95551 362 aa10.12□□□□□ -0.79
TPM3-201ENST00000271850 PSAPP07602 524 aa10.12□□□□□ -0.79
TPM3-201ENST00000271850 HMGB1P09429 215 aaKnown RBP10.12□□□□□ -0.79
TPM3-201ENST00000271850 DARSP14868 501 aaKnown RBP10.12□□□□□ -0.79
TPM3-201ENST00000271850 IFNAR1P17181 557 aa10.12□□□□□ -0.79
TPM3-201ENST00000271850 CCT2P78371 535 aaKnown RBP10.12□□□□□ -0.79
TPM3-201ENST00000271850 ZXDAP98168 799 aa10.12□□□□□ -0.79
TPM3-201ENST00000271850 PLCB3Q01970 1234 aa10.12□□□□□ -0.79
TPM3-201ENST00000271850 UBE3AQ05086 875 aa10.12□□□□□ -0.79
TPM3-201ENST00000271850 TMEM184AQ6ZMB5 413 aa10.12□□□□□ -0.79
TPM3-201ENST00000271850 CKAP2LQ8IYA6 745 aa10.12□□□□□ -0.79
TPM3-201ENST00000271850 THNSL1Q8IYQ7 743 aa10.12□□□□□ -0.79
TPM3-201ENST00000271850 ETNPPLQ8TBG4 499 aa10.12□□□□□ -0.79
TPM3-201ENST00000271850 BCL7CQ8WUZ0 217 aaPredicted RBP10.12□□□□□ -0.79
TPM3-201ENST00000271850 MRPS27Q92552 414 aaKnown RBP10.12□□□□□ -0.79
TPM3-201ENST00000271850 ASIC4Q96FT7 647 aa10.12□□□□□ -0.79
TPM3-201ENST00000271850 CCDC136Q96JN2 1154 aa10.12□□□□□ -0.79
TPM3-201ENST00000271850 MBOAT7Q96N66 472 aa10.12□□□□□ -0.79
TPM3-201ENST00000271850 POP1Q99575 1024 aaKnown RBP10.12□□□□□ -0.79
TPM3-201ENST00000271850 SLC26A6Q9BXS9 759 aa10.12□□□□□ -0.79
TPM3-201ENST00000271850 RNF26Q9BY78 433 aaPredicted RBP10.12□□□□□ -0.79
TPM3-201ENST00000271850 TMEM117Q9H0C3 514 aa10.12□□□□□ -0.79
TPM3-201ENST00000271850 TLE6Q9H808 572 aa10.12□□□□□ -0.79
TPM3-201ENST00000271850 ATP6V0A4Q9HBG4 840 aa10.12□□□□□ -0.79
TPM3-201ENST00000271850 C6orf50Q9HD87 102 aa10.12□□□□□ -0.79
TPM3-201ENST00000271850 DISC1Q9NRI5 854 aa10.12□□□□□ -0.79
TPM3-201ENST00000271850 WDR64B1ANS9 1081 aa10.11□□□□□ -0.79
TPM3-201ENST00000271850 CHMP2AO43633 222 aa10.11□□□□□ -0.79
TPM3-201ENST00000271850 LAG3P18627 525 aa10.11□□□□□ -0.79
TPM3-201ENST00000271850 EIF4BP23588 611 aaKnown RBP10.11□□□□□ -0.79
TPM3-201ENST00000271850 SPOUT1Q5T280 376 aaKnown RBP10.11□□□□□ -0.79
TPM3-201ENST00000271850 ANKRD54Q6NXT1 300 aa10.11□□□□□ -0.79
TPM3-201ENST00000271850 BLOC1S2Q6QNY1 142 aa10.11□□□□□ -0.79
TPM3-201ENST00000271850 KCNT2Q6UVM3 1135 aa10.11□□□□□ -0.79
TPM3-201ENST00000271850 TRIM67Q6ZTA4 783 aa10.11□□□□□ -0.79
TPM3-201ENST00000271850 SLC39A11Q8N1S5 342 aa10.11□□□□□ -0.79
TPM3-201ENST00000271850 TBCKQ8TEA7 893 aa10.11□□□□□ -0.79
TPM3-201ENST00000271850 TCF25Q9BQ70 676 aa10.11□□□□□ -0.79
TPM3-201ENST00000271850 APOL5Q9BWW9 433 aa10.11□□□□□ -0.79
TPM3-201ENST00000271850 PHF7Q9BWX1 381 aaPredicted RBP10.11□□□□□ -0.79
TPM3-201ENST00000271850 VN1R3Q9BXE9 311 aa10.11□□□□□ -0.79
TPM3-201ENST00000271850 WRAP73Q9P2S5 460 aaPredicted RBP10.11□□□□□ -0.79
TPM3-201ENST00000271850 AKT3Q9Y243 479 aa10.11□□□□□ -0.79
TPM3-201ENST00000271850 LZTS1Q9Y250 596 aa10.11□□□□□ -0.79
TPM3-201ENST00000271850 PCDHB12Q9Y5F1 795 aa10.11□□□□□ -0.79
TPM3-201ENST00000271850 CFAP54Q96N23 3096 aa10.1□□□□□ -0.79
TPM3-201ENST00000271850 CYP3A7-CYP3A51PA0A087WV96 503 aa10.1□□□□□ -0.79
TPM3-201ENST00000271850 A0A0U1RQF3 1178 aa10.1□□□□□ -0.79
TPM3-201ENST00000271850 CCDC196A0A1B0GTZ2 297 aa10.1□□□□□ -0.79
TPM3-201ENST00000271850 TMEM221A6NGB7 291 aa10.1□□□□□ -0.79
TPM3-201ENST00000271850 NT5C1B-RDH14C9J2C7 533 aa10.1□□□□□ -0.79
TPM3-201ENST00000271850 M0R296 226 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms