RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 LRRC31Q6UY01 552 aa15.23■□□□□ 0.03
CUX2-201ENST00000261726 CUL1Q13616 776 aa15.23■□□□□ 0.03
CUX2-201ENST00000261726 ZNF699Q32M78 642 aa15.23■□□□□ 0.03
CUX2-201ENST00000261726 PATL1Q86TB9 770 aaKnown RBP15.23■□□□□ 0.03
CUX2-201ENST00000261726 DDIASQ8IXT1 998 aa15.23■□□□□ 0.03
CUX2-201ENST00000261726 IL17REQ8NFR9 667 aa15.23■□□□□ 0.03
CUX2-201ENST00000261726 SLC10A4Q96EP9 437 aa15.23■□□□□ 0.03
CUX2-201ENST00000261726 ASIC4Q96FT7 647 aa15.23■□□□□ 0.03
CUX2-201ENST00000261726 GPR101Q96P66 508 aaPredicted RBP15.23■□□□□ 0.03
CUX2-201ENST00000261726 ASPSCR1Q9BZE9 553 aa15.23■□□□□ 0.03
CUX2-201ENST00000261726 CNOT8Q9UFF9 292 aaKnown RBP15.23■□□□□ 0.03
CUX2-201ENST00000261726 MRFAP1Q9Y605 127 aa15.23■□□□□ 0.03
CUX2-201ENST00000261726 KIF24Q5T7B8 1368 aa15.22■□□□□ 0.03
CUX2-201ENST00000261726 CTIFO43310 598 aaKnown RBP15.22■□□□□ 0.03
CUX2-201ENST00000261726 SRGAP2O75044 1071 aa15.22■□□□□ 0.03
CUX2-201ENST00000261726 OR9Q1Q8NGQ5 310 aa15.22■□□□□ 0.03
CUX2-201ENST00000261726 AGR3Q8TD06 166 aa15.22■□□□□ 0.03
CUX2-201ENST00000261726 TRIM33Q9UPN9 1127 aa15.22■□□□□ 0.03
CUX2-201ENST00000261726 ADD2P35612 726 aa15.22■□□□□ 0.03
CUX2-201ENST00000261726 CLCN6P51797 869 aa15.22■□□□□ 0.03
CUX2-201ENST00000261726 TSPY1Q01534 308 aa15.22■□□□□ 0.03
CUX2-201ENST00000261726 TWF2Q6IBS0 349 aaKnown RBP15.22■□□□□ 0.03
CUX2-201ENST00000261726 SYNDIG1Q9H7V2 258 aa15.22■□□□□ 0.03
CUX2-201ENST00000261726 CYP4F11Q9HBI6 524 aa15.22■□□□□ 0.03
CUX2-201ENST00000261726 ASNSD1Q9NWL6 643 aa15.22■□□□□ 0.03
CUX2-201ENST00000261726 DNAJC12Q9UKB3 198 aa15.22■□□□□ 0.03
CUX2-201ENST00000261726 MAP3K4Q9Y6R4 1608 aa15.22■□□□□ 0.03
CUX2-201ENST00000261726 ANKRD65E5RJM6 399 aa15.22■□□□□ 0.03
CUX2-201ENST00000261726 EFCAB14O75071 495 aa15.22■□□□□ 0.03
CUX2-201ENST00000261726 SSTR3P32745 418 aaPredicted RBP15.22■□□□□ 0.03
CUX2-201ENST00000261726 ZC3H15Q8WU90 426 aaKnown RBP15.22■□□□□ 0.03
CUX2-201ENST00000261726 MOCS2O96007 188 aaPredicted RBP15.22■□□□□ 0.03
CUX2-201ENST00000261726 PDXDC1Q6P996 788 aa15.22■□□□□ 0.03
CUX2-201ENST00000261726 PI16Q6UXB8 463 aa15.22■□□□□ 0.03
CUX2-201ENST00000261726 MAP4K1Q92918 833 aa15.22■□□□□ 0.03
CUX2-201ENST00000261726 PPP1R36Q96LQ0 422 aa15.22■□□□□ 0.03
CUX2-201ENST00000261726 SLC13A1Q9BZW2 595 aa15.22■□□□□ 0.03
CUX2-201ENST00000261726 NNMTP40261 264 aa15.22■□□□□ 0.03
CUX2-201ENST00000261726 TJAP1Q5JTD0 557 aa15.22■□□□□ 0.03
CUX2-201ENST00000261726 LRRC37BQ96QE4 947 aa15.22■□□□□ 0.03
CUX2-201ENST00000261726 PCSK1NQ9UHG2 260 aa15.22■□□□□ 0.03
CUX2-201ENST00000261726 RNF17Q9BXT8 1623 aaKnown RBP15.21■□□□□ 0.03
CUX2-201ENST00000261726 FAM182BQ5T319 152 aa15.21■□□□□ 0.03
CUX2-201ENST00000261726 ZNF668Q96K58 619 aaPredicted RBP15.21■□□□□ 0.03
CUX2-201ENST00000261726 SP110Q9HB58 689 aa15.21■□□□□ 0.03
CUX2-201ENST00000261726 NOP53Q9NZM5 478 aaKnown RBP15.21■□□□□ 0.03
CUX2-201ENST00000261726 PI4KBQ9UBF8 816 aa15.21■□□□□ 0.03
CUX2-201ENST00000261726 ASAP1Q9ULH1 1129 aa15.21■□□□□ 0.03
CUX2-201ENST00000261726 KIAA0232Q92628 1395 aa15.21■□□□□ 0.03
CUX2-201ENST00000261726 SH2B2O14492 632 aaPredicted RBP15.21■□□□□ 0.03
CUX2-201ENST00000261726 TMEM270Q6UE05 265 aa15.21■□□□□ 0.03
CUX2-201ENST00000261726 RRM2BQ7LG56 351 aa15.21■□□□□ 0.03
CUX2-201ENST00000261726 VSTM4Q8IW00 320 aa15.21■□□□□ 0.03
CUX2-201ENST00000261726 MTBPQ96DY7 904 aa15.21■□□□□ 0.03
CUX2-201ENST00000261726 PUS7LQ9H0K6 701 aaKnown RBP15.21■□□□□ 0.03
CUX2-201ENST00000261726 PIDD1Q9HB75 910 aa15.21■□□□□ 0.03
CUX2-201ENST00000261726 INO80Q9ULG1 1556 aaPredicted RBP15.21■□□□□ 0.03
CUX2-201ENST00000261726 CLCA2Q9UQC9 943 aa15.21■□□□□ 0.03
CUX2-201ENST00000261726 CAMSAP1Q5T5Y3 1602 aa15.21■□□□□ 0.03
CUX2-201ENST00000261726 UBE4BO95155 1302 aa15.21■□□□□ 0.03
CUX2-201ENST00000261726 E9PMD0 336 aa15.21■□□□□ 0.03
CUX2-201ENST00000261726 hCG_1984214I3L0E3 225 aa15.21■□□□□ 0.03
CUX2-201ENST00000261726 KRT38O76015 456 aa15.21■□□□□ 0.03
CUX2-201ENST00000261726 TTC23LQ6PF05 361 aa15.21■□□□□ 0.03
CUX2-201ENST00000261726 RHOT2Q8IXI1 618 aa15.21■□□□□ 0.03
CUX2-201ENST00000261726 PPM1NQ8N819 430 aa15.21■□□□□ 0.03
CUX2-201ENST00000261726 ZNF713Q8N859 430 aaPredicted RBP15.21■□□□□ 0.03
CUX2-201ENST00000261726 RFWD2Q8NHY2 731 aa15.21■□□□□ 0.03
CUX2-201ENST00000261726 BTN2A2Q8WVV5 523 aa15.21■□□□□ 0.03
CUX2-201ENST00000261726 MYOM2P54296 1465 aa15.21■□□□□ 0.03
CUX2-201ENST00000261726 CLDN3O15551 220 aa15.21■□□□□ 0.03
CUX2-201ENST00000261726 HUS1O60921 280 aa15.21■□□□□ 0.03
CUX2-201ENST00000261726 PDCLQ13371 301 aa15.21■□□□□ 0.03
CUX2-201ENST00000261726 SEPT2Q15019 361 aa15.21■□□□□ 0.03
CUX2-201ENST00000261726 YIPF2Q9BWQ6 316 aa15.21■□□□□ 0.03
CUX2-201ENST00000261726 hCG_2014768A0A024R1R8 64 aa15.21■□□□□ 0.02
CUX2-201ENST00000261726 PNMA6FA0A0J9YX94 578 aa15.21■□□□□ 0.02
CUX2-201ENST00000261726 M0QYV0 167 aa15.21■□□□□ 0.02
CUX2-201ENST00000261726 SMARCA1P28370 1054 aa15.21■□□□□ 0.02
CUX2-201ENST00000261726 KRT31Q15323 416 aa15.21■□□□□ 0.02
CUX2-201ENST00000261726 UNC5CLQ8IV45 518 aa15.21■□□□□ 0.02
CUX2-201ENST00000261726 GSPT2Q8IYD1 628 aaKnown RBP15.21■□□□□ 0.02
CUX2-201ENST00000261726 RNF25Q96BH1 459 aaPredicted RBP15.21■□□□□ 0.02
CUX2-201ENST00000261726 ATXN7L3BQ96GX2 97 aa15.21■□□□□ 0.02
CUX2-201ENST00000261726 PAWRQ96IZ0 340 aaKnown RBP15.21■□□□□ 0.02
CUX2-201ENST00000261726 ZNF568Q3ZCX4 644 aa15.2■□□□□ 0.02
CUX2-201ENST00000261726 LRRC8EQ6NSJ5 796 aa15.2■□□□□ 0.02
CUX2-201ENST00000261726 FAM196AQ6ZSG2 479 aa15.2■□□□□ 0.02
CUX2-201ENST00000261726 LINC00301Q8NCQ3 95 aa15.2■□□□□ 0.02
CUX2-201ENST00000261726 CIAO1O76071 339 aa15.2■□□□□ 0.02
CUX2-201ENST00000261726 GPC3P51654 580 aa15.2■□□□□ 0.02
CUX2-201ENST00000261726 PROSER3Q2NL68 480 aa15.2■□□□□ 0.02
CUX2-201ENST00000261726 PJA2O43164 708 aa15.2■□□□□ 0.02
CUX2-201ENST00000261726 LDHAP00338 332 aaKnown RBP15.2■□□□□ 0.02
CUX2-201ENST00000261726 RBM41Q96IZ5 413 aaKnown RBP15.2■□□□□ 0.02
CUX2-201ENST00000261726 FAM213AQ9BRX8 229 aa15.2■□□□□ 0.02
CUX2-201ENST00000261726 MAGI2Q86UL8 1455 aa15.2■□□□□ 0.02
CUX2-201ENST00000261726 PODXLO00592 558 aa15.2■□□□□ 0.02
CUX2-201ENST00000261726 AIFM3Q96NN9 605 aa15.2■□□□□ 0.02
CUX2-201ENST00000261726 ATP6V0A4Q9HBG4 840 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms