RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 RINT1Q6NUQ1 792 aa20.78■□□□□ 0.92
CYSTM1-201ENST00000261811 LEO1Q8WVC0 666 aaPredicted RBP20.78■□□□□ 0.92
CYSTM1-201ENST00000261811 LARP4BQ92615 738 aaKnown RBP20.78■□□□□ 0.92
CYSTM1-201ENST00000261811 VWCEQ96DN2 955 aa20.78■□□□□ 0.92
CYSTM1-201ENST00000261811 AGO3Q9H9G7 860 aaKnown RBP20.78■□□□□ 0.92
CYSTM1-201ENST00000261811 CHMP5Q9NZZ3 219 aa20.78■□□□□ 0.92
CYSTM1-201ENST00000261811 PCDHA7Q9UN72 937 aa20.78■□□□□ 0.92
CYSTM1-201ENST00000261811 ST3GAL5Q9UNP4 418 aa20.78■□□□□ 0.92
CYSTM1-201ENST00000261811 DENND3A2RUS2 1198 aa20.77■□□□□ 0.91
CYSTM1-201ENST00000261811 KRT18P05783 430 aaKnown RBP20.77■□□□□ 0.91
CYSTM1-201ENST00000261811 ATP2A2P16615 1042 aaKnown RBP20.77■□□□□ 0.91
CYSTM1-201ENST00000261811 STAT6P42226 847 aa20.77■□□□□ 0.91
CYSTM1-201ENST00000261811 WDR5P61964 334 aaKnown RBP20.77■□□□□ 0.91
CYSTM1-201ENST00000261811 KCNK18Q7Z418 384 aa20.77■□□□□ 0.91
CYSTM1-201ENST00000261811 KSR1Q8IVT5 923 aa20.77■□□□□ 0.91
CYSTM1-201ENST00000261811 ZBTB8OSQ8IWT0 167 aa20.77■□□□□ 0.91
CYSTM1-201ENST00000261811 TMEM40Q8WWA1 233 aa20.77■□□□□ 0.91
CYSTM1-201ENST00000261811 RAD54LQ92698 747 aa20.77■□□□□ 0.91
CYSTM1-201ENST00000261811 ZNF668Q96K58 619 aaPredicted RBP20.77■□□□□ 0.91
CYSTM1-201ENST00000261811 C17orf75Q9HAS0 396 aa20.77■□□□□ 0.91
CYSTM1-201ENST00000261811 ERVK-5Q9HDB9 667 aa20.77■□□□□ 0.91
CYSTM1-201ENST00000261811 RBM19Q9Y4C8 960 aaKnown RBP20.77■□□□□ 0.91
CYSTM1-201ENST00000261811 TTC3P53804 2025 aa20.76■□□□□ 0.91
CYSTM1-201ENST00000261811 LRRIQ4A6NIV6 560 aa20.76■□□□□ 0.91
CYSTM1-201ENST00000261811 GUCY2CP25092 1073 aa20.76■□□□□ 0.91
CYSTM1-201ENST00000261811 SLC12A3P55017 1021 aa20.76■□□□□ 0.91
CYSTM1-201ENST00000261811 DHX8Q14562 1220 aaKnown RBP20.76■□□□□ 0.91
CYSTM1-201ENST00000261811 CSPP1Q1MSJ5 1256 aa20.76■□□□□ 0.91
CYSTM1-201ENST00000261811 USP49Q70CQ1 688 aa20.76■□□□□ 0.91
CYSTM1-201ENST00000261811 SV2BQ7L1I2 683 aa20.76■□□□□ 0.91
CYSTM1-201ENST00000261811 CATSPER4Q7RTX7 472 aa20.76■□□□□ 0.91
CYSTM1-201ENST00000261811 ZBED2Q9BTP6 218 aa20.76■□□□□ 0.91
CYSTM1-201ENST00000261811 LRRC27Q9C0I9 530 aa20.76■□□□□ 0.91
CYSTM1-201ENST00000261811 C2orf40Q9H1Z8 148 aa20.76■□□□□ 0.91
CYSTM1-201ENST00000261811 CUEDC2Q9H467 287 aa20.76■□□□□ 0.91
CYSTM1-201ENST00000261811 CXXC1Q9P0U4 656 aaPredicted RBP20.76■□□□□ 0.91
CYSTM1-201ENST00000261811 ERLIN2O94905 339 aa20.75■□□□□ 0.91
CYSTM1-201ENST00000261811 GLRA2P23416 452 aa20.75■□□□□ 0.91
CYSTM1-201ENST00000261811 NAMPTP43490 491 aa20.75■□□□□ 0.91
CYSTM1-201ENST00000261811 SMAD3P84022 425 aaKnown RBP20.75■□□□□ 0.91
CYSTM1-201ENST00000261811 ADALQ6DHV7 355 aa20.75■□□□□ 0.91
CYSTM1-201ENST00000261811 C1orf186Q6ZWK4 172 aa20.75■□□□□ 0.91
CYSTM1-201ENST00000261811 FAM228AQ86W67 206 aa20.75■□□□□ 0.91
CYSTM1-201ENST00000261811 GPBP1Q86WP2 473 aa20.75■□□□□ 0.91
CYSTM1-201ENST00000261811 IQUBQ8NA54 791 aa20.75■□□□□ 0.91
CYSTM1-201ENST00000261811 DEPTORQ8TB45 409 aa20.75■□□□□ 0.91
CYSTM1-201ENST00000261811 NFKBIZQ9BYH8 718 aa20.75■□□□□ 0.91
CYSTM1-201ENST00000261811 OSBPL7Q9BZF2 842 aa20.75■□□□□ 0.91
CYSTM1-201ENST00000261811 IFT122Q9HBG6 1241 aa20.75■□□□□ 0.91
CYSTM1-201ENST00000261811 GPRC5CQ9NQ84 441 aa20.75■□□□□ 0.91
CYSTM1-201ENST00000261811 CHST12Q9NRB3 414 aa20.75■□□□□ 0.91
CYSTM1-201ENST00000261811 C1orf112Q9NSG2 853 aa20.75■□□□□ 0.91
CYSTM1-201ENST00000261811 DACT1Q9NYF0 836 aa20.75■□□□□ 0.91
CYSTM1-201ENST00000261811 MSRAQ9UJ68 235 aa20.75■□□□□ 0.91
CYSTM1-201ENST00000261811 PHLPP2Q6ZVD8 1323 aa20.74■□□□□ 0.91
CYSTM1-201ENST00000261811 GOLGA6L4A6NEF3 574 aa20.74■□□□□ 0.91
CYSTM1-201ENST00000261811 HIP1RO75146 1068 aa20.74■□□□□ 0.91
CYSTM1-201ENST00000261811 PTENP60484 403 aa20.74■□□□□ 0.91
CYSTM1-201ENST00000261811 DMP1Q13316 513 aaPredicted RBP20.74■□□□□ 0.91
CYSTM1-201ENST00000261811 CAPSQ13938 189 aa20.74■□□□□ 0.91
CYSTM1-201ENST00000261811 MCM6Q14566 821 aa20.74■□□□□ 0.91
CYSTM1-201ENST00000261811 RAB30Q15771 203 aa20.74■□□□□ 0.91
CYSTM1-201ENST00000261811 AXDND1Q5T1B0 1012 aaPredicted RBP20.74■□□□□ 0.91
CYSTM1-201ENST00000261811 MYOCDQ8IZQ8 938 aa20.74■□□□□ 0.91
CYSTM1-201ENST00000261811 PDILTQ8N807 584 aa20.74■□□□□ 0.91
CYSTM1-201ENST00000261811 ASAP3Q8TDY4 903 aa20.74■□□□□ 0.91
CYSTM1-201ENST00000261811 RUSC1Q9BVN2 902 aa20.74■□□□□ 0.91
CYSTM1-201ENST00000261811 BLOC1S4Q9NUP1 217 aa20.74■□□□□ 0.91
CYSTM1-201ENST00000261811 ODF2LQ9ULJ1 636 aa20.74■□□□□ 0.91
CYSTM1-201ENST00000261811 INO80B-WBP1J3KQ70 363 aa20.73■□□□□ 0.91
CYSTM1-201ENST00000261811 ENPP3O14638 875 aa20.73■□□□□ 0.91
CYSTM1-201ENST00000261811 STAG3L1P0CL83 205 aa20.73■□□□□ 0.91
CYSTM1-201ENST00000261811 EFNA5P52803 228 aa20.73■□□□□ 0.91
CYSTM1-201ENST00000261811 SMTNP53814 917 aa20.73■□□□□ 0.91
CYSTM1-201ENST00000261811 AMPD3Q01432 767 aa20.73■□□□□ 0.91
CYSTM1-201ENST00000261811 RESP18Q5W5W9 173 aa20.73■□□□□ 0.91
CYSTM1-201ENST00000261811 SHC4Q6S5L8 630 aa20.73■□□□□ 0.91
CYSTM1-201ENST00000261811 IFNLR1Q8IU57 520 aaPredicted RBP20.73■□□□□ 0.91
CYSTM1-201ENST00000261811 IPO9Q96P70 1041 aaKnown RBP20.73■□□□□ 0.91
CYSTM1-201ENST00000261811 ADAM2Q99965 735 aa20.73■□□□□ 0.91
CYSTM1-201ENST00000261811 PANK2Q9BZ23 570 aa20.73■□□□□ 0.91
CYSTM1-201ENST00000261811 TSPYL2Q9H2G4 693 aaPredicted RBP20.73■□□□□ 0.91
CYSTM1-201ENST00000261811 LARSQ9P2J5 1176 aaKnown RBP20.73■□□□□ 0.91
CYSTM1-201ENST00000261811 LRFN2Q9ULH4 789 aa20.73■□□□□ 0.91
CYSTM1-201ENST00000261811 H0YCG3 227 aa20.72■□□□□ 0.91
CYSTM1-201ENST00000261811 SKIP12755 728 aa20.72■□□□□ 0.91
CYSTM1-201ENST00000261811 AXLP30530 894 aa20.72■□□□□ 0.91
CYSTM1-201ENST00000261811 SLC24A5Q71RS6 500 aa20.72■□□□□ 0.91
CYSTM1-201ENST00000261811 HERC6Q8IVU3 1022 aa20.72■□□□□ 0.91
CYSTM1-201ENST00000261811 MAGEF1Q9HAY2 307 aa20.72■□□□□ 0.91
CYSTM1-201ENST00000261811 TSHZ2Q9NRE2 1034 aa20.72■□□□□ 0.91
CYSTM1-201ENST00000261811 RGS18Q9NS28 235 aa20.72■□□□□ 0.91
CYSTM1-201ENST00000261811 CCDC169A6NNP5 214 aa20.71■□□□□ 0.91
CYSTM1-201ENST00000261811 TBCAO75347 108 aaKnown RBP20.71■□□□□ 0.91
CYSTM1-201ENST00000261811 SCP2P22307 547 aa20.71■□□□□ 0.91
CYSTM1-201ENST00000261811 CMA1P23946 247 aa20.71■□□□□ 0.91
CYSTM1-201ENST00000261811 RAD51AP2Q09MP3 1159 aa20.71■□□□□ 0.91
CYSTM1-201ENST00000261811 TCTN1Q2MV58 587 aa20.71■□□□□ 0.91
CYSTM1-201ENST00000261811 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.71■□□□□ 0.91
CYSTM1-201ENST00000261811 TOP1MTQ969P6 601 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms