RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 UBE2TQ9NPD8 197 aaPredicted RBP17.64■□□□□ 0.41
CTCF-201ENST00000264010 SPATS2LQ9NUQ6 558 aaKnown RBP17.64■□□□□ 0.41
CTCF-201ENST00000264010 PGRMC1O00264 195 aaKnown RBP17.64■□□□□ 0.41
CTCF-201ENST00000264010 PJA2O43164 708 aa17.64■□□□□ 0.41
CTCF-201ENST00000264010 BUB1BO60566 1050 aaPredicted RBP17.64■□□□□ 0.41
CTCF-201ENST00000264010 SFNP31947 248 aa17.64■□□□□ 0.41
CTCF-201ENST00000264010 MMP14P50281 582 aa17.64■□□□□ 0.41
CTCF-201ENST00000264010 PPM1KQ8N3J5 372 aa17.64■□□□□ 0.41
CTCF-201ENST00000264010 RUBCNQ92622 972 aa17.64■□□□□ 0.41
CTCF-201ENST00000264010 CEP170P1Q96L14 293 aa17.64■□□□□ 0.41
CTCF-201ENST00000264010 EPB41L5Q9HCM4 733 aa17.64■□□□□ 0.41
CTCF-201ENST00000264010 RNF146Q9NTX7 359 aa17.64■□□□□ 0.41
CTCF-201ENST00000264010 VAV3Q9UKW4 847 aa17.64■□□□□ 0.41
CTCF-201ENST00000264010 SOX5P35711 763 aa17.64■□□□□ 0.41
CTCF-201ENST00000264010 MXI1P50539 228 aa17.64■□□□□ 0.41
CTCF-201ENST00000264010 MARSP56192 900 aaKnown RBP17.64■□□□□ 0.41
CTCF-201ENST00000264010 PSMC5P62195 406 aa17.64■□□□□ 0.41
CTCF-201ENST00000264010 STRN3Q13033 797 aa17.64■□□□□ 0.41
CTCF-201ENST00000264010 CLUL1Q15846 466 aa17.64■□□□□ 0.41
CTCF-201ENST00000264010 EMBQ6PCB8 327 aa17.64■□□□□ 0.41
CTCF-201ENST00000264010 CDHR1Q96JP9 859 aa17.64■□□□□ 0.41
CTCF-201ENST00000264010 KMT5AQ9NQR1 393 aa17.64■□□□□ 0.41
CTCF-201ENST00000264010 GRID2IPA4D2P6 1211 aa17.63■□□□□ 0.41
CTCF-201ENST00000264010 PSMD10O75832 226 aa17.63■□□□□ 0.41
CTCF-201ENST00000264010 MRPS25P82663 173 aaKnown RBP17.63■□□□□ 0.41
CTCF-201ENST00000264010 NBPF9Q3BBW0 867 aa17.63■□□□□ 0.41
CTCF-201ENST00000264010 CCNI2Q6ZMN8 369 aaPredicted RBP17.63■□□□□ 0.41
CTCF-201ENST00000264010 LRRC45Q96CN5 670 aa17.63■□□□□ 0.41
CTCF-201ENST00000264010 MPHOSPH6Q99547 160 aaKnown RBP17.63■□□□□ 0.41
CTCF-201ENST00000264010 LRRC1Q9BTT6 524 aa17.63■□□□□ 0.41
CTCF-201ENST00000264010 RPAP3Q9H6T3 665 aaPredicted RBP17.63■□□□□ 0.41
CTCF-201ENST00000264010 GINM1Q9NU53 330 aa17.63■□□□□ 0.41
CTCF-201ENST00000264010 H0YCG3 227 aa17.63■□□□□ 0.41
CTCF-201ENST00000264010 TBC1D12O60347 775 aa17.63■□□□□ 0.41
CTCF-201ENST00000264010 RNF40O75150 1001 aa17.63■□□□□ 0.41
CTCF-201ENST00000264010 KRT5P13647 590 aa17.63■□□□□ 0.41
CTCF-201ENST00000264010 GUCY2CP25092 1073 aa17.63■□□□□ 0.41
CTCF-201ENST00000264010 WDR44Q5JSH3 913 aa17.63■□□□□ 0.41
CTCF-201ENST00000264010 WDR18Q9BV38 432 aa17.63■□□□□ 0.41
CTCF-201ENST00000264010 STK33Q9BYT3 514 aa17.63■□□□□ 0.41
CTCF-201ENST00000264010 VIPAS39Q9H9C1 493 aa17.63■□□□□ 0.41
CTCF-201ENST00000264010 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.63■□□□□ 0.413e-34■■■■■ 819.8
CTCF-201ENST00000264010 AGPAT3Q9NRZ7 376 aa17.63■□□□□ 0.41
CTCF-201ENST00000264010 CETN2P41208 172 aa17.63■□□□□ 0.41
CTCF-201ENST00000264010 FBXW10Q5XX13 1052 aa17.63■□□□□ 0.41
CTCF-201ENST00000264010 KSR1Q8IVT5 923 aa17.63■□□□□ 0.41
CTCF-201ENST00000264010 SUGCTQ9HAC7 445 aa17.63■□□□□ 0.41
CTCF-201ENST00000264010 SCAF8Q9UPN6 1271 aaKnown RBP17.63■□□□□ 0.41
CTCF-201ENST00000264010 SASH3O75995 380 aa17.62■□□□□ 0.41
CTCF-201ENST00000264010 ZNF720Q7Z2F6 126 aa17.62■□□□□ 0.41
CTCF-201ENST00000264010 GSPT2Q8IYD1 628 aaKnown RBP17.62■□□□□ 0.41
CTCF-201ENST00000264010 HSD17B14Q9BPX1 270 aa17.62■□□□□ 0.41
CTCF-201ENST00000264010 GEMIN8Q9NWZ8 242 aaKnown RBP17.62■□□□□ 0.41
CTCF-201ENST00000264010 SPOPO43791 374 aa17.62■□□□□ 0.41
CTCF-201ENST00000264010 VAMP7P51809 220 aa17.62■□□□□ 0.41
CTCF-201ENST00000264010 GUCY2FP51841 1108 aa17.62■□□□□ 0.41
CTCF-201ENST00000264010 MTMR2Q13614 643 aa17.62■□□□□ 0.41
CTCF-201ENST00000264010 PRKG1Q13976 671 aa17.62■□□□□ 0.41
CTCF-201ENST00000264010 SEL1L2Q5TEA6 688 aa17.62■□□□□ 0.41
CTCF-201ENST00000264010 POMGNT1Q8WZA1 660 aa17.62■□□□□ 0.41
CTCF-201ENST00000264010 TIPINQ9BVW5 301 aa17.62■□□□□ 0.41
CTCF-201ENST00000264010 LCMT1Q9UIC8 334 aa17.62■□□□□ 0.41
CTCF-201ENST00000264010 UTP11Q9Y3A2 253 aaKnown RBP17.62■□□□□ 0.41
CTCF-201ENST00000264010 DLEC1Q9Y238 1755 aa17.62■□□□□ 0.41
CTCF-201ENST00000264010 CTNND1O60716 968 aaKnown RBP17.62■□□□□ 0.41
CTCF-201ENST00000264010 RFX1P22670 979 aa17.62■□□□□ 0.41
CTCF-201ENST00000264010 APBA1Q02410 837 aa17.62■□□□□ 0.41
CTCF-201ENST00000264010 BIRC3Q13489 604 aa17.62■□□□□ 0.41
CTCF-201ENST00000264010 HAUS6Q7Z4H7 955 aa17.62■□□□□ 0.41
CTCF-201ENST00000264010 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.62■□□□□ 0.41
CTCF-201ENST00000264010 DAAM1Q9Y4D1 1078 aa17.62■□□□□ 0.41
CTCF-201ENST00000264010 GTPBP10A4D1E9 387 aaKnown RBP17.61■□□□□ 0.41
CTCF-201ENST00000264010 RASSF10A6NK89 507 aa17.61■□□□□ 0.41
CTCF-201ENST00000264010 SLC16A4O15374 487 aa17.61■□□□□ 0.41
CTCF-201ENST00000264010 YWHABP31946 246 aaKnown RBP17.61■□□□□ 0.41
CTCF-201ENST00000264010 MFAP3P55082 362 aa17.61■□□□□ 0.41
CTCF-201ENST00000264010 PPP2R5EQ16537 467 aa17.61■□□□□ 0.41
CTCF-201ENST00000264010 C1orf186Q6ZWK4 172 aa17.61■□□□□ 0.41
CTCF-201ENST00000264010 PACSIN2Q9UNF0 486 aaPredicted RBP17.61■□□□□ 0.41
CTCF-201ENST00000264010 GOLGA8KD6RF30 607 aa17.61■□□□□ 0.41
CTCF-201ENST00000264010 PLA2G6O60733 806 aa17.61■□□□□ 0.41
CTCF-201ENST00000264010 GNGT1P63211 74 aa17.61■□□□□ 0.41
CTCF-201ENST00000264010 BFSP1Q12934 665 aa17.61■□□□□ 0.41
CTCF-201ENST00000264010 TKFCQ3LXA3 575 aa17.61■□□□□ 0.41
CTCF-201ENST00000264010 WDR78Q5VTH9 848 aa17.61■□□□□ 0.41
CTCF-201ENST00000264010 MTUS1Q9ULD2 1270 aa17.61■□□□□ 0.41
CTCF-201ENST00000264010 FAM170AA1A519 330 aa17.61■□□□□ 0.41
CTCF-201ENST00000264010 WNT10BO00744 389 aa17.61■□□□□ 0.41
CTCF-201ENST00000264010 ZBTB7AO95365 584 aa17.61■□□□□ 0.41
CTCF-201ENST00000264010 GCLMP48507 274 aa17.61■□□□□ 0.41
CTCF-201ENST00000264010 TADA2BQ86TJ2 420 aa17.61■□□□□ 0.41
CTCF-201ENST00000264010 WRNIP1Q96S55 665 aa17.61■□□□□ 0.41
CTCF-201ENST00000264010 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.61■□□□□ 0.41
CTCF-201ENST00000264010 NAGPAQ9UK23 515 aa17.61■□□□□ 0.41
CTCF-201ENST00000264010 FRMPD4Q14CM0 1322 aa17.6■□□□□ 0.41
CTCF-201ENST00000264010 NFIBO00712 420 aa17.6■□□□□ 0.41
CTCF-201ENST00000264010 ZNF263O14978 683 aa17.6■□□□□ 0.41
CTCF-201ENST00000264010 PSAPP07602 524 aa17.6■□□□□ 0.41
CTCF-201ENST00000264010 TTLL12Q14166 644 aaPredicted RBP17.6■□□□□ 0.41
CTCF-201ENST00000264010 BMT2Q1RMZ1 405 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms