RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 CCDC174Q6PII3 467 aa24.02■■□□□ 1.44
CDR2-201ENST00000268383 OTOP1Q7RTM1 612 aa24.02■■□□□ 1.44
CDR2-201ENST00000268383 POLR3CQ9BUI4 534 aaPredicted RBP24.02■■□□□ 1.44
CDR2-201ENST00000268383 STK33Q9BYT3 514 aa24.02■■□□□ 1.44
CDR2-201ENST00000268383 SLITRK6Q9H5Y7 841 aa24.02■■□□□ 1.44
CDR2-201ENST00000268383 OLFML3Q9NRN5 406 aa24.02■■□□□ 1.44
CDR2-201ENST00000268383 IFFO1Q0D2I5 559 aa24.01■■□□□ 1.43
CDR2-201ENST00000268383 KIAA1755Q5JYT7 1200 aa24.01■■□□□ 1.43
CDR2-201ENST00000268383 CNPY4Q8N129 248 aa24.01■■□□□ 1.43
CDR2-201ENST00000268383 PRPF38AQ8NAV1 312 aaKnown RBP24.01■■□□□ 1.43
CDR2-201ENST00000268383 PARVGQ9HBI0 331 aa24.01■■□□□ 1.43
CDR2-201ENST00000268383 ACP6Q9NPH0 428 aa24.01■■□□□ 1.43
CDR2-201ENST00000268383 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.01■■□□□ 1.43
CDR2-201ENST00000268383 DDX39AO00148 427 aaKnown RBP24.01■■□□□ 1.43
CDR2-201ENST00000268383 CAND2O75155 1236 aa24.01■■□□□ 1.43
CDR2-201ENST00000268383 PLTPP55058 493 aa24.01■■□□□ 1.43
CDR2-201ENST00000268383 ZSWIM2Q8NEG5 633 aa24.01■■□□□ 1.43
CDR2-201ENST00000268383 KRT35Q92764 455 aa24.01■■□□□ 1.43
CDR2-201ENST00000268383 PNMA2Q9UL42 364 aa24.01■■□□□ 1.43
CDR2-201ENST00000268383 BMP3P12645 472 aa24■■□□□ 1.43
CDR2-201ENST00000268383 ADRA2BP18089 450 aa24■■□□□ 1.43
CDR2-201ENST00000268383 TNFAIP3P21580 790 aa24■■□□□ 1.43
CDR2-201ENST00000268383 ODR4Q5SWX8 454 aa24■■□□□ 1.43
CDR2-201ENST00000268383 FAM178BQ8IXR5 827 aa24■■□□□ 1.43
CDR2-201ENST00000268383 C1orf131Q8NDD1 294 aaKnown RBP24■■□□□ 1.43
CDR2-201ENST00000268383 FMO2Q99518 471 aa24■■□□□ 1.43
CDR2-201ENST00000268383 AGPAT3Q9NRZ7 376 aa24■■□□□ 1.43
CDR2-201ENST00000268383 PRR12Q9ULL5 1215 aa24■■□□□ 1.43
CDR2-201ENST00000268383 MYH11P35749 1972 aa24■■□□□ 1.43
CDR2-201ENST00000268383 TLDC2A0PJX2 215 aa24■■□□□ 1.43
CDR2-201ENST00000268383 TRAPPC3O43617 180 aa24■■□□□ 1.43
CDR2-201ENST00000268383 CLSTN1O94985 981 aa24■■□□□ 1.43
CDR2-201ENST00000268383 KRT13P13646 458 aa24■■□□□ 1.43
CDR2-201ENST00000268383 CIITAP33076 1130 aa24■■□□□ 1.43
CDR2-201ENST00000268383 RUFY4Q6ZNE9 571 aa24■■□□□ 1.43
CDR2-201ENST00000268383 ELMO3Q96BJ8 720 aa24■■□□□ 1.43
CDR2-201ENST00000268383 C18orf8Q96DM3 657 aa24■■□□□ 1.43
CDR2-201ENST00000268383 ATMINO43313 823 aaPredicted RBP23.99■■□□□ 1.43
CDR2-201ENST00000268383 DR1Q01658 176 aa23.99■■□□□ 1.43
CDR2-201ENST00000268383 ZNF720Q7Z2F6 126 aa23.99■■□□□ 1.43
CDR2-201ENST00000268383 ARFGAP2Q8N6H7 521 aa23.99■■□□□ 1.43
CDR2-201ENST00000268383 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.99■■□□□ 1.43
CDR2-201ENST00000268383 SYT11Q9BT88 431 aa23.99■■□□□ 1.43
CDR2-201ENST00000268383 TDRD3Q9H7E2 651 aaKnown RBP23.99■■□□□ 1.43
CDR2-201ENST00000268383 UBR3Q6ZT12 1888 aa23.99■■□□□ 1.43
CDR2-201ENST00000268383 GTPBP10A4D1E9 387 aaKnown RBP23.99■■□□□ 1.43
CDR2-201ENST00000268383 FSBPO95073 299 aa23.99■■□□□ 1.43
CDR2-201ENST00000268383 TMEM253P0C7T8 217 aa23.99■■□□□ 1.43
CDR2-201ENST00000268383 LMNB1P20700 586 aa23.99■■□□□ 1.43
CDR2-201ENST00000268383 SUGP1Q8IWZ8 645 aaKnown RBP23.99■■□□□ 1.43
CDR2-201ENST00000268383 CCDC13Q8IYE1 715 aa23.99■■□□□ 1.43
CDR2-201ENST00000268383 FOSP01100 380 aaPredicted RBP23.98■■□□□ 1.43
CDR2-201ENST00000268383 C6orf89Q6UWU4 347 aa23.98■■□□□ 1.43
CDR2-201ENST00000268383 MICALCLQ6ZW33 695 aa23.98■■□□□ 1.43
CDR2-201ENST00000268383 EIF1ADQ8N9N8 165 aaKnown RBP23.98■■□□□ 1.43
CDR2-201ENST00000268383 KAT5Q92993 513 aa23.98■■□□□ 1.43
CDR2-201ENST00000268383 ZDHHC15Q96MV8 337 aa23.98■■□□□ 1.43
CDR2-201ENST00000268383 APEX2Q9UBZ4 518 aa23.98■■□□□ 1.43
CDR2-201ENST00000268383 SLC26A4O43511 780 aa23.98■■□□□ 1.43
CDR2-201ENST00000268383 PPP1R12BO60237 982 aaPredicted RBP23.98■■□□□ 1.43
CDR2-201ENST00000268383 EXOC3O60645 756 aa23.98■■□□□ 1.43
CDR2-201ENST00000268383 USP8P40818 1118 aa23.98■■□□□ 1.43
CDR2-201ENST00000268383 MYL7Q01449 175 aa23.98■■□□□ 1.43
CDR2-201ENST00000268383 TMEM179Q6ZVK1 233 aa23.98■■□□□ 1.43
CDR2-201ENST00000268383 ZDHHC14Q8IZN3 488 aa23.98■■□□□ 1.43
CDR2-201ENST00000268383 SEC14L1Q92503 715 aa23.98■■□□□ 1.43
CDR2-201ENST00000268383 OSBPL7Q9BZF2 842 aa23.98■■□□□ 1.43
CDR2-201ENST00000268383 EPB41L4BQ9H329 900 aa23.98■■□□□ 1.43
CDR2-201ENST00000268383 INTUQ9ULD6 942 aa23.98■■□□□ 1.43
CDR2-201ENST00000268383 ARP10275 920 aa23.97■■□□□ 1.43
CDR2-201ENST00000268383 NPEPPSP55786 919 aa23.97■■□□□ 1.43
CDR2-201ENST00000268383 BIRC3Q13489 604 aa23.97■■□□□ 1.43
CDR2-201ENST00000268383 BYSLQ13895 437 aaKnown RBP23.97■■□□□ 1.43
CDR2-201ENST00000268383 MCTP2Q6DN12 878 aa23.97■■□□□ 1.43
CDR2-201ENST00000268383 TATDN1Q6P1N9 297 aa23.97■■□□□ 1.43
CDR2-201ENST00000268383 ARHGEF19Q8IW93 802 aa23.97■■□□□ 1.43
CDR2-201ENST00000268383 FBXO25Q8TCJ0 367 aa23.97■■□□□ 1.43
CDR2-201ENST00000268383 FAM114A2Q9NRY5 505 aa23.97■■□□□ 1.43
CDR2-201ENST00000268383 FRMD4BQ9Y2L6 1034 aa23.97■■□□□ 1.43
CDR2-201ENST00000268383 NCANO14594 1321 aa23.97■■□□□ 1.43
CDR2-201ENST00000268383 PSMD10O75832 226 aa23.97■■□□□ 1.43
CDR2-201ENST00000268383 GAP43P17677 238 aa23.97■■□□□ 1.43
CDR2-201ENST00000268383 PTENP60484 403 aa23.97■■□□□ 1.43
CDR2-201ENST00000268383 MTMR3Q13615 1198 aa23.97■■□□□ 1.43
CDR2-201ENST00000268383 ZYXQ15942 572 aaKnown RBP23.97■■□□□ 1.43
CDR2-201ENST00000268383 HS2ST1Q7LGA3 356 aa23.97■■□□□ 1.43
CDR2-201ENST00000268383 SYCP3Q8IZU3 236 aa23.97■■□□□ 1.43
CDR2-201ENST00000268383 BTBD6Q96KE9 485 aa23.97■■□□□ 1.43
CDR2-201ENST00000268383 UBE2TQ9NPD8 197 aaPredicted RBP23.97■■□□□ 1.43
CDR2-201ENST00000268383 DAAM1Q9Y4D1 1078 aa23.97■■□□□ 1.43
CDR2-201ENST00000268383 ALG6Q9Y672 507 aa23.97■■□□□ 1.43
CDR2-201ENST00000268383 KLRG2A4D1S0 409 aaPredicted RBP23.97■■□□□ 1.43
CDR2-201ENST00000268383 DNM1LO00429 736 aa23.97■■□□□ 1.43
CDR2-201ENST00000268383 ACER1Q8TDN7 264 aa23.97■■□□□ 1.43
CDR2-201ENST00000268383 SEC16BQ96JE7 1060 aa23.97■■□□□ 1.43
CDR2-201ENST00000268383 PAGR1Q9BTK6 254 aa23.97■■□□□ 1.43
CDR2-201ENST00000268383 CD248Q9HCU0 757 aa23.97■■□□□ 1.43
CDR2-201ENST00000268383 C10orf71Q711Q0 1435 aa23.96■■□□□ 1.43
CDR2-201ENST00000268383 IBSPP21815 317 aaPredicted RBP23.96■■□□□ 1.43
CDR2-201ENST00000268383 ERP44Q9BS26 406 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms