RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 GOLGA6L1Q8N7Z2 621 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 AGBL3Q8NEM8 1001 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 UBE2Q2Q8WVN8 375 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 BSNDQ8WZ55 320 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 TEPSINQ96N21 525 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 HSD17B14Q9BPX1 270 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 FAM49AQ9H0Q0 323 aaPredicted RBP9.89□□□□□ -0.83
CKAP2-201ENST00000258607 KCTD10Q9H3F6 313 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 hCG_1984214I3L0E3 225 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 RARRES1P49788 294 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 LIG4P49917 911 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 SP2Q02086 613 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 PRKCEQ02156 737 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 TRIM14Q14142 442 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 C8orf74Q6P047 294 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 PEX26Q7Z412 305 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 MAATS1Q7Z4T9 603 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 ARHGEF19Q8IW93 802 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 ZNF713Q8N859 430 aaPredicted RBP9.89□□□□□ -0.83
CKAP2-201ENST00000258607 OR2W6PQ8NHA6 318 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 HAUS1Q96CS2 278 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 CEP89Q96ST8 783 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 NAA15Q9BXJ9 866 aaKnown RBP9.89□□□□□ -0.83
CKAP2-201ENST00000258607 L2HGDHQ9H9P8 463 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 EPB41L5Q9HCM4 733 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 PDGFCQ9NRA1 345 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 NFU1Q9UMS0 254 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 MYO3BQ8WXR4 1341 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 TIAM2Q8IVF5 1701 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 CDH23Q9H251 3354 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 SBF2Q86WG5 1849 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 LRRC10BA6NIK2 292 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 RGL2O15211 777 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 ZNF862O60290 1169 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 ZEB2O60315 1214 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 DMP1Q13316 513 aaPredicted RBP9.89□□□□□ -0.83
CKAP2-201ENST00000258607 DCAF15Q66K64 600 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 FAM160B2Q86V87 743 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 TRIM59Q8IWR1 403 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 DAW1Q8N136 415 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 CLEC4DQ8WXI8 215 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 SLC35C1Q96A29 364 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 FNBP1Q96RU3 617 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 PSMD1Q99460 953 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 ANKZF1Q9H8Y5 726 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 PLAGL2Q9UPG8 496 aa9.89□□□□□ -0.83
CKAP2-201ENST00000258607 PHF20L1A8MW92 1017 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 GGPS1O95749 300 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 RHPN2Q8IUC4 686 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 SH2D3CQ8N5H7 860 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 CEP112Q8N8E3 955 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 CEP120Q8N960 986 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 TATDN2Q93075 761 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 RUFY1Q96T51 708 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 DNAJC7Q99615 494 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 NUP58Q9BVL2 599 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 HEMGNQ9BXL5 484 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 PXMP2Q9NR77 195 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 DDX41Q9UJV9 622 aaKnown RBP9.88□□□□□ -0.83
CKAP2-201ENST00000258607 KIAA1551Q9HCM1 1747 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 ANKRD31Q8N7Z5 1873 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 TTLL13PA6NNM8 815 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 P4HBP07237 508 aaKnown RBP9.88□□□□□ -0.83
CKAP2-201ENST00000258607 ITGA4P13612 1032 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 MXI1P50539 228 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 TFAMQ00059 246 aaKnown RBP9.88□□□□□ -0.83
CKAP2-201ENST00000258607 KAZNQ674X7 775 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 C1orf186Q6ZWK4 172 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 ANO5Q75V66 913 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 ZNF720Q7Z2F6 126 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 SESTD1Q86VW0 696 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 CPA5Q8WXQ8 436 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 BAP1Q92560 729 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 OSBPL9Q96SU4 736 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 TRIM7Q9C029 511 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 POLR3FQ9H1D9 316 aaPredicted RBP9.88□□□□□ -0.83
CKAP2-201ENST00000258607 RANBP17Q9H2T7 1088 aaKnown RBP9.88□□□□□ -0.83
CKAP2-201ENST00000258607 TYW1Q9NV66 732 aaKnown RBP9.88□□□□□ -0.83
CKAP2-201ENST00000258607 HSPBP1Q9NZL4 362 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 WNK3Q9BYP7 1800 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 H3BQF6 201 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 WDR46O15213 610 aaKnown RBP9.88□□□□□ -0.83
CKAP2-201ENST00000258607 ATP2C2O75185 946 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 CLCN3P51790 818 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 ACTR2P61160 394 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 PRAMEF19Q5SWL8 479 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 SCYL3Q8IZE3 742 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.88□□□□□ -0.83
CKAP2-201ENST00000258607 CCDC33Q8N5R6 958 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 TTC16Q8NEE8 873 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 TAS1R2Q8TE23 839 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 RABGGTAQ92696 567 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 THAP2Q9H0W7 228 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 SLC38A10Q9HBR0 1119 aa9.88□□□□□ -0.83
CKAP2-201ENST00000258607 XIRP2A4UGR9 3374 aa9.87□□□□□ -0.83
CKAP2-201ENST00000258607 MYH11P35749 1972 aa9.87□□□□□ -0.83
CKAP2-201ENST00000258607 BUB1BO60566 1050 aaPredicted RBP9.87□□□□□ -0.83
CKAP2-201ENST00000258607 MAP3K6O95382 1288 aa9.87□□□□□ -0.83
CKAP2-201ENST00000258607 ADRB2P07550 413 aa9.87□□□□□ -0.83
CKAP2-201ENST00000258607 CD19P15391 556 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms