RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 SPDYE6P0CI01 402 aa16.55■□□□□ 0.24
TIMP3-201ENST00000266085 BASP1P80723 227 aaKnown RBP16.55■□□□□ 0.24
TIMP3-201ENST00000266085 DRAP1Q14919 205 aaPredicted RBP16.55■□□□□ 0.24
TIMP3-201ENST00000266085 ZKSCAN4Q969J2 545 aaPredicted RBP16.55■□□□□ 0.24
TIMP3-201ENST00000266085 MYMKA6NI61 221 aa16.54■□□□□ 0.24
TIMP3-201ENST00000266085 PDXKO00764 312 aa16.54■□□□□ 0.24
TIMP3-201ENST00000266085 CAP2P40123 477 aa16.54■□□□□ 0.24
TIMP3-201ENST00000266085 DR1Q01658 176 aa16.54■□□□□ 0.24
TIMP3-201ENST00000266085 PRPSAP1Q14558 356 aa16.54■□□□□ 0.24
TIMP3-201ENST00000266085 FMO2Q99518 471 aa16.54■□□□□ 0.24
TIMP3-201ENST00000266085 EDEM3Q9BZQ6 932 aa16.54■□□□□ 0.24
TIMP3-201ENST00000266085 AGO2Q9UKV8 859 aaKnown RBP16.54■□□□□ 0.24
TIMP3-201ENST00000266085 PFDN6O15212 129 aa16.54■□□□□ 0.24
TIMP3-201ENST00000266085 DGAT1O75907 488 aa16.54■□□□□ 0.24
TIMP3-201ENST00000266085 ACTN1P12814 892 aa16.54■□□□□ 0.24
TIMP3-201ENST00000266085 GPC5P78333 572 aa16.54■□□□□ 0.24
TIMP3-201ENST00000266085 GRIN1Q05586 938 aa16.54■□□□□ 0.24
TIMP3-201ENST00000266085 PASD1Q8IV76 773 aa16.54■□□□□ 0.24
TIMP3-201ENST00000266085 ADSSL1Q8N142 457 aa16.54■□□□□ 0.24
TIMP3-201ENST00000266085 WHAMMQ8TF30 809 aa16.54■□□□□ 0.24
TIMP3-201ENST00000266085 PRKAG2Q9UGJ0 569 aa16.54■□□□□ 0.24
TIMP3-201ENST00000266085 NWD1Q149M9 1564 aa16.54■□□□□ 0.24
TIMP3-201ENST00000266085 CCDC160A6NGH7 325 aa16.54■□□□□ 0.24
TIMP3-201ENST00000266085 SLMAPQ14BN4 828 aa16.54■□□□□ 0.24
TIMP3-201ENST00000266085 ANKRD13AQ8IZ07 590 aa16.54■□□□□ 0.24
TIMP3-201ENST00000266085 RNF10Q8N5U6 811 aaKnown RBP16.54■□□□□ 0.24
TIMP3-201ENST00000266085 SEPT1Q8WYJ6 367 aa16.54■□□□□ 0.24
TIMP3-201ENST00000266085 RBAKQ9NYW8 714 aaPredicted RBP16.54■□□□□ 0.24
TIMP3-201ENST00000266085 EMSYQ7Z589 1322 aa16.54■□□□□ 0.24
TIMP3-201ENST00000266085 DDTLA6NHG4 134 aaPredicted RBP16.54■□□□□ 0.24
TIMP3-201ENST00000266085 ZRANB2O95218 330 aaKnown RBP eCLIP16.54■□□□□ 0.24
TIMP3-201ENST00000266085 ZNF18P17022 549 aa16.54■□□□□ 0.24
TIMP3-201ENST00000266085 IFNAR2P48551 515 aa16.54■□□□□ 0.24
TIMP3-201ENST00000266085 TPD52P55327 224 aaPredicted RBP16.54■□□□□ 0.24
TIMP3-201ENST00000266085 RPS6P62753 249 aaKnown RBP16.54■□□□□ 0.24
TIMP3-201ENST00000266085 GFPT1Q06210 699 aaPredicted RBP16.54■□□□□ 0.24
TIMP3-201ENST00000266085 DARS2Q6PI48 645 aaKnown RBP16.54■□□□□ 0.24
TIMP3-201ENST00000266085 REEP2Q9BRK0 252 aa16.54■□□□□ 0.24
TIMP3-201ENST00000266085 KIF20BQ96Q89 1820 aa16.53■□□□□ 0.24
TIMP3-201ENST00000266085 RICTORQ6R327 1708 aa16.53■□□□□ 0.24
TIMP3-201ENST00000266085 IL1R1P14778 569 aa16.53■□□□□ 0.24
TIMP3-201ENST00000266085 CLCN6P51797 869 aa16.53■□□□□ 0.24
TIMP3-201ENST00000266085 GTF2A1P52655 376 aaPredicted RBP16.53■□□□□ 0.24
TIMP3-201ENST00000266085 FMR1Q06787 632 aaKnown RBP eCLIP16.53■□□□□ 0.24
TIMP3-201ENST00000266085 DPYDQ12882 1025 aa16.53■□□□□ 0.24
TIMP3-201ENST00000266085 IQCB1Q15051 598 aa16.53■□□□□ 0.24
TIMP3-201ENST00000266085 TKFCQ3LXA3 575 aa16.53■□□□□ 0.24
TIMP3-201ENST00000266085 DPF2Q92785 391 aa16.53■□□□□ 0.24
TIMP3-201ENST00000266085 C7orf25Q9BPX7 421 aa16.53■□□□□ 0.24
TIMP3-201ENST00000266085 SAT1P21673 171 aa16.53■□□□□ 0.24
TIMP3-201ENST00000266085 GARSP41250 739 aaKnown RBP16.53■□□□□ 0.24
TIMP3-201ENST00000266085 GPC3P51654 580 aa16.53■□□□□ 0.24
TIMP3-201ENST00000266085 SLC7A5Q01650 507 aa16.53■□□□□ 0.24
TIMP3-201ENST00000266085 CDO1Q16878 200 aa16.53■□□□□ 0.24
TIMP3-201ENST00000266085 DNAAF3Q8N9W5 541 aa16.53■□□□□ 0.24
TIMP3-201ENST00000266085 SLC12A6Q9UHW9 1150 aa16.53■□□□□ 0.24
TIMP3-201ENST00000266085 TUBE1Q9UJT0 475 aa16.53■□□□□ 0.24
TIMP3-201ENST00000266085 MFSD14CQ5VZR4 134 aa16.53■□□□□ 0.24
TIMP3-201ENST00000266085 LRRC8CQ8TDW0 803 aa16.53■□□□□ 0.24
TIMP3-201ENST00000266085 RSRC1Q96IZ7 334 aaKnown RBP16.53■□□□□ 0.24
TIMP3-201ENST00000266085 BAZ2BQ9UIF8 2168 aaKnown RBP16.53■□□□□ 0.24
TIMP3-201ENST00000266085 TYW5A2RUC4 315 aaKnown RBP16.52■□□□□ 0.24
TIMP3-201ENST00000266085 RHOBTB3O94955 611 aa16.52■□□□□ 0.24
TIMP3-201ENST00000266085 PSMA2P25787 234 aa16.52■□□□□ 0.24
TIMP3-201ENST00000266085 DDR1Q08345 913 aa16.52■□□□□ 0.24
TIMP3-201ENST00000266085 ZNF746Q6NUN9 644 aaPredicted RBP16.52■□□□□ 0.24
TIMP3-201ENST00000266085 FRMD5Q7Z6J6 570 aa16.52■□□□□ 0.24
TIMP3-201ENST00000266085 TMEM143Q96AN5 459 aa16.52■□□□□ 0.24
TIMP3-201ENST00000266085 C11orf70Q9BRQ4 267 aa16.52■□□□□ 0.24
TIMP3-201ENST00000266085 GCOM2Q9BZD3 368 aaPredicted RBP16.52■□□□□ 0.24
TIMP3-201ENST00000266085 SPDYE16A6NNV3 312 aaPredicted RBP16.52■□□□□ 0.24
TIMP3-201ENST00000266085 TBXAS1P24557 533 aaPredicted RBP16.52■□□□□ 0.24
TIMP3-201ENST00000266085 SEC23AQ15436 765 aa16.52■□□□□ 0.24
TIMP3-201ENST00000266085 NBPF9Q3BBW0 867 aa16.52■□□□□ 0.24
TIMP3-201ENST00000266085 SPDYE2Q495Y8 402 aa16.52■□□□□ 0.24
TIMP3-201ENST00000266085 SCYL3Q8IZE3 742 aa16.52■□□□□ 0.24
TIMP3-201ENST00000266085 MXRA8Q9BRK3 442 aa16.52■□□□□ 0.24
TIMP3-201ENST00000266085 INTS2Q9H0H0 1204 aaKnown RBP16.52■□□□□ 0.24
TIMP3-201ENST00000266085 SYNGAP1Q96PV0 1343 aa16.52■□□□□ 0.23
TIMP3-201ENST00000266085 RFX1P22670 979 aa16.52■□□□□ 0.23
TIMP3-201ENST00000266085 ZNF157P51786 506 aaPredicted RBP16.52■□□□□ 0.23
TIMP3-201ENST00000266085 TGFB2P61812 414 aa16.52■□□□□ 0.23
TIMP3-201ENST00000266085 EMBQ6PCB8 327 aa16.52■□□□□ 0.23
TIMP3-201ENST00000266085 IPO11Q9UI26 975 aaKnown RBP16.52■□□□□ 0.23
TIMP3-201ENST00000266085 DYNC1LI2O43237 492 aaPredicted RBP16.52■□□□□ 0.23
TIMP3-201ENST00000266085 HUS1O60921 280 aa16.52■□□□□ 0.23
TIMP3-201ENST00000266085 SRGAP2BP0DMP2 458 aa16.52■□□□□ 0.23
TIMP3-201ENST00000266085 RPS6KA2Q15349 733 aa16.52■□□□□ 0.23
TIMP3-201ENST00000266085 ARHGEF18Q6ZSZ5 1173 aa16.52■□□□□ 0.23
TIMP3-201ENST00000266085 GPD1LQ8N335 351 aa16.52■□□□□ 0.23
TIMP3-201ENST00000266085 RNF139Q8WU17 664 aa16.52■□□□□ 0.23
TIMP3-201ENST00000266085 RIT2Q99578 217 aa16.52■□□□□ 0.23
TIMP3-201ENST00000266085 ATP8B3O60423 1300 aa16.51■□□□□ 0.23
TIMP3-201ENST00000266085 CPP00450 1065 aa16.51■□□□□ 0.23
TIMP3-201ENST00000266085 EFNA5P52803 228 aa16.51■□□□□ 0.23
TIMP3-201ENST00000266085 IL9RQ01113 521 aa16.51■□□□□ 0.23
TIMP3-201ENST00000266085 CASP8Q14790 479 aa16.51■□□□□ 0.23
TIMP3-201ENST00000266085 RPUSD2Q8IZ73 545 aaKnown RBP16.51■□□□□ 0.23
TIMP3-201ENST00000266085 FBXL13Q8NEE6 735 aa16.51■□□□□ 0.23
TIMP3-201ENST00000266085 DIS3Q9Y2L1 958 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms