RNA–Protein interactions for RNA: ENST00000259239.7

IMP4-201, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IMP4, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-201ENST00000259239 PPP1R13LQ8WUF5 828 aa19.59■□□□□ 0.73
IMP4-201ENST00000259239 UPF3AQ9H1J1 476 aaKnown RBP19.59■□□□□ 0.73
IMP4-201ENST00000259239 TRAF3IP3Q9Y228 551 aa19.59■□□□□ 0.73
IMP4-201ENST00000259239 TRIM17Q9Y577 477 aa19.59■□□□□ 0.73
IMP4-201ENST00000259239 TGFB1I1O43294 461 aa19.58■□□□□ 0.72
IMP4-201ENST00000259239 CALUO43852 315 aaPredicted RBP19.58■□□□□ 0.72
IMP4-201ENST00000259239 CLCN3P51790 818 aa19.58■□□□□ 0.72
IMP4-201ENST00000259239 UBASH3AP57075 661 aa19.58■□□□□ 0.72
IMP4-201ENST00000259239 FKBP3Q00688 224 aaKnown RBP19.58■□□□□ 0.72
IMP4-201ENST00000259239 SPAG1Q07617 926 aa19.58■□□□□ 0.72
IMP4-201ENST00000259239 MFSD10Q14728 455 aa19.58■□□□□ 0.72
IMP4-201ENST00000259239 KRT31Q15323 416 aa19.58■□□□□ 0.72
IMP4-201ENST00000259239 GRIK4Q16099 956 aa19.58■□□□□ 0.72
IMP4-201ENST00000259239 EDRF1Q3B7T1 1238 aa19.58■□□□□ 0.72
IMP4-201ENST00000259239 IER5Q5VY09 327 aa19.58■□□□□ 0.72
IMP4-201ENST00000259239 APTXQ7Z2E3 356 aaKnown RBP19.58■□□□□ 0.72
IMP4-201ENST00000259239 METTL13Q8N6R0 699 aa19.58■□□□□ 0.72
IMP4-201ENST00000259239 TCP11Q8WWU5 503 aa19.58■□□□□ 0.72
IMP4-201ENST00000259239 MRFAP1L1Q96HT8 127 aa19.58■□□□□ 0.72
IMP4-201ENST00000259239 CNOT6LQ96LI5 555 aaKnown RBP19.58■□□□□ 0.72
IMP4-201ENST00000259239 NAP1L5Q96NT1 182 aaPredicted RBP19.58■□□□□ 0.72
IMP4-201ENST00000259239 PPP1R9BQ96SB3 815 aa19.58■□□□□ 0.72
IMP4-201ENST00000259239 JPH2Q9BR39 696 aaPredicted RBP19.58■□□□□ 0.72
IMP4-201ENST00000259239 NTPCRQ9BSD7 190 aaKnown RBP19.58■□□□□ 0.72
IMP4-201ENST00000259239 DENND3A2RUS2 1198 aa19.57■□□□□ 0.72
IMP4-201ENST00000259239 LRRIQ4A6NIV6 560 aa19.57■□□□□ 0.72
IMP4-201ENST00000259239 KLRC1P26715 233 aa19.57■□□□□ 0.72
IMP4-201ENST00000259239 PSEN2P49810 448 aa19.57■□□□□ 0.72
IMP4-201ENST00000259239 PRMT2P55345 433 aa19.57■□□□□ 0.72
IMP4-201ENST00000259239 CAPSQ13938 189 aa19.57■□□□□ 0.72
IMP4-201ENST00000259239 PPP2R5AQ15172 486 aa19.57■□□□□ 0.72
IMP4-201ENST00000259239 EFCAB12Q6NXP0 572 aa19.57■□□□□ 0.72
IMP4-201ENST00000259239 SYCP3Q8IZU3 236 aa19.57■□□□□ 0.72
IMP4-201ENST00000259239 SLAIN1Q8ND83 568 aa19.57■□□□□ 0.72
IMP4-201ENST00000259239 PRPF31Q8WWY3 499 aaKnown RBP19.57■□□□□ 0.72
IMP4-201ENST00000259239 ACCSQ96QU6 501 aa19.57■□□□□ 0.72
IMP4-201ENST00000259239 XPNPEP3Q9NQH7 507 aa19.57■□□□□ 0.72
IMP4-201ENST00000259239 WBP1LQ9NX94 342 aa19.57■□□□□ 0.72
IMP4-201ENST00000259239 MAGEC2Q9UBF1 373 aaPredicted RBP19.57■□□□□ 0.72
IMP4-201ENST00000259239 LIMA1Q9UHB6 759 aaKnown RBP19.57■□□□□ 0.72
IMP4-201ENST00000259239 PTCH2Q9Y6C5 1203 aa19.57■□□□□ 0.72
IMP4-201ENST00000259239 CLIC2O15247 247 aa19.56■□□□□ 0.72
IMP4-201ENST00000259239 INHAP05111 366 aa19.56■□□□□ 0.72
IMP4-201ENST00000259239 SMIM10L2AP0DMW4 78 aa19.56■□□□□ 0.72
IMP4-201ENST00000259239 SMIM10L2BP0DMW5 78 aa19.56■□□□□ 0.72
IMP4-201ENST00000259239 NR2F2P24468 414 aa19.56■□□□□ 0.72
IMP4-201ENST00000259239 EEF1GP26641 437 aaKnown RBP19.56■□□□□ 0.72
IMP4-201ENST00000259239 NAMPTP43490 491 aa19.56■□□□□ 0.72
IMP4-201ENST00000259239 PURAQ00577 322 aaKnown RBP19.56■□□□□ 0.72
IMP4-201ENST00000259239 GNASQ5JWF2 1037 aa19.56■□□□□ 0.72
IMP4-201ENST00000259239 FAM114A1Q8IWE2 563 aa19.56■□□□□ 0.72
IMP4-201ENST00000259239 ZC3H3Q8IXZ2 948 aaKnown RBP19.56■□□□□ 0.72
IMP4-201ENST00000259239 RETREG2Q8NC44 543 aa19.56■□□□□ 0.72
IMP4-201ENST00000259239 PSPC1Q8WXF1 523 aaKnown RBP19.56■□□□□ 0.72
IMP4-201ENST00000259239 GBP3Q9H0R5 595 aa19.56■□□□□ 0.72
IMP4-201ENST00000259239 SPC25Q9HBM1 224 aa19.56■□□□□ 0.72
IMP4-201ENST00000259239 ARHGAP28Q9P2N2 729 aa19.56■□□□□ 0.72
IMP4-201ENST00000259239 TBX20Q9UMR3 447 aa19.56■□□□□ 0.72
IMP4-201ENST00000259239 CBFA2T2O43439 604 aa19.56■□□□□ 0.72
IMP4-201ENST00000259239 ADAMTS4O75173 837 aa19.56■□□□□ 0.72
IMP4-201ENST00000259239 FGFR1OPO95684 399 aaKnown RBP19.56■□□□□ 0.72
IMP4-201ENST00000259239 GJB1P08034 283 aa19.56■□□□□ 0.72
IMP4-201ENST00000259239 GRK4P32298 578 aa19.56■□□□□ 0.72
IMP4-201ENST00000259239 ADAM9Q13443 819 aa19.56■□□□□ 0.72
IMP4-201ENST00000259239 MARCH8Q5T0T0 291 aa19.56■□□□□ 0.72
IMP4-201ENST00000259239 MTHFD1LQ6UB35 978 aa19.56■□□□□ 0.72
IMP4-201ENST00000259239 ANKRD20A12PQ8NF67 263 aa19.56■□□□□ 0.72
IMP4-201ENST00000259239 LMBR1Q8WVP7 490 aa19.56■□□□□ 0.72
IMP4-201ENST00000259239 HVCN1Q96D96 273 aa19.56■□□□□ 0.72
IMP4-201ENST00000259239 TMEM206Q9H813 350 aa19.56■□□□□ 0.72
IMP4-201ENST00000259239 SETD4Q9NVD3 440 aa19.56■□□□□ 0.72
IMP4-201ENST00000259239 INTS13Q9NVM9 706 aa19.56■□□□□ 0.72
IMP4-201ENST00000259239 TAB2Q9NYJ8 693 aa19.56■□□□□ 0.72
IMP4-201ENST00000259239 SUCLA2Q9P2R7 463 aaPredicted RBP19.56■□□□□ 0.72
IMP4-201ENST00000259239 HAS3O00219 553 aa19.55■□□□□ 0.72
IMP4-201ENST00000259239 MAGEB2O15479 319 aa19.55■□□□□ 0.72
IMP4-201ENST00000259239 NR3C1P04150 777 aa19.55■□□□□ 0.72
IMP4-201ENST00000259239 LAMTOR4Q0VGL1 99 aa19.55■□□□□ 0.72
IMP4-201ENST00000259239 HS2ST1Q7LGA3 356 aa19.55■□□□□ 0.72
IMP4-201ENST00000259239 TAS1R3Q7RTX0 852 aa19.55■□□□□ 0.72
IMP4-201ENST00000259239 MAP4K3Q8IVH8 894 aa19.55■□□□□ 0.72
IMP4-201ENST00000259239 LINC01465Q8N7H1 131 aa19.55■□□□□ 0.72
IMP4-201ENST00000259239 SPC24Q8NBT2 197 aa19.55■□□□□ 0.72
IMP4-201ENST00000259239 DEPTORQ8TB45 409 aa19.55■□□□□ 0.72
IMP4-201ENST00000259239 CEP63Q96MT8 703 aa19.55■□□□□ 0.72
IMP4-201ENST00000259239 CTAGE1Q96RT6 745 aa19.55■□□□□ 0.72
IMP4-201ENST00000259239 KATNAL1Q9BW62 490 aa19.55■□□□□ 0.72
IMP4-201ENST00000259239 AGPAT3Q9NRZ7 376 aa19.55■□□□□ 0.72
IMP4-201ENST00000259239 KCNG1Q9UIX4 513 aa19.55■□□□□ 0.72
IMP4-201ENST00000259239 DNAH12Q6ZR08 3092 aa19.55■□□□□ 0.72
IMP4-201ENST00000259239 A0A1B0GTH6 734 aa19.54■□□□□ 0.72
IMP4-201ENST00000259239 TISP43B9A030 160 aa19.54■□□□□ 0.72
IMP4-201ENST00000259239 H0YCG3 227 aa19.54■□□□□ 0.72
IMP4-201ENST00000259239 CDC25BP30305 580 aa19.54■□□□□ 0.72
IMP4-201ENST00000259239 DNM2P50570 870 aa19.54■□□□□ 0.72
IMP4-201ENST00000259239 COPB1P53618 953 aaKnown RBP19.54■□□□□ 0.72
IMP4-201ENST00000259239 MXD4Q14582 209 aaPredicted RBP19.54■□□□□ 0.72
IMP4-201ENST00000259239 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.54■□□□□ 0.72
IMP4-201ENST00000259239 RHPN2Q8IUC4 686 aa19.54■□□□□ 0.72
IMP4-201ENST00000259239 VPS16Q9H269 839 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms