RNA–Protein interactions for RNA: ENST00000260383.11

TUBGCP4-201, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUBGCP4, Length 2,617 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-201ENST00000260383 FOXN2P32314 431 aa14.33□□□□□ -0.12
TUBGCP4-201ENST00000260383 PSMC4P43686 418 aa14.33□□□□□ -0.12
TUBGCP4-201ENST00000260383 C10orf76Q5T2E6 689 aa14.33□□□□□ -0.12
TUBGCP4-201ENST00000260383 SNX30Q5VWJ9 437 aa14.33□□□□□ -0.12
TUBGCP4-201ENST00000260383 SPATA31D4Q6ZUB0 917 aa14.33□□□□□ -0.12
TUBGCP4-201ENST00000260383 RBM46Q8TBY0 533 aaKnown RBP14.33□□□□□ -0.12
TUBGCP4-201ENST00000260383 LRRC8CQ8TDW0 803 aa14.33□□□□□ -0.12
TUBGCP4-201ENST00000260383 SH3RF3Q8TEJ3 882 aaPredicted RBP14.33□□□□□ -0.12
TUBGCP4-201ENST00000260383 PTPRN2Q92932 1015 aa14.33□□□□□ -0.12
TUBGCP4-201ENST00000260383 AZIN2Q96A70 460 aa14.33□□□□□ -0.12
TUBGCP4-201ENST00000260383 DTNBP1Q96EV8 351 aa14.33□□□□□ -0.12
TUBGCP4-201ENST00000260383 CTTNBP2NLQ9P2B4 639 aa14.33□□□□□ -0.12
TUBGCP4-201ENST00000260383 AMFRQ9UKV5 643 aa14.33□□□□□ -0.12
TUBGCP4-201ENST00000260383 TTC7AQ9ULT0 858 aaPredicted RBP14.33□□□□□ -0.12
TUBGCP4-201ENST00000260383 TJP3O95049 919 aa14.32□□□□□ -0.12
TUBGCP4-201ENST00000260383 GSTA2P09210 222 aa14.32□□□□□ -0.12
TUBGCP4-201ENST00000260383 OR52Z1P0C646 297 aa14.32□□□□□ -0.12
TUBGCP4-201ENST00000260383 STX2P32856 288 aa14.32□□□□□ -0.12
TUBGCP4-201ENST00000260383 VHLP40337 213 aa14.32□□□□□ -0.12
TUBGCP4-201ENST00000260383 PTGIRP43119 386 aa14.32□□□□□ -0.12
TUBGCP4-201ENST00000260383 FKBP3Q00688 224 aaKnown RBP14.32□□□□□ -0.12
TUBGCP4-201ENST00000260383 GRB10Q13322 594 aa14.32□□□□□ -0.12
TUBGCP4-201ENST00000260383 LETM2Q2VYF4 491 aa14.32□□□□□ -0.12
TUBGCP4-201ENST00000260383 CNPY1Q3B7I2 92 aa14.32□□□□□ -0.12
TUBGCP4-201ENST00000260383 CERKLQ49MI3 558 aaPredicted RBP14.32□□□□□ -0.12
TUBGCP4-201ENST00000260383 GATA6Q92908 595 aa14.32□□□□□ -0.12
TUBGCP4-201ENST00000260383 NAP1L3Q99457 506 aaPredicted RBP14.32□□□□□ -0.12
TUBGCP4-201ENST00000260383 TSG101Q99816 390 aa14.32□□□□□ -0.12
TUBGCP4-201ENST00000260383 PITPNM3Q9BZ71 974 aa14.32□□□□□ -0.12
TUBGCP4-201ENST00000260383 PDLIM1O00151 329 aa14.32□□□□□ -0.12
TUBGCP4-201ENST00000260383 CCNT1O60563 726 aaKnown RBP14.32□□□□□ -0.12
TUBGCP4-201ENST00000260383 ACSL3O95573 720 aa14.32□□□□□ -0.12
TUBGCP4-201ENST00000260383 ZCWPW2Q504Y3 356 aa14.32□□□□□ -0.12
TUBGCP4-201ENST00000260383 WASHC2DQ5SRD0 308 aa14.32□□□□□ -0.12
TUBGCP4-201ENST00000260383 TRIM59Q8IWR1 403 aa14.32□□□□□ -0.12
TUBGCP4-201ENST00000260383 TIPINQ9BVW5 301 aa14.32□□□□□ -0.12
TUBGCP4-201ENST00000260383 PLA2G12BQ9BX93 195 aa14.32□□□□□ -0.12
TUBGCP4-201ENST00000260383 DCLRE1BQ9H816 532 aa14.32□□□□□ -0.12
TUBGCP4-201ENST00000260383 TBC1D7Q9P0N9 293 aa14.32□□□□□ -0.12
TUBGCP4-201ENST00000260383 ARMCX3Q9UH62 379 aaPredicted RBP14.32□□□□□ -0.12
TUBGCP4-201ENST00000260383 PHRF1Q9P1Y6 1649 aaKnown RBP14.32□□□□□ -0.12
TUBGCP4-201ENST00000260383 MEGF6O75095 1541 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 FAM187AA6NFU0 413 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 H2AFZP0C0S5 128 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 UBTFL6P0CB48 400 aaPredicted RBP14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 BRAFP15056 766 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 TAC1P20366 129 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 CYP7A1P22680 504 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 MAGEA10P43363 369 aaPredicted RBP14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 DRG2P55039 364 aaKnown RBP14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 INHBCP55103 352 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 TMEM62Q0P6H9 643 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 ACVR2BQ13705 512 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 GIT2Q14161 759 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 CCDC152Q4G0S7 254 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 DPY19L2P1Q6NXN4 242 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 TTC27Q6P3X3 843 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 H2AFVQ71UI9 128 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 CADPS2Q86UW7 1296 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 ZDHHC14Q8IZN3 488 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 CYP4X1Q8N118 509 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 ZBTB38Q8NAP3 1195 aaPredicted RBP14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 AK8Q96MA6 479 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 GBP5Q96PP8 586 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 PNMA5Q96PV4 448 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 TMOD4Q9NZQ9 345 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 LRP2BPQ9P2M1 347 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 ATXN10Q9UBB4 475 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 AJAP1Q9UKB5 411 aaPredicted RBP14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 CCDC88AQ3V6T2 1871 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 PVALEFA0A1B0GWK0 134 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 ZCCHC18P0CG32 403 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 RARGP13631 454 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 ETS2P15036 469 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 FGFR2P21802 821 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 POLGP54098 1239 aaPredicted RBP14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 RASIP1Q5U651 963 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 CROCCP2Q86T23 111 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 MYLK4Q86YV6 388 aaPredicted RBP14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 NELFCDQ8IXH7 590 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 SPOCK2Q92563 424 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 INPP5DQ92835 1189 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 ZNF232Q9UNY5 417 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 PCDHA3Q9Y5H8 950 aa14.31□□□□□ -0.12
TUBGCP4-201ENST00000260383 DDX3XO00571 662 aaKnown RBP eCLIP14.3□□□□□ -0.122e-6■■■■■ 31.8
TUBGCP4-201ENST00000260383 BCAMP50895 628 aa14.3□□□□□ -0.12
TUBGCP4-201ENST00000260383 SETDB1Q15047 1291 aa14.3□□□□□ -0.12
TUBGCP4-201ENST00000260383 PUM3Q15397 648 aaKnown RBP14.3□□□□□ -0.12
TUBGCP4-201ENST00000260383 CCDC6Q16204 474 aa14.3□□□□□ -0.12
TUBGCP4-201ENST00000260383 DSTYKQ6XUX3 929 aa14.3□□□□□ -0.12
TUBGCP4-201ENST00000260383 KCNK18Q7Z418 384 aa14.3□□□□□ -0.12
TUBGCP4-201ENST00000260383 KSR1Q8IVT5 923 aa14.3□□□□□ -0.12
TUBGCP4-201ENST00000260383 SYCE1Q8N0S2 351 aa14.3□□□□□ -0.12
TUBGCP4-201ENST00000260383 U2AF1L4Q8WU68 220 aaKnown RBP14.3□□□□□ -0.12
TUBGCP4-201ENST00000260383 ALG3Q92685 438 aa14.3□□□□□ -0.12
TUBGCP4-201ENST00000260383 DDX12PQ92771 950 aa14.3□□□□□ -0.12
TUBGCP4-201ENST00000260383 LRRC37BQ96QE4 947 aa14.3□□□□□ -0.12
TUBGCP4-201ENST00000260383 STOML1Q9UBI4 398 aa14.3□□□□□ -0.12
TUBGCP4-201ENST00000260383 NENFQ9UMX5 172 aa14.3□□□□□ -0.12
TUBGCP4-201ENST00000260383 IGSF9BQ9UPX0 1349 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms