RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 RFC4P35249 363 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 HSD17B4P51659 736 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 SARNPP82979 210 aaKnown RBP4.49□□□□□ -1.69
UBE4A-201ENST00000252108 PPATQ06203 517 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 ACTN3Q08043 901 aaPredicted RBP4.49□□□□□ -1.69
UBE4A-201ENST00000252108 COASYQ13057 564 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 MFSD14BQ5SR56 506 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 C1orf186Q6ZWK4 172 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 SLC9A9Q8IVB4 645 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 TEX11Q8IYF3 940 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 SYT2Q8N9I0 419 aaPredicted RBP4.49□□□□□ -1.69
UBE4A-201ENST00000252108 PRPF38AQ8NAV1 312 aaKnown RBP4.49□□□□□ -1.69
UBE4A-201ENST00000252108 REPS2Q8NFH8 660 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 NEK9Q8TD19 979 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 SGSM3Q96HU1 749 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 RBM17Q96I25 401 aaKnown RBP4.49□□□□□ -1.69
UBE4A-201ENST00000252108 KRT12Q99456 494 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 PSMD1Q99460 953 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 POLR3CQ9BUI4 534 aaPredicted RBP4.49□□□□□ -1.69
UBE4A-201ENST00000252108 KDM4CQ9H3R0 1056 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 ST6GALNAC4Q9H4F1 302 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 ZHX3Q9H4I2 956 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 TXLNGQ9NUQ3 528 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 ARMCX3Q9UH62 379 aaPredicted RBP4.49□□□□□ -1.69
UBE4A-201ENST00000252108 LCMT1Q9UIC8 334 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 ADAMTS5Q9UNA0 930 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 MTMR7Q9Y216 660 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 NCANO14594 1321 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 MOCS3O95396 460 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 ELF1P32519 619 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 HSPA9P38646 679 aaKnown RBP4.49□□□□□ -1.69
UBE4A-201ENST00000252108 PTGER2P43116 358 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 SSR1P43307 286 aaKnown RBP4.49□□□□□ -1.69
UBE4A-201ENST00000252108 RHOT2Q8IXI1 618 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 IQCKQ8N0W5 287 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 PPFIBP2Q8ND30 876 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 SCFD2Q8WU76 684 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 CENPTQ96BT3 561 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.49□□□□□ -1.693e-6■■■■■ 27.7
UBE4A-201ENST00000252108 PPCSQ9HAB8 311 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 PPANQ9NQ55 473 aaKnown RBP4.49□□□□□ -1.69
UBE4A-201ENST00000252108 SPATS2LQ9NUQ6 558 aaKnown RBP4.49□□□□□ -1.69
UBE4A-201ENST00000252108 ABT1Q9ULW3 272 aaKnown RBP4.49□□□□□ -1.69
UBE4A-201ENST00000252108 PLAAQ9Y263 795 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 PASKQ96RG2 1323 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 A0A0A6YYK5 440 aaPredicted RBP4.49□□□□□ -1.69
UBE4A-201ENST00000252108 HIP1RO75146 1068 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 VIMP08670 466 aaKnown RBP4.49□□□□□ -1.69
UBE4A-201ENST00000252108 XRCC5P13010 732 aaKnown RBP4.49□□□□□ -1.69
UBE4A-201ENST00000252108 NPR1P16066 1061 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 TNFAIP3P21580 790 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 RPA1P27694 616 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 PSMC6P62333 389 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 PDCLQ13371 301 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 MEI1Q5TIA1 1274 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 LRCH2Q5VUJ6 765 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 PPP1R21Q6ZMI0 780 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 C12orf56Q8IXR9 622 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 FBXO41Q8TF61 875 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 SLC35C1Q96A29 364 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 CCT8L2Q96SF2 557 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 DNAI2Q9GZS0 605 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.49□□□□□ -1.69
UBE4A-201ENST00000252108 KLHL14Q9P2G3 628 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 LARSQ9P2J5 1176 aaKnown RBP4.49□□□□□ -1.69
UBE4A-201ENST00000252108 HDAC6Q9UBN7 1215 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 PLXNB2O15031 1838 aa4.49□□□□□ -1.69
UBE4A-201ENST00000252108 SYNGAP1Q96PV0 1343 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 UFL1O94874 794 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 AGTP01019 485 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 HLA-DOAP06340 250 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 ATP1A2P50993 1020 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 RASSF7Q02833 373 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 NAB2Q15742 525 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 SLC18A3Q16572 532 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 GPATCH4Q5T3I0 446 aaKnown RBP4.48□□□□□ -1.69
UBE4A-201ENST00000252108 FKBP1CQ5VVH2 108 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 TCERG1LQ5VWI1 586 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 KLHL7Q8IXQ5 586 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 TEX9Q8N6V9 391 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 SLC17A8Q8NDX2 589 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.48□□□□□ -1.69
UBE4A-201ENST00000252108 CHMP6Q96FZ7 201 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 GDAP1L1Q96MZ0 367 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 ROPN1BQ9BZX4 212 aaPredicted RBP4.48□□□□□ -1.69
UBE4A-201ENST00000252108 ROPN1Q9HAT0 212 aaPredicted RBP4.48□□□□□ -1.69
UBE4A-201ENST00000252108 INTS9Q9NV88 658 aaKnown RBP4.48□□□□□ -1.69
UBE4A-201ENST00000252108 MAPK8IP1Q9UQF2 711 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 FRMD4BQ9Y2L6 1034 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 USP17L10C9JJH3 530 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 EML1O00423 815 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 GRIN3BO60391 1043 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 ENTPD3O75355 529 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 LYPLA2O95372 231 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 GAS8O95995 478 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 AFPP02771 609 aaKnown RBP4.48□□□□□ -1.69
UBE4A-201ENST00000252108 AP3B2Q13367 1082 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 RBBP5Q15291 538 aaKnown RBP4.48□□□□□ -1.69
UBE4A-201ENST00000252108 SYDE1Q6ZW31 735 aaPredicted RBP4.48□□□□□ -1.69
UBE4A-201ENST00000252108 PODNQ7Z5L7 613 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms