RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 DCAF17Q5H9S7 520 aaPredicted RBP30.28■■■□□ 2.44
CCM2-201ENST00000258781 ATRIPQ8WXE1 791 aa30.28■■■□□ 2.44
CCM2-201ENST00000258781 GANQ9H2C0 597 aa30.28■■■□□ 2.44
CCM2-201ENST00000258781 GPRC5CQ9NQ84 441 aa30.28■■■□□ 2.44
CCM2-201ENST00000258781 MYO1AQ9UBC5 1043 aa30.28■■■□□ 2.44
CCM2-201ENST00000258781 TELO2Q9Y4R8 837 aa30.28■■■□□ 2.44
CCM2-201ENST00000258781 ECM2O94769 699 aaPredicted RBP30.27■■■□□ 2.44
CCM2-201ENST00000258781 SP4Q02446 784 aa30.27■■■□□ 2.44
CCM2-201ENST00000258781 DEFB115Q30KQ5 88 aa30.27■■■□□ 2.44
CCM2-201ENST00000258781 XKR3Q5GH77 459 aa30.27■■■□□ 2.44
CCM2-201ENST00000258781 CYFIP1Q7L576 1253 aa30.27■■■□□ 2.44
CCM2-201ENST00000258781 MCPH1Q8NEM0 835 aa30.27■■■□□ 2.44
CCM2-201ENST00000258781 IVNS1ABPQ9Y6Y0 642 aa30.27■■■□□ 2.44
CCM2-201ENST00000258781 SYNGAP1Q96PV0 1343 aa30.27■■■□□ 2.44
CCM2-201ENST00000258781 DGAT1O75907 488 aa30.27■■■□□ 2.44
CCM2-201ENST00000258781 TGFB3P10600 412 aa30.27■■■□□ 2.44
CCM2-201ENST00000258781 PEX3P56589 373 aa30.27■■■□□ 2.44
CCM2-201ENST00000258781 TCERG1LQ5VWI1 586 aa30.27■■■□□ 2.44
CCM2-201ENST00000258781 ABRAQ8N0Z2 381 aa30.27■■■□□ 2.44
CCM2-201ENST00000258781 CCDC42Q96M95 316 aa30.27■■■□□ 2.44
CCM2-201ENST00000258781 HAUS4Q9H6D7 363 aa30.27■■■□□ 2.44
CCM2-201ENST00000258781 ARHGAP20Q9P2F6 1191 aa30.27■■■□□ 2.44
CCM2-201ENST00000258781 STRNO43815 780 aa30.26■■■□□ 2.43
CCM2-201ENST00000258781 SLU7O95391 586 aaKnown RBP30.26■■■□□ 2.43
CCM2-201ENST00000258781 CYP2J2P51589 502 aa30.26■■■□□ 2.43
CCM2-201ENST00000258781 SMTNP53814 917 aa30.26■■■□□ 2.43
CCM2-201ENST00000258781 POLR2FP61218 127 aaKnown RBP30.26■■■□□ 2.43
CCM2-201ENST00000258781 GRB14Q14449 540 aa30.26■■■□□ 2.43
CCM2-201ENST00000258781 PPP2R5AQ15172 486 aa30.26■■■□□ 2.43
CCM2-201ENST00000258781 EXOC3L4Q17RC7 722 aa30.26■■■□□ 2.43
CCM2-201ENST00000258781 TRMT1LQ7Z2T5 733 aaKnown RBP30.26■■■□□ 2.43
CCM2-201ENST00000258781 SPIRE2Q8WWL2 714 aa30.26■■■□□ 2.43
CCM2-201ENST00000258781 CAPNS2Q96L46 248 aa30.26■■■□□ 2.43
CCM2-201ENST00000258781 ZFYVE28Q9HCC9 887 aa30.26■■■□□ 2.43
CCM2-201ENST00000258781 PDLIM7Q9NR12 457 aa30.26■■■□□ 2.43
CCM2-201ENST00000258781 SEPT9Q9UHD8 586 aaPredicted RBP30.26■■■□□ 2.43
CCM2-201ENST00000258781 MAFBQ9Y5Q3 323 aaPredicted RBP30.26■■■□□ 2.43
CCM2-201ENST00000258781 ZNF236Q9UL36 1845 aa30.26■■■□□ 2.43
CCM2-201ENST00000258781 UBA1P22314 1058 aaKnown RBP30.25■■■□□ 2.43
CCM2-201ENST00000258781 MAPK4P31152 587 aa30.25■■■□□ 2.43
CCM2-201ENST00000258781 RTP1P59025 263 aa30.25■■■□□ 2.43
CCM2-201ENST00000258781 NOGQ13253 232 aa30.25■■■□□ 2.43
CCM2-201ENST00000258781 DMP1Q13316 513 aaPredicted RBP30.25■■■□□ 2.43
CCM2-201ENST00000258781 NEDD9Q14511 834 aa30.25■■■□□ 2.43
CCM2-201ENST00000258781 ZNF792Q3KQV3 632 aa30.25■■■□□ 2.43
CCM2-201ENST00000258781 GBP6Q6ZN66 633 aa30.25■■■□□ 2.43
CCM2-201ENST00000258781 EEPD1Q7L9B9 569 aa30.25■■■□□ 2.43
CCM2-201ENST00000258781 CYP26B1Q9NR63 512 aa30.25■■■□□ 2.43
CCM2-201ENST00000258781 SLC16A4O15374 487 aa30.25■■■□□ 2.43
CCM2-201ENST00000258781 DPY19L2P1Q6NXN4 242 aa30.25■■■□□ 2.43
CCM2-201ENST00000258781 NLRC4Q9NPP4 1024 aa30.25■■■□□ 2.43
CCM2-201ENST00000258781 ZNF302Q9NR11 478 aa30.25■■■□□ 2.43
CCM2-201ENST00000258781 IGKV6D-21A0A0A0MT36 114 aa30.24■■■□□ 2.43
CCM2-201ENST00000258781 SFMBT2Q5VUG0 894 aa30.24■■■□□ 2.43
CCM2-201ENST00000258781 PLEKHH3Q7Z736 793 aa30.24■■■□□ 2.43
CCM2-201ENST00000258781 NTPCRQ9BSD7 190 aaKnown RBP30.24■■■□□ 2.43
CCM2-201ENST00000258781 IRX2Q9BZI1 471 aaPredicted RBP30.24■■■□□ 2.43
CCM2-201ENST00000258781 EXOC7Q9UPT5 735 aa30.24■■■□□ 2.43
CCM2-201ENST00000258781 LOC102724159A0A0B4J2E5 919 aa30.23■■■□□ 2.43
CCM2-201ENST00000258781 SSU72P8A0A1W2PR75 194 aa30.23■■■□□ 2.43
CCM2-201ENST00000258781 EXOC3O60645 756 aa30.23■■■□□ 2.43
CCM2-201ENST00000258781 LCA5LO95447 670 aa30.23■■■□□ 2.43
CCM2-201ENST00000258781 PON1P27169 355 aa30.23■■■□□ 2.43
CCM2-201ENST00000258781 MAPK8IP2Q13387 824 aaPredicted RBP30.23■■■□□ 2.43
CCM2-201ENST00000258781 PWP2Q15269 919 aaKnown RBP30.23■■■□□ 2.43
CCM2-201ENST00000258781 ERO1AQ96HE7 468 aa30.23■■■□□ 2.43
CCM2-201ENST00000258781 ATP6V0A4Q9HBG4 840 aa30.23■■■□□ 2.43
CCM2-201ENST00000258781 FBXL5Q9UKA1 691 aa30.23■■■□□ 2.43
CCM2-201ENST00000258781 SORBS3O60504 671 aa30.23■■■□□ 2.43
CCM2-201ENST00000258781 URI1O94763 535 aaPredicted RBP30.23■■■□□ 2.43
CCM2-201ENST00000258781 FARP2O94887 1054 aaPredicted RBP30.23■■■□□ 2.43
CCM2-201ENST00000258781 NPTX2P47972 431 aa30.23■■■□□ 2.43
CCM2-201ENST00000258781 KCNV1Q6PIU1 500 aa30.23■■■□□ 2.43
CCM2-201ENST00000258781 KIAA1328Q86T90 577 aa30.23■■■□□ 2.43
CCM2-201ENST00000258781 TMEM161BQ8NDZ6 487 aa30.23■■■□□ 2.43
CCM2-201ENST00000258781 MORC4Q8TE76 937 aa30.23■■■□□ 2.43
CCM2-201ENST00000258781 PLEKP08567 350 aaPredicted RBP30.22■■■□□ 2.43
CCM2-201ENST00000258781 EIF4A3P38919 411 aaKnown RBP30.22■■■□□ 2.43
CCM2-201ENST00000258781 SPA17Q15506 151 aa30.22■■■□□ 2.43
CCM2-201ENST00000258781 ZNF569Q5MCW4 686 aa30.22■■■□□ 2.43
CCM2-201ENST00000258781 KLHDC7AQ5VTJ3 777 aa30.22■■■□□ 2.43
CCM2-201ENST00000258781 ZNF215Q9UL58 517 aaPredicted RBP30.22■■■□□ 2.43
CCM2-201ENST00000258781 MYO6Q9UM54 1294 aa30.22■■■□□ 2.43
CCM2-201ENST00000258781 CENPFP49454 3210 aa30.21■■■□□ 2.43
CCM2-201ENST00000258781 CA12O43570 354 aa30.21■■■□□ 2.43
CCM2-201ENST00000258781 OATP04181 439 aa30.21■■■□□ 2.43
CCM2-201ENST00000258781 SERPING1P05155 500 aa30.21■■■□□ 2.43
CCM2-201ENST00000258781 SLC9A1P19634 815 aa30.21■■■□□ 2.43
CCM2-201ENST00000258781 XPNPEP1Q9NQW7 623 aa30.21■■■□□ 2.43
CCM2-201ENST00000258781 ZSWIM8A7E2V4 1837 aa30.21■■■□□ 2.43
CCM2-201ENST00000258781 MGAMO43451 1857 aa30.21■■■□□ 2.43
CCM2-201ENST00000258781 CCDC169A6NNP5 214 aa30.21■■■□□ 2.43
CCM2-201ENST00000258781 MAPK13O15264 365 aa30.21■■■□□ 2.43
CCM2-201ENST00000258781 KIF11P52732 1056 aa30.21■■■□□ 2.43
CCM2-201ENST00000258781 SLC9C1Q4G0N8 1177 aa30.21■■■□□ 2.43
CCM2-201ENST00000258781 HGSNATQ68CP4 663 aa30.21■■■□□ 2.43
CCM2-201ENST00000258781 MAP4K3Q8IVH8 894 aa30.21■■■□□ 2.43
CCM2-201ENST00000258781 FBXO16Q8IX29 292 aaPredicted RBP30.21■■■□□ 2.43
CCM2-201ENST00000258781 TSC1Q92574 1164 aa30.21■■■□□ 2.43
CCM2-201ENST00000258781 DEF6Q9H4E7 631 aa30.21■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms