RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 COA1Q9GZY4 146 aa17.49■□□□□ 0.39
SNCAIP-202ENST00000261368 GAKO14976 1311 aa17.49■□□□□ 0.39
SNCAIP-202ENST00000261368 IGSF9BQ9UPX0 1349 aa17.49■□□□□ 0.39
SNCAIP-202ENST00000261368 CCDC88AQ3V6T2 1871 aa17.49■□□□□ 0.39
SNCAIP-202ENST00000261368 FRMD3A2A2Y4 597 aa17.49■□□□□ 0.39
SNCAIP-202ENST00000261368 F8VZ95 297 aa17.49■□□□□ 0.39
SNCAIP-202ENST00000261368 EYA4O95677 639 aa17.49■□□□□ 0.39
SNCAIP-202ENST00000261368 FOSP01100 380 aaPredicted RBP17.49■□□□□ 0.39
SNCAIP-202ENST00000261368 HOXA7P31268 230 aaPredicted RBP17.49■□□□□ 0.39
SNCAIP-202ENST00000261368 SLC29A2Q14542 456 aa17.49■□□□□ 0.39
SNCAIP-202ENST00000261368 NBPF9Q3BBW0 867 aa17.49■□□□□ 0.39
SNCAIP-202ENST00000261368 CCDC197Q8NCU1 140 aa17.49■□□□□ 0.39
SNCAIP-202ENST00000261368 HVCN1Q96D96 273 aa17.49■□□□□ 0.39
SNCAIP-202ENST00000261368 FAM163AQ96GL9 167 aaPredicted RBP17.49■□□□□ 0.39
SNCAIP-202ENST00000261368 BTBD6Q96KE9 485 aa17.49■□□□□ 0.39
SNCAIP-202ENST00000261368 CCDC169A6NNP5 214 aa17.48■□□□□ 0.39
SNCAIP-202ENST00000261368 ZKSCAN8Q15776 578 aaPredicted RBP17.48■□□□□ 0.39
SNCAIP-202ENST00000261368 JAMLQ86YT9 394 aa17.48■□□□□ 0.39
SNCAIP-202ENST00000261368 FAM20AQ96MK3 541 aa17.48■□□□□ 0.39
SNCAIP-202ENST00000261368 DBR1Q9UK59 544 aaKnown RBP17.48■□□□□ 0.39
SNCAIP-202ENST00000261368 ALG6Q9Y672 507 aa17.48■□□□□ 0.39
SNCAIP-202ENST00000261368 RPSAP08865 295 aaKnown RBP17.48■□□□□ 0.39
SNCAIP-202ENST00000261368 GAP43P17677 238 aa17.48■□□□□ 0.39
SNCAIP-202ENST00000261368 HOXD13P35453 343 aa17.48■□□□□ 0.39
SNCAIP-202ENST00000261368 SNCBQ16143 134 aa17.48■□□□□ 0.39
SNCAIP-202ENST00000261368 STK33Q9BYT3 514 aa17.48■□□□□ 0.39
SNCAIP-202ENST00000261368 PI4KBQ9UBF8 816 aa17.48■□□□□ 0.39
SNCAIP-202ENST00000261368 USP21Q9UK80 565 aa17.48■□□□□ 0.39
SNCAIP-202ENST00000261368 MTUS1Q9ULD2 1270 aa17.48■□□□□ 0.39
SNCAIP-202ENST00000261368 UBAP1LF5GYI3 381 aa17.48■□□□□ 0.39
SNCAIP-202ENST00000261368 MARSP56192 900 aaKnown RBP17.48■□□□□ 0.39
SNCAIP-202ENST00000261368 RPUSD2Q8IZ73 545 aaKnown RBP17.48■□□□□ 0.39
SNCAIP-202ENST00000261368 ERP44Q9BS26 406 aa17.48■□□□□ 0.39
SNCAIP-202ENST00000261368 ZNF577Q9BSK1 485 aa17.48■□□□□ 0.39
SNCAIP-202ENST00000261368 ERVK-5Q9HDB9 667 aa17.48■□□□□ 0.39
SNCAIP-202ENST00000261368 ACP6Q9NPH0 428 aa17.48■□□□□ 0.39
SNCAIP-202ENST00000261368 ATF5Q9Y2D1 282 aaPredicted RBP17.48■□□□□ 0.39
SNCAIP-202ENST00000261368 TISP43B9A030 160 aa17.47■□□□□ 0.39
SNCAIP-202ENST00000261368 KRT5P13647 590 aa17.47■□□□□ 0.39
SNCAIP-202ENST00000261368 KIAA1755Q5JYT7 1200 aa17.47■□□□□ 0.39
SNCAIP-202ENST00000261368 MRRFQ96E11 262 aaKnown RBP17.47■□□□□ 0.39
SNCAIP-202ENST00000261368 CHMP6Q96FZ7 201 aa17.47■□□□□ 0.39
SNCAIP-202ENST00000261368 TDRD3Q9H7E2 651 aaKnown RBP17.47■□□□□ 0.39
SNCAIP-202ENST00000261368 EMSYQ7Z589 1322 aa17.47■□□□□ 0.39
SNCAIP-202ENST00000261368 GOLGB1Q14789 3259 aaKnown RBP17.47■□□□□ 0.39
SNCAIP-202ENST00000261368 CNPY4Q8N129 248 aa17.47■□□□□ 0.39
SNCAIP-202ENST00000261368 VCPKMTQ9H867 229 aa17.47■□□□□ 0.39
SNCAIP-202ENST00000261368 LRRC4CQ9HCJ2 640 aa17.47■□□□□ 0.39
SNCAIP-202ENST00000261368 HOMER2Q9NSB8 354 aa17.47■□□□□ 0.39
SNCAIP-202ENST00000261368 MARCKSL1P49006 195 aa17.47■□□□□ 0.39
SNCAIP-202ENST00000261368 HYIQ5T013 277 aa17.47■□□□□ 0.39
SNCAIP-202ENST00000261368 TBC1D1Q86TI0 1168 aaPredicted RBP17.47■□□□□ 0.39
SNCAIP-202ENST00000261368 CCDC50Q8IVM0 306 aa17.47■□□□□ 0.39
SNCAIP-202ENST00000261368 SUGP1Q8IWZ8 645 aaKnown RBP17.47■□□□□ 0.39
SNCAIP-202ENST00000261368 ETNPPLQ8TBG4 499 aa17.47■□□□□ 0.39
SNCAIP-202ENST00000261368 KRT35Q92764 455 aa17.47■□□□□ 0.39
SNCAIP-202ENST00000261368 XPO6Q96QU8 1125 aaKnown RBP17.47■□□□□ 0.39
SNCAIP-202ENST00000261368 P2RX7Q99572 595 aaKnown RBP17.47■□□□□ 0.39
SNCAIP-202ENST00000261368 APEX2Q9UBZ4 518 aa17.47■□□□□ 0.39
SNCAIP-202ENST00000261368 TGFB1I1O43294 461 aa17.46■□□□□ 0.39
SNCAIP-202ENST00000261368 TRAPPC3O43617 180 aa17.46■□□□□ 0.39
SNCAIP-202ENST00000261368 EZRP15311 586 aaKnown RBP17.46■□□□□ 0.39
SNCAIP-202ENST00000261368 IFI35P80217 286 aaPredicted RBP17.46■□□□□ 0.39
SNCAIP-202ENST00000261368 PRPF38AQ8NAV1 312 aaKnown RBP17.46■□□□□ 0.39
SNCAIP-202ENST00000261368 DCAF4Q8WV16 495 aa17.46■□□□□ 0.39
SNCAIP-202ENST00000261368 PRMT1Q99873 361 aaKnown RBP17.46■□□□□ 0.39
SNCAIP-202ENST00000261368 SEMA4AQ9H3S1 761 aa17.46■□□□□ 0.39
SNCAIP-202ENST00000261368 TBK1Q9UHD2 729 aa17.46■□□□□ 0.39
SNCAIP-202ENST00000261368 IRS2Q9Y4H2 1338 aa17.46■□□□□ 0.39
SNCAIP-202ENST00000261368 POLD1P28340 1107 aa17.46■□□□□ 0.39
SNCAIP-202ENST00000261368 GBP2P32456 591 aaPredicted RBP17.46■□□□□ 0.39
SNCAIP-202ENST00000261368 CCDC137Q6PK04 289 aaKnown RBP17.46■□□□□ 0.39
SNCAIP-202ENST00000261368 EPS8L3Q8TE67 593 aaKnown RBP17.46■□□□□ 0.39
SNCAIP-202ENST00000261368 CHUKO15111 745 aa17.46■□□□□ 0.39
SNCAIP-202ENST00000261368 TMEM253P0C7T8 217 aa17.46■□□□□ 0.39
SNCAIP-202ENST00000261368 CPXCR1Q8N123 301 aa17.46■□□□□ 0.39
SNCAIP-202ENST00000261368 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.46■□□□□ 0.39
SNCAIP-202ENST00000261368 ALG3Q92685 438 aa17.46■□□□□ 0.39
SNCAIP-202ENST00000261368 TCP10L2B9ZVM9 353 aa17.45■□□□□ 0.38
SNCAIP-202ENST00000261368 RASGRF2O14827 1237 aa17.45■□□□□ 0.38
SNCAIP-202ENST00000261368 SLC16A3O15427 465 aaKnown RBP17.45■□□□□ 0.38
SNCAIP-202ENST00000261368 FSBPO95073 299 aa17.45■□□□□ 0.38
SNCAIP-202ENST00000261368 PRKCIP41743 596 aa17.45■□□□□ 0.38
SNCAIP-202ENST00000261368 SP4Q02446 784 aa17.45■□□□□ 0.38
SNCAIP-202ENST00000261368 GDAP1Q8TB36 358 aa17.45■□□□□ 0.38
SNCAIP-202ENST00000261368 ZNF653Q96CK0 615 aa17.45■□□□□ 0.38
SNCAIP-202ENST00000261368 AGPAT1Q99943 283 aa17.45■□□□□ 0.38
SNCAIP-202ENST00000261368 SIX2Q9NPC8 291 aa17.45■□□□□ 0.38
SNCAIP-202ENST00000261368 GYS1P13807 737 aa17.45■□□□□ 0.38
SNCAIP-202ENST00000261368 ECHS1P30084 290 aa17.45■□□□□ 0.38
SNCAIP-202ENST00000261368 AGBL2Q5U5Z8 902 aa17.45■□□□□ 0.38
SNCAIP-202ENST00000261368 CSRNP1Q96S65 589 aa17.45■□□□□ 0.38
SNCAIP-202ENST00000261368 NCAPGQ9BPX3 1015 aa17.45■□□□□ 0.38
SNCAIP-202ENST00000261368 AGPAT3Q9NRZ7 376 aa17.45■□□□□ 0.38
SNCAIP-202ENST00000261368 TMEM59LQ9UK28 342 aa17.45■□□□□ 0.38
SNCAIP-202ENST00000261368 PHLPP1O60346 1717 aa17.45■□□□□ 0.38
SNCAIP-202ENST00000261368 POLR2MP0CAP2 368 aa17.45■□□□□ 0.38
SNCAIP-202ENST00000261368 EIF3BP55884 814 aaKnown RBP17.45■□□□□ 0.38
SNCAIP-202ENST00000261368 C1orf54Q8WWF1 131 aa17.45■□□□□ 0.38
SNCAIP-202ENST00000261368 ACTR5Q9H9F9 607 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms